RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 F6UZH7 168 aa4.85□□□□□ -1.63
BRCA1-214ENST00000477152 UPK1BO75841 260 aa4.85□□□□□ -1.63
BRCA1-214ENST00000477152 GCGP01275 180 aa4.85□□□□□ -1.63
BRCA1-214ENST00000477152 IGHV3-30P01768 117 aa4.85□□□□□ -1.63
BRCA1-214ENST00000477152 IGHV3-33P01772 117 aa4.85□□□□□ -1.63
BRCA1-214ENST00000477152 IGHV3-30-3P0DP02 117 aa4.85□□□□□ -1.63
BRCA1-214ENST00000477152 IGHV3-30-5P0DP03 117 aa4.85□□□□□ -1.63
BRCA1-214ENST00000477152 CFAP126Q5VTH2 177 aa4.85□□□□□ -1.63
BRCA1-214ENST00000477152 KRTAP4-9Q9BYQ8 210 aa4.85□□□□□ -1.63
BRCA1-214ENST00000477152 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
BRCA1-214ENST00000477152 SMIM3Q9BZL3 60 aa4.85□□□□□ -1.63
BRCA1-214ENST00000477152 LRP1BQ9NZR2 4599 aa4.84□□□□□ -1.63
BRCA1-214ENST00000477152 CXorf1O96002 111 aa4.84□□□□□ -1.63
BRCA1-214ENST00000477152 FUSP35637 526 aaKnown RBP eCLIP4.84□□□□□ -1.63
BRCA1-214ENST00000477152 AMTP48728 403 aa4.84□□□□□ -1.63
BRCA1-214ENST00000477152 SERF2P84101 59 aa4.84□□□□□ -1.63
BRCA1-214ENST00000477152 FLI1Q01543 452 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-214ENST00000477152 UBE2V1Q13404 147 aa4.84□□□□□ -1.63
BRCA1-214ENST00000477152 LGALSLQ3ZCW2 172 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-214ENST00000477152 C14orf177Q52M58 125 aa4.84□□□□□ -1.63
BRCA1-214ENST00000477152 CYB561D1Q8N8Q1 229 aa4.84□□□□□ -1.63
BRCA1-214ENST00000477152 Q8N976 141 aa4.84□□□□□ -1.63
BRCA1-214ENST00000477152 DEFB104AQ8WTQ1 72 aa4.84□□□□□ -1.63
BRCA1-214ENST00000477152 NKX6-2Q9C056 277 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-214ENST00000477152 PSG8Q9UQ74 426 aa4.84□□□□□ -1.63
BRCA1-214ENST00000477152 LOC100131303A0A0U1RQF7 123 aa4.84□□□□□ -1.64
BRCA1-214ENST00000477152 TCRAP04437 139 aa4.84□□□□□ -1.64
BRCA1-214ENST00000477152 ASIPP42127 132 aa4.84□□□□□ -1.64
BRCA1-214ENST00000477152 PKIAP61925 76 aa4.84□□□□□ -1.64
BRCA1-214ENST00000477152 TMEM75Q8N9X5 138 aa4.84□□□□□ -1.64
BRCA1-214ENST00000477152 C9orf85Q96MD7 179 aa4.84□□□□□ -1.64
BRCA1-214ENST00000477152 PSMG3Q9BT73 122 aaPredicted RBP4.84□□□□□ -1.64
BRCA1-214ENST00000477152 ACTR3CQ9C0K3 210 aaPredicted RBP4.84□□□□□ -1.64
BRCA1-214ENST00000477152 FABP5P3A8MUU1 101 aa4.83□□□□□ -1.64
BRCA1-214ENST00000477152 STAG3L2P0CL84 134 aa4.83□□□□□ -1.64
BRCA1-214ENST00000477152 STAG3L3P0CL85 134 aa4.83□□□□□ -1.64
BRCA1-214ENST00000477152 ARL14EPLP0DKL9 152 aa4.83□□□□□ -1.64
BRCA1-214ENST00000477152 Q0VG73 95 aa4.83□□□□□ -1.64
BRCA1-214ENST00000477152 PRNTQ86SH4 94 aa4.83□□□□□ -1.64
BRCA1-214ENST00000477152 OR2G3Q8NGZ4 309 aa4.83□□□□□ -1.64
BRCA1-214ENST00000477152 MARVELD1Q9BSK0 173 aa4.83□□□□□ -1.64
BRCA1-214ENST00000477152 CHCHD7Q9BUK0 85 aa4.83□□□□□ -1.64
BRCA1-214ENST00000477152 DNAH5Q8TE73 4624 aa4.83□□□□□ -1.64
BRCA1-214ENST00000477152 IGHV3-73A0A0B4J1V6 119 aa4.82□□□□□ -1.64
BRCA1-214ENST00000477152 RBFOX3A6NFN3 312 aa4.82□□□□□ -1.64
BRCA1-214ENST00000477152 IFNA7P01567 189 aa4.82□□□□□ -1.64
BRCA1-214ENST00000477152 GCHFRP30047 84 aa4.82□□□□□ -1.64
BRCA1-214ENST00000477152 H2BFSP57053 126 aa4.82□□□□□ -1.64
BRCA1-214ENST00000477152 RAB2AP61019 212 aa4.82□□□□□ -1.64
BRCA1-214ENST00000477152 GNG5P63218 68 aa4.82□□□□□ -1.64
BRCA1-214ENST00000477152 ZNF506Q5JVG8 444 aa4.82□□□□□ -1.64
BRCA1-214ENST00000477152 EPDR1Q9UM22 224 aa4.82□□□□□ -1.64
BRCA1-214ENST00000477152 DMBT1Q9UGM3 2413 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-214ENST00000477152 A0A087WX48 190 aa4.82□□□□□ -1.64
BRCA1-214ENST00000477152 BORCS7-ASMTA0A0B4J1R7 106 aa4.82□□□□□ -1.64
BRCA1-214ENST00000477152 A0A1W2PRE2 83 aa4.82□□□□□ -1.64
BRCA1-214ENST00000477152 GAGE1Q13065 139 aa4.82□□□□□ -1.64
BRCA1-214ENST00000477152 GAGE4Q13068 117 aa4.82□□□□□ -1.64
BRCA1-214ENST00000477152 GAGE5Q13069 117 aa4.82□□□□□ -1.64
BRCA1-214ENST00000477152 OR11H4Q8NGC9 324 aa4.82□□□□□ -1.64
BRCA1-214ENST00000477152 PARLQ9H300 379 aa4.82□□□□□ -1.64
BRCA1-214ENST00000477152 TNFSF18Q9UNG2 199 aa4.82□□□□□ -1.64
BRCA1-214ENST00000477152 HMGB3O15347 200 aaKnown RBP4.81□□□□□ -1.64
BRCA1-214ENST00000477152 INO80EQ8NBZ0 244 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-214ENST00000477152 SUN5Q8TC36 379 aa4.81□□□□□ -1.64
BRCA1-214ENST00000477152 HIST1H2BAQ96A08 127 aa4.81□□□□□ -1.64
BRCA1-214ENST00000477152 TVP23CQ96ET8 276 aa4.81□□□□□ -1.64
BRCA1-214ENST00000477152 IL36BQ9NZH7 164 aa4.81□□□□□ -1.64
BRCA1-214ENST00000477152 APOBP04114 4563 aaKnown RBP4.81□□□□□ -1.64
BRCA1-214ENST00000477152 IGKV2D-24A0A075B6R9 120 aa4.8□□□□□ -1.64
BRCA1-214ENST00000477152 KRTAP29-1A8MX34 341 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-214ENST00000477152 B4DEV8 164 aa4.8□□□□□ -1.64
BRCA1-214ENST00000477152 TPT1P13693 172 aaKnown RBP4.8□□□□□ -1.64
BRCA1-214ENST00000477152 RPL36AP83881 106 aaKnown RBP4.8□□□□□ -1.64
BRCA1-214ENST00000477152 HSD17B11Q8NBQ5 300 aa4.8□□□□□ -1.64
BRCA1-214ENST00000477152 SGK494Q96LW2 274 aa4.8□□□□□ -1.64
BRCA1-214ENST00000477152 ZFP30Q9Y2G7 519 aa4.8□□□□□ -1.64
BRCA1-214ENST00000477152 PHLDA3Q9Y5J5 127 aa4.8□□□□□ -1.64
BRCA1-214ENST00000477152 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-214ENST00000477152 TRBV10-1A0A0K0K1A3 114 aa4.8□□□□□ -1.64
BRCA1-214ENST00000477152 CRPP02741 224 aa4.8□□□□□ -1.64
BRCA1-214ENST00000477152 RNASE3P12724 160 aaKnown RBP4.8□□□□□ -1.64
BRCA1-214ENST00000477152 SEC61BP60468 96 aaKnown RBP4.8□□□□□ -1.64
BRCA1-214ENST00000477152 UBE2G1P62253 170 aa4.8□□□□□ -1.64
BRCA1-214ENST00000477152 TMEM97Q5BJF2 176 aa4.8□□□□□ -1.64
BRCA1-214ENST00000477152 OR2T35Q8NGX2 323 aa4.8□□□□□ -1.64
BRCA1-214ENST00000477152 TCEAL7Q9BRU2 100 aa4.8□□□□□ -1.64
BRCA1-214ENST00000477152 OXTP01178 125 aa4.79□□□□□ -1.64
BRCA1-214ENST00000477152 ATP6V0CP27449 155 aa4.79□□□□□ -1.64
BRCA1-214ENST00000477152 ZNF80P51504 273 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-214ENST00000477152 DNLZQ5SXM8 178 aa4.79□□□□□ -1.64
BRCA1-214ENST00000477152 DPPA3Q6W0C5 159 aa4.79□□□□□ -1.64
BRCA1-214ENST00000477152 Q6ZSA8 131 aa4.79□□□□□ -1.64
BRCA1-214ENST00000477152 ZFP82Q8N141 532 aa4.79□□□□□ -1.64
BRCA1-214ENST00000477152 STOML3Q8TAV4 291 aa4.79□□□□□ -1.64
BRCA1-214ENST00000477152 FMC1Q96HJ9 113 aa4.79□□□□□ -1.64
BRCA1-214ENST00000477152 AQP10Q96PS8 301 aa4.79□□□□□ -1.64
BRCA1-214ENST00000477152 MED28Q9H204 178 aa4.79□□□□□ -1.64
BRCA1-214ENST00000477152 WFDC1Q9HC57 220 aa4.79□□□□□ -1.64
BRCA1-214ENST00000477152 CTXND1A0A1B0GTU2 59 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms