RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 ARL6IP6Q8N6S5 226 aa4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 OR11H4Q8NGC9 324 aa4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 PPP1R1CQ8WVI7 109 aa4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 RPL36ALQ969Q0 106 aaKnown RBP4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 PTH2Q96A98 100 aa4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 CHCHD5Q9BSY4 110 aa4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 PHLDA3Q9Y5J5 127 aa4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 UBR4Q5T4S7 5183 aa4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 LRP1Q07954 4544 aaKnown RBP4.31□□□□□ -1.72
RTFDC1-206ENST00000477485 TMSB15BA0A087X1C1 80 aa4.31□□□□□ -1.72
RTFDC1-206ENST00000477485 IGKV3D-20A0A0C4DH25 116 aa4.31□□□□□ -1.72
RTFDC1-206ENST00000477485 FABP5P3A8MUU1 101 aa4.31□□□□□ -1.72
RTFDC1-206ENST00000477485 SSNA1O43805 119 aa4.31□□□□□ -1.72
RTFDC1-206ENST00000477485 IFNA7P01567 189 aa4.31□□□□□ -1.72
RTFDC1-206ENST00000477485 TPT1P13693 172 aaKnown RBP4.31□□□□□ -1.72
RTFDC1-206ENST00000477485 ZNF56Q15929 161 aa4.31□□□□□ -1.72
RTFDC1-206ENST00000477485 MPV17L2Q567V2 206 aa4.31□□□□□ -1.72
RTFDC1-206ENST00000477485 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.31□□□□□ -1.72
RTFDC1-206ENST00000477485 HSD17B11Q8NBQ5 300 aa4.31□□□□□ -1.72
RTFDC1-206ENST00000477485 LINC00479Q96M42 142 aa4.31□□□□□ -1.72
RTFDC1-206ENST00000477485 CHCHD7Q9BUK0 85 aa4.31□□□□□ -1.72
RTFDC1-206ENST00000477485 EPDR1Q9UM22 224 aa4.31□□□□□ -1.72
RTFDC1-206ENST00000477485 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.31□□□□□ -1.72
RTFDC1-206ENST00000477485 MPC2O95563 127 aa4.3□□□□□ -1.72
RTFDC1-206ENST00000477485 PTTG1O95997 202 aa4.3□□□□□ -1.72
RTFDC1-206ENST00000477485 PRSS1P07477 247 aa4.3□□□□□ -1.72
RTFDC1-206ENST00000477485 ARMS2P0C7Q2 107 aa4.3□□□□□ -1.72
RTFDC1-206ENST00000477485 GCHFRP30047 84 aa4.3□□□□□ -1.72
RTFDC1-206ENST00000477485 ATRAIDQ6UW56 229 aa4.3□□□□□ -1.72
RTFDC1-206ENST00000477485 ENHOQ6UWT2 76 aa4.3□□□□□ -1.72
RTFDC1-206ENST00000477485 Q6ZRU5 148 aa4.3□□□□□ -1.72
RTFDC1-206ENST00000477485 CCDC32Q9BV29 185 aa4.3□□□□□ -1.72
RTFDC1-206ENST00000477485 IL36BQ9NZH7 164 aa4.3□□□□□ -1.72
RTFDC1-206ENST00000477485 ARL2-SNX15V9GYD0 113 aa4.3□□□□□ -1.72
RTFDC1-206ENST00000477485 TRBV7-3A0A075B6L6 115 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 hDV102S1A0JD36 115 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 PANO1I0J062 215 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 CXorf1O96002 111 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 STAG3L2P0CL84 134 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 STAG3L3P0CL85 134 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 MT1HL1P0DM35 61 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 H2BFSP57053 126 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 DEFA3P59666 94 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 UBE2G2P60604 165 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 UBE2D3P61077 147 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 UBE2D2P62837 147 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 MIAQ16674 131 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 PIK3CD-AS1Q5SR53 167 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 DGAT2L7PQ6IED9 249 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 UFSP1Q6NVU6 142 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 Q86TA4 180 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 RAB24Q969Q5 203 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 WFDC1Q9HC57 220 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 TMEM167BQ9NRX6 74 aa4.29□□□□□ -1.72
RTFDC1-206ENST00000477485 IGLV10-54A0A075B6I4 117 aa4.28□□□□□ -1.72
RTFDC1-206ENST00000477485 TRBV6-8A0A0A6YYG3 113 aa4.28□□□□□ -1.72
RTFDC1-206ENST00000477485 KRBOX1C9JBD0 128 aa4.28□□□□□ -1.72
RTFDC1-206ENST00000477485 F5H697 171 aa4.28□□□□□ -1.72
RTFDC1-206ENST00000477485 INMT-MINDY4F8WBC2 141 aa4.28□□□□□ -1.72
RTFDC1-206ENST00000477485 SH2D1AO60880 128 aa4.28□□□□□ -1.72
RTFDC1-206ENST00000477485 CHTF8P0CG12 524 aa4.28□□□□□ -1.72
RTFDC1-206ENST00000477485 SSTP61278 116 aa4.28□□□□□ -1.72
RTFDC1-206ENST00000477485 UBE2G1P62253 170 aa4.28□□□□□ -1.72
RTFDC1-206ENST00000477485 RPL19P84098 196 aaKnown RBP4.28□□□□□ -1.72
RTFDC1-206ENST00000477485 GAGE6Q13070 117 aa4.28□□□□□ -1.72
RTFDC1-206ENST00000477485 ZFP82Q8N141 532 aa4.28□□□□□ -1.72
RTFDC1-206ENST00000477485 C9orf163Q8N9P6 203 aa4.28□□□□□ -1.72
RTFDC1-206ENST00000477485 SFRP2Q96HF1 295 aa4.28□□□□□ -1.72
RTFDC1-206ENST00000477485 ACTR3CQ9C0K3 210 aaPredicted RBP4.28□□□□□ -1.72
RTFDC1-206ENST00000477485 AP5S1Q9NUS5 200 aa4.28□□□□□ -1.72
RTFDC1-206ENST00000477485 HMCN2Q8NDA2 5059 aa4.27□□□□□ -1.73
RTFDC1-206ENST00000477485 IGHV3-64A0A075B6Q5 118 aa4.27□□□□□ -1.73
RTFDC1-206ENST00000477485 TRBV10-1A0A0K0K1A3 114 aa4.27□□□□□ -1.73
RTFDC1-206ENST00000477485 PEX7O00628 323 aa4.27□□□□□ -1.73
RTFDC1-206ENST00000477485 MBP02144 154 aa4.27□□□□□ -1.73
RTFDC1-206ENST00000477485 RAB5CP51148 216 aa4.27□□□□□ -1.73
RTFDC1-206ENST00000477485 PKIAP61925 76 aa4.27□□□□□ -1.73
RTFDC1-206ENST00000477485 ODF1Q14990 250 aa4.27□□□□□ -1.73
RTFDC1-206ENST00000477485 FAM162BQ5T6X4 162 aa4.27□□□□□ -1.73
RTFDC1-206ENST00000477485 LINC00269Q8N2A0 174 aa4.27□□□□□ -1.73
RTFDC1-206ENST00000477485 C7orf33Q8WU49 177 aa4.27□□□□□ -1.73
RTFDC1-206ENST00000477485 DNAH8Q96JB1 4490 aa4.26□□□□□ -1.73
RTFDC1-206ENST00000477485 A0A087WYN8 130 aa4.26□□□□□ -1.73
RTFDC1-206ENST00000477485 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.26□□□□□ -1.73
RTFDC1-206ENST00000477485 MUC21A0A0G2JKD1 596 aa4.26□□□□□ -1.73
RTFDC1-206ENST00000477485 MUC21A0A140T8X8 626 aa4.26□□□□□ -1.73
RTFDC1-206ENST00000477485 PHOX2AO14813 284 aa4.26□□□□□ -1.73
RTFDC1-206ENST00000477485 ATP6V0CP27449 155 aa4.26□□□□□ -1.73
RTFDC1-206ENST00000477485 RAB4BP61018 213 aa4.26□□□□□ -1.73
RTFDC1-206ENST00000477485 RBX1P62877 108 aa4.26□□□□□ -1.73
RTFDC1-206ENST00000477485 SDIM1Q6ZPB5 146 aa4.26□□□□□ -1.73
RTFDC1-206ENST00000477485 NEXN-AS1Q8NBZ9 246 aa4.26□□□□□ -1.73
RTFDC1-206ENST00000477485 GTSF1Q8WW33 167 aa4.26□□□□□ -1.73
RTFDC1-206ENST00000477485 DERL1Q9BUN8 251 aa4.26□□□□□ -1.73
RTFDC1-206ENST00000477485 TRBV25-1A0A075B6N4 114 aa4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 IGKV2-24A0A0C4DH68 120 aa4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 A0A1W2PRE2 83 aa4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 MGPP08493 103 aa4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 SMIM17P0DL12 118 aa4.25□□□□□ -1.73
RTFDC1-206ENST00000477485 CRIP1P50238 77 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms