RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 FHL2Q14192 279 aa9.26□□□□□ -0.93
HLA-DPA1-246ENST00000476642 DMRTA1Q5VZB9 504 aa9.26□□□□□ -0.93
HLA-DPA1-246ENST00000476642 ZNF575Q86XF7 245 aa9.26□□□□□ -0.93
HLA-DPA1-246ENST00000476642 ZNF479Q96JC4 524 aa9.26□□□□□ -0.93
HLA-DPA1-246ENST00000476642 NXPH4O95158 308 aa9.25□□□□□ -0.93
HLA-DPA1-246ENST00000476642 NUDT3O95989 172 aa9.25□□□□□ -0.93
HLA-DPA1-246ENST00000476642 SFTA3P0C7M3 94 aa9.25□□□□□ -0.93
HLA-DPA1-246ENST00000476642 IGLC6P0CF74 106 aa9.25□□□□□ -0.93
HLA-DPA1-246ENST00000476642 CRYBA4P53673 196 aa9.25□□□□□ -0.93
HLA-DPA1-246ENST00000476642 RPL23P62829 140 aaKnown RBP9.25□□□□□ -0.93
HLA-DPA1-246ENST00000476642 PNRC1Q12796 327 aaPredicted RBP9.25□□□□□ -0.93
HLA-DPA1-246ENST00000476642 ADIRFQ15847 76 aa9.25□□□□□ -0.93
HLA-DPA1-246ENST00000476642 WDR73Q6P4I2 378 aa9.25□□□□□ -0.93
HLA-DPA1-246ENST00000476642 POM121L12Q8N7R1 296 aa9.25□□□□□ -0.93
HLA-DPA1-246ENST00000476642 SFRP2Q96HF1 295 aa9.25□□□□□ -0.93
HLA-DPA1-246ENST00000476642 TPPP3Q9BW30 176 aa9.25□□□□□ -0.93
HLA-DPA1-246ENST00000476642 A0A0J9YY99 117 aa9.24□□□□□ -0.93
HLA-DPA1-246ENST00000476642 TRBV6-4A0A1B0GX49 114 aa9.24□□□□□ -0.93
HLA-DPA1-246ENST00000476642 FAM231BA6NCW3 169 aa9.24□□□□□ -0.93
HLA-DPA1-246ENST00000476642 SMIM17P0DL12 118 aa9.24□□□□□ -0.93
HLA-DPA1-246ENST00000476642 RHOHQ15669 191 aa9.24□□□□□ -0.93
HLA-DPA1-246ENST00000476642 MRPL23Q16540 153 aaKnown RBP9.24□□□□□ -0.93
HLA-DPA1-246ENST00000476642 RNF212Q495C1 297 aa9.24□□□□□ -0.93
HLA-DPA1-246ENST00000476642 ISOC2Q96AB3 205 aa9.24□□□□□ -0.93
HLA-DPA1-246ENST00000476642 BORCS7Q96B45 105 aa9.24□□□□□ -0.93
HLA-DPA1-246ENST00000476642 AP1S3Q96PC3 154 aa9.24□□□□□ -0.93
HLA-DPA1-246ENST00000476642 PRADC1Q9BSG0 188 aa9.24□□□□□ -0.93
HLA-DPA1-246ENST00000476642 SMCO4Q9NRQ5 59 aa9.24□□□□□ -0.93
HLA-DPA1-246ENST00000476642 ICOSQ9Y6W8 199 aa9.24□□□□□ -0.93
HLA-DPA1-246ENST00000476642 C1orf196B1AJZ1 125 aa9.23□□□□□ -0.93
HLA-DPA1-246ENST00000476642 TRGC1P0CF51 173 aa9.23□□□□□ -0.93
HLA-DPA1-246ENST00000476642 GZMBP10144 247 aa9.23□□□□□ -0.93
HLA-DPA1-246ENST00000476642 GATA1P15976 413 aaPredicted RBP9.23□□□□□ -0.93
HLA-DPA1-246ENST00000476642 CCL18P55774 89 aa9.23□□□□□ -0.93
HLA-DPA1-246ENST00000476642 SH2D6Q7Z4S9 175 aa9.23□□□□□ -0.93
HLA-DPA1-246ENST00000476642 UBE2DNLQ8IWF7 75 aa9.23□□□□□ -0.93
HLA-DPA1-246ENST00000476642 OR10G8Q8NGN5 311 aa9.23□□□□□ -0.93
HLA-DPA1-246ENST00000476642 OR10AG1Q8NH19 301 aa9.23□□□□□ -0.93
HLA-DPA1-246ENST00000476642 GFRA4Q9GZZ7 299 aa9.23□□□□□ -0.93
HLA-DPA1-246ENST00000476642 NACAE9PAV3 2078 aa9.23□□□□□ -0.93
HLA-DPA1-246ENST00000476642 CTRLP40313 264 aa9.22□□□□□ -0.93
HLA-DPA1-246ENST00000476642 FAM3BP58499 235 aaPredicted RBP9.22□□□□□ -0.93
HLA-DPA1-246ENST00000476642 LYZL1Q6UWQ5 148 aa9.22□□□□□ -0.93
HLA-DPA1-246ENST00000476642 TSKUQ8WUA8 353 aa9.22□□□□□ -0.93
HLA-DPA1-246ENST00000476642 VSIG2Q96IQ7 327 aa9.22□□□□□ -0.93
HLA-DPA1-246ENST00000476642 PPP1R2P9O14990 202 aa9.21□□□□□ -0.94
HLA-DPA1-246ENST00000476642 S100A6P06703 90 aa9.21□□□□□ -0.94
HLA-DPA1-246ENST00000476642 SRIP30626 198 aa9.21□□□□□ -0.94
HLA-DPA1-246ENST00000476642 FOXA3P55318 350 aaPredicted RBP9.21□□□□□ -0.94
HLA-DPA1-246ENST00000476642 FAM74A4Q5TZK3 123 aa9.21□□□□□ -0.94
HLA-DPA1-246ENST00000476642 SMIM15Q7Z3B0 74 aa9.21□□□□□ -0.94
HLA-DPA1-246ENST00000476642 CNFNQ9BYD5 112 aa9.21□□□□□ -0.94
HLA-DPA1-246ENST00000476642 ALMS1Q8TCU4 4167 aa9.2□□□□□ -0.94
HLA-DPA1-246ENST00000476642 IGHV3-73A0A0B4J1V6 119 aa9.2□□□□□ -0.94
HLA-DPA1-246ENST00000476642 CRYGDP07320 174 aa9.2□□□□□ -0.94
HLA-DPA1-246ENST00000476642 GYPEP15421 78 aa9.2□□□□□ -0.94
HLA-DPA1-246ENST00000476642 ADCYAP1P18509 176 aa9.2□□□□□ -0.94
HLA-DPA1-246ENST00000476642 RAB4BP61018 213 aa9.2□□□□□ -0.94
HLA-DPA1-246ENST00000476642 NEGR1Q7Z3B1 354 aa9.2□□□□□ -0.94
HLA-DPA1-246ENST00000476642 SLC25A29Q8N8R3 303 aa9.2□□□□□ -0.94
HLA-DPA1-246ENST00000476642 A0A087WWL8 130 aa9.19□□□□□ -0.94
HLA-DPA1-246ENST00000476642 A0A096LPF7 62 aa9.19□□□□□ -0.94
HLA-DPA1-246ENST00000476642 K7EQD1 137 aa9.19□□□□□ -0.94
HLA-DPA1-246ENST00000476642 MT-ND4LP03901 98 aa9.19□□□□□ -0.94
HLA-DPA1-246ENST00000476642 NTF3P20783 257 aa9.19□□□□□ -0.94
HLA-DPA1-246ENST00000476642 S100PP25815 95 aa9.19□□□□□ -0.94
HLA-DPA1-246ENST00000476642 SSTP61278 116 aa9.19□□□□□ -0.94
HLA-DPA1-246ENST00000476642 UFSP1Q6NVU6 142 aa9.19□□□□□ -0.94
HLA-DPA1-246ENST00000476642 CBLN2Q8IUK8 224 aa9.19□□□□□ -0.94
HLA-DPA1-246ENST00000476642 SAMD10Q9BYL1 202 aa9.19□□□□□ -0.94
HLA-DPA1-246ENST00000476642 JPT2Q9H910 190 aa9.19□□□□□ -0.94
HLA-DPA1-246ENST00000476642 NAT8BQ9UHF3 227 aa9.19□□□□□ -0.94
HLA-DPA1-246ENST00000476642 V9GYV3 84 aa9.19□□□□□ -0.94
HLA-DPA1-246ENST00000476642 HYDINQ4G0P3 5121 aa9.19□□□□□ -0.94
HLA-DPA1-246ENST00000476642 MUC21A0A0G2JKD1 596 aa9.18□□□□□ -0.94
HLA-DPA1-246ENST00000476642 TRBV10-1A0A0K0K1A3 114 aa9.18□□□□□ -0.94
HLA-DPA1-246ENST00000476642 MUC21A0A140T8X8 626 aa9.18□□□□□ -0.94
HLA-DPA1-246ENST00000476642 HIGD1CA8MV81 97 aa9.18□□□□□ -0.94
HLA-DPA1-246ENST00000476642 H7C1H1 209 aa9.18□□□□□ -0.94
HLA-DPA1-246ENST00000476642 TWIST1Q15672 202 aa9.18□□□□□ -0.94
HLA-DPA1-246ENST00000476642 ZNF56Q15929 161 aa9.18□□□□□ -0.94
HLA-DPA1-246ENST00000476642 GTSF1Q8WW33 167 aa9.18□□□□□ -0.94
HLA-DPA1-246ENST00000476642 ANAPC16Q96DE5 110 aa9.18□□□□□ -0.94
HLA-DPA1-246ENST00000476642 A0A1B0GUT8 65 aa9.17□□□□□ -0.94
HLA-DPA1-246ENST00000476642 F5H697 171 aa9.17□□□□□ -0.94
HLA-DPA1-246ENST00000476642 C14orf178Q8N769 122 aaPredicted RBP9.17□□□□□ -0.94
HLA-DPA1-246ENST00000476642 LINC00469Q8N7U9 141 aa9.17□□□□□ -0.94
HLA-DPA1-246ENST00000476642 PGLYRP4Q96LB8 373 aa9.17□□□□□ -0.94
HLA-DPA1-246ENST00000476642 DPH3P1Q9H4G8 78 aa9.17□□□□□ -0.94
HLA-DPA1-246ENST00000476642 PLECQ15149 4684 aaKnown RBP9.17□□□□□ -0.94
HLA-DPA1-246ENST00000476642 C5orf52A6NGY3 159 aa9.16□□□□□ -0.94
HLA-DPA1-246ENST00000476642 COLCA2A8K830 154 aa9.16□□□□□ -0.94
HLA-DPA1-246ENST00000476642 RIGQ13278 110 aa9.16□□□□□ -0.94
HLA-DPA1-246ENST00000476642 RHEBQ15382 184 aa9.16□□□□□ -0.94
HLA-DPA1-246ENST00000476642 A0A1B0GW15 77 aa9.15□□□□□ -0.94
HLA-DPA1-246ENST00000476642 SMIM27A0A1W2PRY6 76 aa9.15□□□□□ -0.94
HLA-DPA1-246ENST00000476642 RPL36AP83881 106 aaKnown RBP9.15□□□□□ -0.94
HLA-DPA1-246ENST00000476642 RPL36ALQ969Q0 106 aaKnown RBP9.15□□□□□ -0.94
HLA-DPA1-246ENST00000476642 MSRB1Q9NZV6 116 aa9.15□□□□□ -0.94
HLA-DPA1-246ENST00000476642 KIF25-AS1Q9Y6Z4 181 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms