RNA–Protein interactions for RNA: ENST00000477141.1

RPL39P34-201, Transcript of ribosomal protein L39 pseudogene 34, humanhuman

BASIC

Gene RPL39P34, Length 156 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P34-201ENST00000477141 BAGE3Q86Y29 109 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 C20orf197Q8N268 126 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 DEFB123Q8N688 67 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 MORN4Q8NDC4 146 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 OR5H6Q8NGV6 325 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 BTF3L4Q96K17 158 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 PRELID3AQ96N28 172 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 WFDC6Q9BQY6 131 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 RTL8AQ9BWD3 113 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 LRTM1Q9HBL6 345 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 TAF9BQ9HBM6 251 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 TAS2R8Q9NYW2 309 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 ERG28Q9UKR5 140 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 NDUFAF1Q9Y375 327 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 PRELID3BQ9Y3B1 194 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 DNAJC13O75165 2243 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 MYH1P12882 1939 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 ARFGEF1Q9Y6D6 1849 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 PTPN23Q9H3S7 1636 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 MUC17Q685J3 4493 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 CCDC144AA2RUR9 1427 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 FAM135BQ49AJ0 1406 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 NSD3Q9BZ95 1437 aa-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 URB1O60287 2271 aaKnown RBP-0.64□□□□□ -2.51
RPL39P34-201ENST00000477141 NIPBLQ6KC79 2804 aaeCLIP-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 ADAMTS12P58397 1594 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 SMIM23A6NLE4 172 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 RIIAD1A6NNX1 92 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 G3V2T6 193 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 H0YGG7 62 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 J3KT08 172 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 IFNGP01579 166 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 FABP2P12104 132 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 SLC25A4P12235 298 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 CKS2P33552 79 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 SRP9P49458 86 aaKnown RBP-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 NCALDP61601 193 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 HSPE1P61604 102 aaKnown RBP-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 NPC2P61916 151 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 MT1HP80294 61 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 PLGLB1Q02325 96 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 SPCS2Q15005 226 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 RTL8BQ17RB0 113 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 LIN52Q52LA3 116 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 C9orf62Q8N4C0 152 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 NUP35Q8NFH5 326 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 OR51A4Q8NGJ6 313 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 OTOSQ8NHW6 89 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 IFI27L1Q96BM0 104 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 SIGMAR1Q99720 223 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 NMNAT1Q9HAN9 279 aaPredicted RBP-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 FKBP11Q9NYL4 201 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 NKIRAS1Q9NYS0 192 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 IL20Q9NYY1 176 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 NUBP2Q9Y5Y2 271 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 KIAA0556O60303 1618 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 PKD1P98161 4303 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 SPG11Q96JI7 2443 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 SLIT1O75093 1534 aa-0.65□□□□□ -2.51
RPL39P34-201ENST00000477141 LAMA1P25391 3075 aa-0.66□□□□□ -2.51
RPL39P34-201ENST00000477141 IBTKQ9P2D0 1353 aaPredicted RBP-0.66□□□□□ -2.51
RPL39P34-201ENST00000477141 TRAV12-3A0A0B4J271 114 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 TRBV27A0A0K0K1C4 114 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 FAM92AA1XBS5 289 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 FAM25EA8MYX2 175 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 TMEM114B3SHH9 223 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 CCDC179H3BU77 68 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 SYS1-DBNDD2H3BUS1 97 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 H7C1C5 153 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 TFF1P04155 84 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 COX8AP10176 69 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 SLC25A6P12236 298 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 LCN6P62502 163 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 BLCAPP62952 87 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 HSD17B12Q53GQ0 312 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 SLC25A26Q70HW3 274 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 CNPY4Q8N129 248 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 DYNLRB2Q8TF09 96 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 SMIM4Q8WVI0 70 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 BORCS8Q96FH0 119 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 LAMTOR3Q9UHA4 124 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 UFC1Q9Y3C8 167 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 FAM32AQ9Y421 112 aaKnown RBP-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 TROQ12816 1431 aaPredicted RBP-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 MYOM3Q5VTT5 1437 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 TANC2Q9HCD6 1990 aa-0.66□□□□□ -2.52
RPL39P34-201ENST00000477141 PLECQ15149 4684 aaKnown RBP-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 DOCK1Q14185 1865 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 FER1L6Q2WGJ9 1857 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 NUP210Q8TEM1 1887 aaPredicted RBP-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 USP9XQ93008 2570 aaPredicted RBP-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 TRDV1A0A1B0GX56 115 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 CETN3O15182 167 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 PIRTP0C851 137 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 CYBAP13498 195 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 CRYGSP22914 178 aa-0.67□□□□□ -2.52
RPL39P34-201ENST00000477141 SDC2P34741 201 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms