RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 LTAP01374 205 aa10.58□□□□□ -0.72
CLDN11-204ENST00000477531 S100A9P06702 114 aaKnown RBP10.58□□□□□ -0.72
CLDN11-204ENST00000477531 NKX2-5P52952 324 aaPredicted RBP10.58□□□□□ -0.72
CLDN11-204ENST00000477531 ZNF674Q2M3X9 581 aa10.58□□□□□ -0.72
CLDN11-204ENST00000477531 Q9HAA7 133 aa10.58□□□□□ -0.72
CLDN11-204ENST00000477531 A0A087WWC5 75 aa10.57□□□□□ -0.72
CLDN11-204ENST00000477531 TMSB15BA0A087X1C1 80 aa10.57□□□□□ -0.72
CLDN11-204ENST00000477531 FAM74A4Q5TZK3 123 aa10.57□□□□□ -0.72
CLDN11-204ENST00000477531 Q6ZSN1 163 aa10.57□□□□□ -0.72
CLDN11-204ENST00000477531 TM2D2Q9BX73 214 aa10.57□□□□□ -0.72
CLDN11-204ENST00000477531 JPT2Q9H910 190 aa10.57□□□□□ -0.72
CLDN11-204ENST00000477531 ABCA13Q86UQ4 5058 aa10.56□□□□□ -0.72
CLDN11-204ENST00000477531 M0R381 172 aa10.56□□□□□ -0.72
CLDN11-204ENST00000477531 LINC01559Q495D7 138 aa10.56□□□□□ -0.72
CLDN11-204ENST00000477531 ZFP82Q8N141 532 aa10.56□□□□□ -0.72
CLDN11-204ENST00000477531 MBD3L1Q8WWY6 194 aa10.56□□□□□ -0.72
CLDN11-204ENST00000477531 SAMD10Q9BYL1 202 aa10.56□□□□□ -0.72
CLDN11-204ENST00000477531 A0A1B0GV50 99 aa10.55□□□□□ -0.72
CLDN11-204ENST00000477531 GCSHP23434 173 aa10.55□□□□□ -0.72
CLDN11-204ENST00000477531 LAGE3Q14657 143 aa10.55□□□□□ -0.72
CLDN11-204ENST00000477531 TOR2AQ5JU69 321 aa10.55□□□□□ -0.72
CLDN11-204ENST00000477531 UFSP1Q6NVU6 142 aa10.55□□□□□ -0.72
CLDN11-204ENST00000477531 C14orf178Q8N769 122 aaPredicted RBP10.55□□□□□ -0.72
CLDN11-204ENST00000477531 IGLV5-52A0A0A0MRZ9 124 aa10.54□□□□□ -0.72
CLDN11-204ENST00000477531 H2AFB1P0C5Y9 115 aa10.54□□□□□ -0.72
CLDN11-204ENST00000477531 RAB5CP51148 216 aa10.54□□□□□ -0.72
CLDN11-204ENST00000477531 NTN5Q8WTR8 489 aaPredicted RBP10.54□□□□□ -0.72
CLDN11-204ENST00000477531 SFRP2Q96HF1 295 aa10.54□□□□□ -0.72
CLDN11-204ENST00000477531 URGCP-MRPS24S4R325 110 aa10.54□□□□□ -0.72
CLDN11-204ENST00000477531 A0A087WWL8 130 aa10.53□□□□□ -0.72
CLDN11-204ENST00000477531 TRAV8-3A0A0A6YYJ7 113 aa10.53□□□□□ -0.72
CLDN11-204ENST00000477531 EPM2AB3EWF7 344 aa10.53□□□□□ -0.72
CLDN11-204ENST00000477531 LINC00694P0DN24 101 aa10.53□□□□□ -0.72
CLDN11-204ENST00000477531 BAGE2Q86Y30 109 aa10.53□□□□□ -0.72
CLDN11-204ENST00000477531 SCO2A0A1W2PP80 73 aa10.52□□□□□ -0.73
CLDN11-204ENST00000477531 LRCOL1A6NCL2 159 aa10.52□□□□□ -0.73
CLDN11-204ENST00000477531 KRTAP10-1P60331 282 aa10.52□□□□□ -0.73
CLDN11-204ENST00000477531 KCNIP4Q6PIL6 250 aa10.52□□□□□ -0.73
CLDN11-204ENST00000477531 TRBV10-1A0A0K0K1A3 114 aa10.51□□□□□ -0.73
CLDN11-204ENST00000477531 TEX46H3BTG2 121 aa10.51□□□□□ -0.73
CLDN11-204ENST00000477531 RPL36AP83881 106 aaKnown RBP10.51□□□□□ -0.73
CLDN11-204ENST00000477531 RPL36ALQ969Q0 106 aaKnown RBP10.51□□□□□ -0.73
CLDN11-204ENST00000477531 Q9UF83 564 aa10.51□□□□□ -0.73
CLDN11-204ENST00000477531 CXCL1P09341 107 aa10.5□□□□□ -0.73
CLDN11-204ENST00000477531 SULT1A2P50226 295 aa10.5□□□□□ -0.73
CLDN11-204ENST00000477531 XGP55808 180 aa10.5□□□□□ -0.73
CLDN11-204ENST00000477531 Q8N814 137 aa10.5□□□□□ -0.73
CLDN11-204ENST00000477531 RMI2Q96E14 147 aa10.5□□□□□ -0.73
CLDN11-204ENST00000477531 COX11Q9Y6N1 276 aa10.5□□□□□ -0.73
CLDN11-204ENST00000477531 PRR27Q6MZM9 219 aa10.49□□□□□ -0.73
CLDN11-204ENST00000477531 DAZ4Q86SG3 579 aaKnown RBP10.49□□□□□ -0.73
CLDN11-204ENST00000477531 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.49□□□□□ -0.73
CLDN11-204ENST00000477531 FRZBQ92765 325 aa10.49□□□□□ -0.73
CLDN11-204ENST00000477531 MANBALQ9NQG1 85 aa10.49□□□□□ -0.73
CLDN11-204ENST00000477531 DAZ3Q9NR90 486 aaKnown RBP10.49□□□□□ -0.73
CLDN11-204ENST00000477531 TRBV7-3A0A075B6L6 115 aa10.48□□□□□ -0.73
CLDN11-204ENST00000477531 A0A087WX48 190 aa10.48□□□□□ -0.73
CLDN11-204ENST00000477531 RAB4BP61018 213 aa10.48□□□□□ -0.73
CLDN11-204ENST00000477531 RPL19P84098 196 aaKnown RBP10.48□□□□□ -0.73
CLDN11-204ENST00000477531 ELOBQ15370 118 aa10.48□□□□□ -0.73
CLDN11-204ENST00000477531 SPANXN1Q5VSR9 72 aa10.48□□□□□ -0.73
CLDN11-204ENST00000477531 Q8N3U1 123 aa10.48□□□□□ -0.73
CLDN11-204ENST00000477531 MLST8Q9BVC4 326 aa10.48□□□□□ -0.73
CLDN11-204ENST00000477531 GNG13Q9P2W3 67 aa10.48□□□□□ -0.73
CLDN11-204ENST00000477531 RPL35P42766 123 aaKnown RBP10.47□□□□□ -0.73
CLDN11-204ENST00000477531 ZNF56Q15929 161 aa10.47□□□□□ -0.73
CLDN11-204ENST00000477531 ALKAL2Q6UX46 152 aa10.47□□□□□ -0.73
CLDN11-204ENST00000477531 SMIM17P0DL12 118 aa10.46□□□□□ -0.73
CLDN11-204ENST00000477531 NIT1Q86X76 327 aa10.46□□□□□ -0.73
CLDN11-204ENST00000477531 OR10AG1Q8NH19 301 aa10.46□□□□□ -0.73
CLDN11-204ENST00000477531 DAZAP1Q96EP5 407 aaKnown RBP10.46□□□□□ -0.73
CLDN11-204ENST00000477531 TMEM70Q9BUB7 260 aa10.46□□□□□ -0.73
CLDN11-204ENST00000477531 CHCHD7Q9BUK0 85 aa10.46□□□□□ -0.73
CLDN11-204ENST00000477531 FAT1Q14517 4588 aa10.46□□□□□ -0.74
CLDN11-204ENST00000477531 TMEM262E9PQX1 116 aa10.45□□□□□ -0.74
CLDN11-204ENST00000477531 F5H697 171 aa10.45□□□□□ -0.74
CLDN11-204ENST00000477531 SNAI2O43623 268 aa10.45□□□□□ -0.74
CLDN11-204ENST00000477531 OR5AL1P0C617 328 aa10.45□□□□□ -0.74
CLDN11-204ENST00000477531 UBE2D3P61077 147 aa10.45□□□□□ -0.74
CLDN11-204ENST00000477531 UBE2D2P62837 147 aa10.45□□□□□ -0.74
CLDN11-204ENST00000477531 SSBP4Q9BWG4 385 aaPredicted RBP10.45□□□□□ -0.74
CLDN11-204ENST00000477531 KLK12Q9UKR0 248 aa10.45□□□□□ -0.74
CLDN11-204ENST00000477531 IGKV2D-24A0A075B6R9 120 aa10.44□□□□□ -0.74
CLDN11-204ENST00000477531 TRAV1-1A0A0B4J248 108 aa10.44□□□□□ -0.74
CLDN11-204ENST00000477531 SSTP61278 116 aa10.44□□□□□ -0.74
CLDN11-204ENST00000477531 BLOC1S1P78537 153 aa10.44□□□□□ -0.74
CLDN11-204ENST00000477531 Q5VSD8 79 aa10.44□□□□□ -0.74
CLDN11-204ENST00000477531 TEX261Q6UWH6 196 aa10.44□□□□□ -0.74
CLDN11-204ENST00000477531 OR10G8Q8NGN5 311 aa10.44□□□□□ -0.74
CLDN11-204ENST00000477531 MUC21A0A0G2JKD1 596 aa10.43□□□□□ -0.74
CLDN11-204ENST00000477531 MUC21A0A140T8X8 626 aa10.43□□□□□ -0.74
CLDN11-204ENST00000477531 FAM229AH3BQW9 127 aa10.43□□□□□ -0.74
CLDN11-204ENST00000477531 LECT2O14960 151 aa10.43□□□□□ -0.74
CLDN11-204ENST00000477531 IFNA1P01562 189 aa10.43□□□□□ -0.74
CLDN11-204ENST00000477531 CCL20P78556 96 aa10.43□□□□□ -0.74
CLDN11-204ENST00000477531 C11orf52Q96A22 123 aa10.43□□□□□ -0.74
CLDN11-204ENST00000477531 UBE2WQ96B02 151 aa10.43□□□□□ -0.74
CLDN11-204ENST00000477531 RBFOX3A6NFN3 312 aa10.42□□□□□ -0.74
CLDN11-204ENST00000477531 SMR3BP02814 79 aaPredicted RBP10.42□□□□□ -0.74
CLDN11-204ENST00000477531 INAFM2P0DMQ5 153 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms