RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 PSMB8P28062 276 aa14.39□□□□□ -0.11
VARS2-209ENST00000477288 GTF3C1Q12789 2109 aa14.38□□□□□ -0.11
VARS2-209ENST00000477288 B5MCH6 92 aa14.38□□□□□ -0.11
VARS2-209ENST00000477288 C2orf70A6NJV1 201 aa14.38□□□□□ -0.11
VARS2-209ENST00000477288 C16orf54Q6UWD8 224 aa14.38□□□□□ -0.11
VARS2-209ENST00000477288 MSRB1Q9NZV6 116 aa14.38□□□□□ -0.11
VARS2-209ENST00000477288 FRMPD3Q5JV73 1810 aa14.38□□□□□ -0.11
VARS2-209ENST00000477288 H0YGX0 51 aa14.38□□□□□ -0.11
VARS2-209ENST00000477288 IGLV3-1P01715 115 aa14.38□□□□□ -0.11
VARS2-209ENST00000477288 SHANK1Q9Y566 2161 aa14.38□□□□□ -0.11
VARS2-209ENST00000477288 IGFL2Q6UWQ7 119 aa14.38□□□□□ -0.11
VARS2-209ENST00000477288 IGLV11-55A0A075B6I3 123 aa14.37□□□□□ -0.11
VARS2-209ENST00000477288 H0Y9J4 135 aa14.37□□□□□ -0.11
VARS2-209ENST00000477288 MYCNOSP40205 109 aa14.37□□□□□ -0.11
VARS2-209ENST00000477288 K7EIM0 57 aa14.37□□□□□ -0.11
VARS2-209ENST00000477288 SPATA25Q9BR10 227 aa14.37□□□□□ -0.11
VARS2-209ENST00000477288 ACYP1P07311 99 aa14.37□□□□□ -0.11
VARS2-209ENST00000477288 ZFP36P26651 326 aaKnown RBP14.36□□□□□ -0.11
VARS2-209ENST00000477288 A4D1N5 150 aa14.36□□□□□ -0.11
VARS2-209ENST00000477288 RPL39P62891 51 aaKnown RBP14.36□□□□□ -0.11
VARS2-209ENST00000477288 Q8N1Y9 231 aa14.36□□□□□ -0.11
VARS2-209ENST00000477288 Q8N9W7 124 aa14.36□□□□□ -0.11
VARS2-209ENST00000477288 A0A0B4J2C4 111 aa14.36□□□□□ -0.11
VARS2-209ENST00000477288 WFDC11Q8NEX6 87 aa14.36□□□□□ -0.11
VARS2-209ENST00000477288 KLK12Q9UKR0 248 aa14.36□□□□□ -0.11
VARS2-209ENST00000477288 PROP1O75360 226 aa14.36□□□□□ -0.11
VARS2-209ENST00000477288 CTSGP08311 255 aa14.36□□□□□ -0.11
VARS2-209ENST00000477288 RNF138Q8WVD3 245 aa14.36□□□□□ -0.11
VARS2-209ENST00000477288 TMEM61Q8N0U2 210 aa14.35□□□□□ -0.11
VARS2-209ENST00000477288 C4orf3Q8WVX3 66 aa14.35□□□□□ -0.11
VARS2-209ENST00000477288 SEC61GP60059 68 aa14.34□□□□□ -0.11
VARS2-209ENST00000477288 ZGRF1Q86YA3 2104 aa14.34□□□□□ -0.11
VARS2-209ENST00000477288 TRBV7-3A0A075B6L6 115 aa14.33□□□□□ -0.12
VARS2-209ENST00000477288 SPAG11BQ08648 103 aa14.33□□□□□ -0.12
VARS2-209ENST00000477288 RNF183Q96D59 192 aa14.33□□□□□ -0.12
VARS2-209ENST00000477288 LINC00173Q6ZV60 143 aa14.32□□□□□ -0.12
VARS2-209ENST00000477288 LECT2O14960 151 aa14.32□□□□□ -0.12
VARS2-209ENST00000477288 MALRD1Q5VYJ5 2156 aa14.32□□□□□ -0.12
VARS2-209ENST00000477288 ACACBO00763 2458 aa14.32□□□□□ -0.12
VARS2-209ENST00000477288 DAZAP2Q15038 168 aaPredicted RBP14.32□□□□□ -0.12
VARS2-209ENST00000477288 HIGD2BQ4VC39 106 aa14.32□□□□□ -0.12
VARS2-209ENST00000477288 C10orf91Q5T1B1 145 aa14.32□□□□□ -0.12
VARS2-209ENST00000477288 DIRC1Q969H9 104 aa14.32□□□□□ -0.12
VARS2-209ENST00000477288 FGF23Q9GZV9 251 aaPredicted RBP14.32□□□□□ -0.12
VARS2-209ENST00000477288 IGF2-ASQ6U949 168 aa14.31□□□□□ -0.12
VARS2-209ENST00000477288 PRAC2D3DTV9 90 aa14.31□□□□□ -0.12
VARS2-209ENST00000477288 DEFB1P60022 68 aa14.3□□□□□ -0.12
VARS2-209ENST00000477288 SVIPQ8NHG7 77 aa14.3□□□□□ -0.12
VARS2-209ENST00000477288 NUP210Q8TEM1 1887 aaPredicted RBP14.3□□□□□ -0.12
VARS2-209ENST00000477288 LINC01545Q5VT33 79 aa14.3□□□□□ -0.12
VARS2-209ENST00000477288 IGKV2-24A0A0C4DH68 120 aa14.29□□□□□ -0.12
VARS2-209ENST00000477288 IGKV1-17P01599 117 aa14.29□□□□□ -0.12
VARS2-209ENST00000477288 CLEC2BQ92478 149 aa14.29□□□□□ -0.12
VARS2-209ENST00000477288 KMT2EQ8IZD2 1858 aa14.29□□□□□ -0.12
VARS2-209ENST00000477288 FAM236AA0A1B0GUQ0 79 aa14.28□□□□□ -0.12
VARS2-209ENST00000477288 FAM236BA0A1B0GV22 79 aa14.28□□□□□ -0.12
VARS2-209ENST00000477288 LRCOL1A6NCL2 159 aa14.28□□□□□ -0.12
VARS2-209ENST00000477288 B9D2Q9BPU9 175 aa14.28□□□□□ -0.12
VARS2-209ENST00000477288 IGKV4-1P06312 121 aa14.28□□□□□ -0.12
VARS2-209ENST00000477288 ANKRD39Q53RE8 183 aa14.28□□□□□ -0.12
VARS2-209ENST00000477288 PLXND1Q9Y4D7 1925 aa14.27□□□□□ -0.12
VARS2-209ENST00000477288 PTPRQQ9UMZ3 2332 aa14.27□□□□□ -0.12
VARS2-209ENST00000477288 H3BQ85 93 aa14.27□□□□□ -0.12
VARS2-209ENST00000477288 DNAJC9-AS1A6NH13 148 aa14.27□□□□□ -0.13
VARS2-209ENST00000477288 DEFB125Q8N687 156 aa14.27□□□□□ -0.13
VARS2-209ENST00000477288 NDUFC2O95298 119 aa14.27□□□□□ -0.13
VARS2-209ENST00000477288 LINC01620Q4KN68 170 aa14.27□□□□□ -0.13
VARS2-209ENST00000477288 Q8N7P7 452 aa14.26□□□□□ -0.13
VARS2-209ENST00000477288 LGALS9O00182 355 aa14.26□□□□□ -0.13
VARS2-209ENST00000477288 SPANXCQ9NY87 97 aa14.26□□□□□ -0.13
VARS2-209ENST00000477288 K7EMT4 169 aa14.26□□□□□ -0.13
VARS2-209ENST00000477288 ATOX1O00244 68 aa14.26□□□□□ -0.13
VARS2-209ENST00000477288 PATE2Q6UY27 113 aa14.26□□□□□ -0.13
VARS2-209ENST00000477288 MIR7-3HGQ8N6C7 128 aa14.26□□□□□ -0.13
VARS2-209ENST00000477288 Q8NFD4 153 aa14.25□□□□□ -0.13
VARS2-209ENST00000477288 GPHB5Q86YW7 130 aa14.25□□□□□ -0.13
VARS2-209ENST00000477288 GTSF1Q8WW33 167 aa14.25□□□□□ -0.13
VARS2-209ENST00000477288 WI2-2373I1.2A0A1W2PRP0 233 aa14.25□□□□□ -0.13
VARS2-209ENST00000477288 TTTY13Q9BZ97 58 aa14.25□□□□□ -0.13
VARS2-209ENST00000477288 CDPF1Q6NVV7 123 aa14.25□□□□□ -0.13
VARS2-209ENST00000477288 IL17DQ8TAD2 202 aa14.25□□□□□ -0.13
VARS2-209ENST00000477288 IL15RAQ13261 267 aa14.24□□□□□ -0.13
VARS2-209ENST00000477288 CXCL5P42830 114 aa14.24□□□□□ -0.13
VARS2-209ENST00000477288 NOTCH2Q04721 2471 aa14.24□□□□□ -0.13
VARS2-209ENST00000477288 C11orf45Q8TAV5 145 aa14.24□□□□□ -0.13
VARS2-209ENST00000477288 SPG11Q96JI7 2443 aa14.24□□□□□ -0.13
VARS2-209ENST00000477288 TRBV12-3P01733 135 aa14.24□□□□□ -0.13
VARS2-209ENST00000477288 TOMM6Q96B49 74 aa14.23□□□□□ -0.13
VARS2-209ENST00000477288 A0A096LNI7 61 aa14.23□□□□□ -0.13
VARS2-209ENST00000477288 JMJD7-PLA2G4BH0Y9G9 81 aa14.23□□□□□ -0.13
VARS2-209ENST00000477288 DYSFO75923 2080 aa14.23□□□□□ -0.13
VARS2-209ENST00000477288 IGKV2D-26A0A0A0MRZ7 120 aa14.22□□□□□ -0.13
VARS2-209ENST00000477288 TEX22C9J3V5 150 aa14.22□□□□□ -0.13
VARS2-209ENST00000477288 TECTAO75443 2155 aa14.22□□□□□ -0.13
VARS2-209ENST00000477288 INSL3P51460 131 aa14.22□□□□□ -0.13
VARS2-209ENST00000477288 COX7BP24311 80 aa14.21□□□□□ -0.13
VARS2-209ENST00000477288 FXYD2P54710 66 aa14.21□□□□□ -0.13
VARS2-209ENST00000477288 FAM110AQ9BQ89 295 aa14.21□□□□□ -0.13
VARS2-209ENST00000477288 HIGD2AQ9BW72 106 aa14.21□□□□□ -0.13
VARS2-209ENST00000477288 MDFICQ9P1T7 246 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms