RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 NUTF2P61970 127 aaKnown RBP12.3□□□□□ -0.44
EPHB4-204ENST00000477446 LBHQ53QV2 105 aaPredicted RBP12.3□□□□□ -0.44
EPHB4-204ENST00000477446 MUC21Q5SSG8 566 aa12.3□□□□□ -0.44
EPHB4-204ENST00000477446 PRR9Q5T870 116 aa12.3□□□□□ -0.44
EPHB4-204ENST00000477446 SPANXN1Q5VSR9 72 aa12.3□□□□□ -0.44
EPHB4-204ENST00000477446 PET117Q6UWS5 81 aa12.3□□□□□ -0.44
EPHB4-204ENST00000477446 C14orf144Q96I85 54 aa12.3□□□□□ -0.44
EPHB4-204ENST00000477446 MAP1LC3AQ9H492 121 aa12.3□□□□□ -0.44
EPHB4-204ENST00000477446 MSRB1Q9NZV6 116 aa12.3□□□□□ -0.44
EPHB4-204ENST00000477446 RNASE4P34096 147 aaKnown RBP12.29□□□□□ -0.44
EPHB4-204ENST00000477446 FXYD7P58549 80 aa12.29□□□□□ -0.44
EPHB4-204ENST00000477446 MIEN1Q9BRT3 115 aa12.29□□□□□ -0.44
EPHB4-204ENST00000477446 SYS1-DBNDD2H3BUS1 97 aa12.28□□□□□ -0.44
EPHB4-204ENST00000477446 S100A4P26447 101 aaKnown RBP12.28□□□□□ -0.44
EPHB4-204ENST00000477446 IFI27P40305 119 aaPredicted RBP12.28□□□□□ -0.44
EPHB4-204ENST00000477446 MRPL52Q86TS9 123 aaKnown RBP12.28□□□□□ -0.44
EPHB4-204ENST00000477446 LINC01546A6NGU7 62 aa12.27□□□□□ -0.44
EPHB4-204ENST00000477446 TSPOP30536 169 aa12.27□□□□□ -0.44
EPHB4-204ENST00000477446 NXT2Q9NPJ8 142 aaKnown RBP12.27□□□□□ -0.44
EPHB4-204ENST00000477446 PAM16Q9Y3D7 125 aa12.27□□□□□ -0.44
EPHB4-204ENST00000477446 PRSS47A8MTI9 375 aa12.26□□□□□ -0.45
EPHB4-204ENST00000477446 SPINK13Q1W4C9 94 aa12.26□□□□□ -0.45
EPHB4-204ENST00000477446 TDRG1Q3Y452 100 aa12.26□□□□□ -0.45
EPHB4-204ENST00000477446 ANXA2RQ3ZCQ2 193 aa12.26□□□□□ -0.45
EPHB4-204ENST00000477446 SPATA12Q7Z6I5 190 aa12.26□□□□□ -0.45
EPHB4-204ENST00000477446 TM2D3Q9BRN9 247 aa12.26□□□□□ -0.45
EPHB4-204ENST00000477446 SCRT2Q9NQ03 307 aa12.26□□□□□ -0.45
EPHB4-204ENST00000477446 XCL2Q9UBD3 114 aa12.26□□□□□ -0.45
EPHB4-204ENST00000477446 TRAV9-2A0A087WT02 112 aa12.26□□□□□ -0.45
EPHB4-204ENST00000477446 LOC389332A0A1B0GUA5 103 aa12.26□□□□□ -0.45
EPHB4-204ENST00000477446 NPYP01303 97 aa12.26□□□□□ -0.45
EPHB4-204ENST00000477446 DEFB135Q30KP9 77 aa12.26□□□□□ -0.45
EPHB4-204ENST00000477446 SPATA45Q537H7 98 aa12.26□□□□□ -0.45
EPHB4-204ENST00000477446 MRAP2Q96G30 205 aa12.26□□□□□ -0.45
EPHB4-204ENST00000477446 H3BVH4 76 aa12.25□□□□□ -0.45
EPHB4-204ENST00000477446 TNFRSF6BO95407 300 aa12.25□□□□□ -0.45
EPHB4-204ENST00000477446 FAM159AQ6UWV7 190 aa12.25□□□□□ -0.45
EPHB4-204ENST00000477446 CSNK1G2-AS1Q8NCQ2 148 aa12.25□□□□□ -0.45
EPHB4-204ENST00000477446 C1QTNF4Q9BXJ3 329 aa12.25□□□□□ -0.45
EPHB4-204ENST00000477446 PHLDA3Q9Y5J5 127 aa12.25□□□□□ -0.45
EPHB4-204ENST00000477446 NBEAL2Q6ZNJ1 2754 aa12.24□□□□□ -0.45
EPHB4-204ENST00000477446 J3KRW8 73 aa12.24□□□□□ -0.45
EPHB4-204ENST00000477446 HBDP02042 147 aa12.24□□□□□ -0.45
EPHB4-204ENST00000477446 EVI2AP22794 236 aa12.24□□□□□ -0.45
EPHB4-204ENST00000477446 CDKN1BP46527 198 aa12.24□□□□□ -0.45
EPHB4-204ENST00000477446 ZNF705AQ6ZN79 300 aaPredicted RBP12.24□□□□□ -0.45
EPHB4-204ENST00000477446 RETNQ9HD89 108 aa12.24□□□□□ -0.45
EPHB4-204ENST00000477446 TRAV12-2A0A075B6T6 113 aa12.23□□□□□ -0.45
EPHB4-204ENST00000477446 C7orf71A4D174 169 aa12.23□□□□□ -0.45
EPHB4-204ENST00000477446 KIR3DS1Q14943 382 aa12.23□□□□□ -0.45
EPHB4-204ENST00000477446 RNF183Q96D59 192 aa12.23□□□□□ -0.45
EPHB4-204ENST00000477446 SPATA25Q9BR10 227 aa12.23□□□□□ -0.45
EPHB4-204ENST00000477446 UQCR10Q9UDW1 63 aa12.23□□□□□ -0.45
EPHB4-204ENST00000477446 SMKR1H3BMG3 65 aa12.22□□□□□ -0.45
EPHB4-204ENST00000477446 Q6ZQT7 251 aa12.22□□□□□ -0.45
EPHB4-204ENST00000477446 Q8N8P6 123 aa12.22□□□□□ -0.45
EPHB4-204ENST00000477446 OVOL2Q9BRP0 275 aa12.22□□□□□ -0.45
EPHB4-204ENST00000477446 DPH3P1Q9H4G8 78 aa12.22□□□□□ -0.45
EPHB4-204ENST00000477446 SPRY2O43597 315 aa12.22□□□□□ -0.45
EPHB4-204ENST00000477446 NCR2O95944 276 aa12.22□□□□□ -0.45
EPHB4-204ENST00000477446 PPP1R17O96001 155 aa12.22□□□□□ -0.45
EPHB4-204ENST00000477446 NHLRC4P0CG21 123 aaPredicted RBP12.22□□□□□ -0.45
EPHB4-204ENST00000477446 ZMAT4Q9H898 229 aa12.22□□□□□ -0.45
EPHB4-204ENST00000477446 TP53TG1Q9Y2A0 90 aa12.22□□□□□ -0.45
EPHB4-204ENST00000477446 COL7A1Q02388 2944 aa12.21□□□□□ -0.45
EPHB4-204ENST00000477446 NXPH4O95158 308 aa12.21□□□□□ -0.46
EPHB4-204ENST00000477446 LINC01545Q5VT33 79 aa12.21□□□□□ -0.46
EPHB4-204ENST00000477446 LINC00173Q6ZV60 143 aa12.21□□□□□ -0.46
EPHB4-204ENST00000477446 HSBP1L1C9JCN9 74 aa12.2□□□□□ -0.46
EPHB4-204ENST00000477446 M0R143 59 aa12.2□□□□□ -0.46
EPHB4-204ENST00000477446 INSP01308 110 aa12.2□□□□□ -0.46
EPHB4-204ENST00000477446 IGLC3P0DOY3 106 aa12.2□□□□□ -0.46
EPHB4-204ENST00000477446 RNASE3P12724 160 aaKnown RBP12.2□□□□□ -0.46
EPHB4-204ENST00000477446 C1orf158Q8N1D5 194 aa12.2□□□□□ -0.46
EPHB4-204ENST00000477446 DNAH9Q9NYC9 4486 aa12.2□□□□□ -0.46
EPHB4-204ENST00000477446 A0A096LNJ9 63 aa12.19□□□□□ -0.46
EPHB4-204ENST00000477446 M0R381 172 aa12.19□□□□□ -0.46
EPHB4-204ENST00000477446 GNRH2O43555 120 aa12.19□□□□□ -0.46
EPHB4-204ENST00000477446 RBMY1A1P0DJD3 496 aaKnown RBP12.19□□□□□ -0.46
EPHB4-204ENST00000477446 RBMY1CP0DJD4 496 aa12.19□□□□□ -0.46
EPHB4-204ENST00000477446 FCER1GP30273 86 aa12.19□□□□□ -0.46
EPHB4-204ENST00000477446 RBMY1FQ15415 496 aaKnown RBP12.19□□□□□ -0.46
EPHB4-204ENST00000477446 AP1S3Q96PC3 154 aa12.19□□□□□ -0.46
EPHB4-204ENST00000477446 C2orf88Q9BSF0 95 aa12.19□□□□□ -0.46
EPHB4-204ENST00000477446 ST20Q9HBF5 79 aa12.19□□□□□ -0.46
EPHB4-204ENST00000477446 K7EMI3 77 aa12.18□□□□□ -0.46
EPHB4-204ENST00000477446 POM121L12Q8N7R1 296 aa12.18□□□□□ -0.46
EPHB4-204ENST00000477446 NRACQ8N912 160 aa12.18□□□□□ -0.46
EPHB4-204ENST00000477446 C20orf78Q9BR46 151 aa12.18□□□□□ -0.46
EPHB4-204ENST00000477446 TIMM8BQ9Y5J9 83 aaPredicted RBP12.18□□□□□ -0.46
EPHB4-204ENST00000477446 TENM3Q9P273 2699 aa12.18□□□□□ -0.46
EPHB4-204ENST00000477446 IGHV3OR16-12A0A075B7B8 117 aa12.18□□□□□ -0.46
EPHB4-204ENST00000477446 TRAV12-3A0A0B4J271 114 aa12.18□□□□□ -0.46
EPHB4-204ENST00000477446 LGALS9BQ3B8N2 356 aa12.18□□□□□ -0.46
EPHB4-204ENST00000477446 LGALS9CQ6DKI2 356 aa12.18□□□□□ -0.46
EPHB4-204ENST00000477446 OR11H2Q8NH07 326 aa12.18□□□□□ -0.46
EPHB4-204ENST00000477446 GOLT1BQ9Y3E0 138 aa12.18□□□□□ -0.46
EPHB4-204ENST00000477446 IGLV2-18A0A075B6J9 118 aa12.17□□□□□ -0.46
EPHB4-204ENST00000477446 ATOH7Q8N100 152 aa12.17□□□□□ -0.46
EPHB4-204ENST00000477446 X6R8D5 127 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms