RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 MEF2BQ02080 365 aaPredicted RBP6.97□□□□□ -1.29
CCM2-208ENST00000476594 LINC01556Q5JQF7 62 aa6.97□□□□□ -1.29
CCM2-208ENST00000476594 PRR27Q6MZM9 219 aa6.97□□□□□ -1.29
CCM2-208ENST00000476594 C11orf52Q96A22 123 aa6.97□□□□□ -1.29
CCM2-208ENST00000476594 SFRP2Q96HF1 295 aa6.97□□□□□ -1.29
CCM2-208ENST00000476594 TRBV10-1A0A0K0K1A3 114 aa6.96□□□□□ -1.3
CCM2-208ENST00000476594 PSCAO43653 123 aa6.96□□□□□ -1.3
CCM2-208ENST00000476594 SMIM17P0DL12 118 aa6.96□□□□□ -1.3
CCM2-208ENST00000476594 GNG4P50150 75 aa6.96□□□□□ -1.3
CCM2-208ENST00000476594 RPS20P60866 119 aaKnown RBP6.96□□□□□ -1.3
CCM2-208ENST00000476594 TOR2AQ5JU69 321 aa6.96□□□□□ -1.3
CCM2-208ENST00000476594 SPANXN1Q5VSR9 72 aa6.96□□□□□ -1.3
CCM2-208ENST00000476594 MLST8Q9BVC4 326 aa6.96□□□□□ -1.3
CCM2-208ENST00000476594 SCRT2Q9NQ03 307 aa6.96□□□□□ -1.3
CCM2-208ENST00000476594 DNAH11Q96DT5 4516 aa6.96□□□□□ -1.3
CCM2-208ENST00000476594 hCG_2014768A0A024R1R8 64 aa6.95□□□□□ -1.3
CCM2-208ENST00000476594 GAGE12JA6NER3 117 aa6.95□□□□□ -1.3
CCM2-208ENST00000476594 BCL2P10415 239 aa6.95□□□□□ -1.3
CCM2-208ENST00000476594 BLOC1S1P78537 153 aa6.95□□□□□ -1.3
CCM2-208ENST00000476594 CCL20P78556 96 aa6.95□□□□□ -1.3
CCM2-208ENST00000476594 RPL36AP83881 106 aaKnown RBP6.95□□□□□ -1.3
CCM2-208ENST00000476594 GAGE1Q13065 139 aa6.95□□□□□ -1.3
CCM2-208ENST00000476594 GAGE4Q13068 117 aa6.95□□□□□ -1.3
CCM2-208ENST00000476594 GAGE5Q13069 117 aa6.95□□□□□ -1.3
CCM2-208ENST00000476594 GAGE13Q4V321 117 aa6.95□□□□□ -1.3
CCM2-208ENST00000476594 KCNIP4Q6PIL6 250 aa6.95□□□□□ -1.3
CCM2-208ENST00000476594 SPATA12Q7Z6I5 190 aa6.95□□□□□ -1.3
CCM2-208ENST00000476594 ZNF575Q86XF7 245 aa6.95□□□□□ -1.3
CCM2-208ENST00000476594 RPL36ALQ969Q0 106 aaKnown RBP6.95□□□□□ -1.3
CCM2-208ENST00000476594 MED9Q9NWA0 146 aa6.95□□□□□ -1.3
CCM2-208ENST00000476594 VAX2Q9UIW0 290 aa6.95□□□□□ -1.3
CCM2-208ENST00000476594 URGCP-MRPS24S4R325 110 aa6.95□□□□□ -1.3
CCM2-208ENST00000476594 OR5AL1P0C617 328 aa6.94□□□□□ -1.3
CCM2-208ENST00000476594 LAGE3Q14657 143 aa6.94□□□□□ -1.3
CCM2-208ENST00000476594 ZNF56Q15929 161 aa6.94□□□□□ -1.3
CCM2-208ENST00000476594 CENPWQ5EE01 88 aa6.94□□□□□ -1.3
CCM2-208ENST00000476594 CDPF1Q6NVV7 123 aa6.94□□□□□ -1.3
CCM2-208ENST00000476594 AP1S3Q96PC3 154 aa6.94□□□□□ -1.3
CCM2-208ENST00000476594 PGPEP1Q9NXJ5 209 aa6.94□□□□□ -1.3
CCM2-208ENST00000476594 PKD1P98161 4303 aa6.94□□□□□ -1.3
CCM2-208ENST00000476594 HERC2O95714 4834 aa6.94□□□□□ -1.3
CCM2-208ENST00000476594 A0A087WWL8 130 aa6.93□□□□□ -1.3
CCM2-208ENST00000476594 SNAI2O43623 268 aa6.93□□□□□ -1.3
CCM2-208ENST00000476594 P01737 135 aa6.93□□□□□ -1.3
CCM2-208ENST00000476594 RAB4BP61018 213 aa6.93□□□□□ -1.3
CCM2-208ENST00000476594 UFSP1Q6NVU6 142 aa6.93□□□□□ -1.3
CCM2-208ENST00000476594 Q6ZRN7 208 aaPredicted RBP6.93□□□□□ -1.3
CCM2-208ENST00000476594 TM2D2Q9BX73 214 aa6.93□□□□□ -1.3
CCM2-208ENST00000476594 JPT2Q9H910 190 aa6.93□□□□□ -1.3
CCM2-208ENST00000476594 IBA57-AS1B1ANH7 110 aa6.92□□□□□ -1.3
CCM2-208ENST00000476594 CDK2AP2O75956 126 aa6.92□□□□□ -1.3
CCM2-208ENST00000476594 PKIAP61925 76 aa6.92□□□□□ -1.3
CCM2-208ENST00000476594 RPL19P84098 196 aaKnown RBP6.92□□□□□ -1.3
CCM2-208ENST00000476594 ELOBQ15370 118 aa6.92□□□□□ -1.3
CCM2-208ENST00000476594 TMEM97Q5BJF2 176 aa6.92□□□□□ -1.3
CCM2-208ENST00000476594 C9orf62Q8N4C0 152 aa6.92□□□□□ -1.3
CCM2-208ENST00000476594 C14orf178Q8N769 122 aaPredicted RBP6.92□□□□□ -1.3
CCM2-208ENST00000476594 OR2D3Q8NGH3 330 aa6.92□□□□□ -1.3
CCM2-208ENST00000476594 OR10AG1Q8NH19 301 aa6.92□□□□□ -1.3
CCM2-208ENST00000476594 CHCHD7Q9BUK0 85 aa6.92□□□□□ -1.3
CCM2-208ENST00000476594 DERL1Q9BUN8 251 aa6.92□□□□□ -1.3
CCM2-208ENST00000476594 SSBP4Q9BWG4 385 aaPredicted RBP6.92□□□□□ -1.3
CCM2-208ENST00000476594 SAMD10Q9BYL1 202 aa6.92□□□□□ -1.3
CCM2-208ENST00000476594 COX11Q9Y6N1 276 aa6.92□□□□□ -1.3
CCM2-208ENST00000476594 DYNC1H1Q14204 4646 aaKnown RBP6.92□□□□□ -1.3
CCM2-208ENST00000476594 TRBV7-3A0A075B6L6 115 aa6.91□□□□□ -1.3
CCM2-208ENST00000476594 TRAV8-3A0A0A6YYJ7 113 aa6.91□□□□□ -1.3
CCM2-208ENST00000476594 F2Z2F3 143 aa6.91□□□□□ -1.3
CCM2-208ENST00000476594 F5H697 171 aa6.91□□□□□ -1.3
CCM2-208ENST00000476594 H7C1H1 209 aa6.91□□□□□ -1.3
CCM2-208ENST00000476594 IGHV3-30P01768 117 aa6.91□□□□□ -1.3
CCM2-208ENST00000476594 IGHV3-33P01772 117 aa6.91□□□□□ -1.3
CCM2-208ENST00000476594 LINC00694P0DN24 101 aa6.91□□□□□ -1.3
CCM2-208ENST00000476594 IGHV3-30-3P0DP02 117 aa6.91□□□□□ -1.3
CCM2-208ENST00000476594 IGHV3-30-5P0DP03 117 aa6.91□□□□□ -1.3
CCM2-208ENST00000476594 CACNG7P62955 275 aa6.91□□□□□ -1.3
CCM2-208ENST00000476594 Q6ZSN1 163 aa6.91□□□□□ -1.3
CCM2-208ENST00000476594 FER1L6-AS1Q8NA97 138 aa6.91□□□□□ -1.3
CCM2-208ENST00000476594 RMI2Q96E14 147 aa6.91□□□□□ -1.3
CCM2-208ENST00000476594 TPPP3Q9BW30 176 aa6.91□□□□□ -1.3
CCM2-208ENST00000476594 KIAA1109Q2LD37 5005 aa6.9□□□□□ -1.3
CCM2-208ENST00000476594 A0A087WTM6 91 aa6.9□□□□□ -1.3
CCM2-208ENST00000476594 A0A087WX48 190 aa6.9□□□□□ -1.3
CCM2-208ENST00000476594 TMEM250H0YL14 139 aa6.9□□□□□ -1.3
CCM2-208ENST00000476594 TRGC1P0CF51 173 aa6.9□□□□□ -1.3
CCM2-208ENST00000476594 ALKAL2Q6UX46 152 aa6.9□□□□□ -1.3
CCM2-208ENST00000476594 OR10G8Q8NGN5 311 aa6.9□□□□□ -1.3
CCM2-208ENST00000476594 Q9HAA7 133 aa6.9□□□□□ -1.3
CCM2-208ENST00000476594 RAB19A4D1S5 217 aa6.89□□□□□ -1.31
CCM2-208ENST00000476594 C19orf71A6NCJ1 209 aa6.89□□□□□ -1.31
CCM2-208ENST00000476594 RBFOX3A6NFN3 312 aa6.89□□□□□ -1.31
CCM2-208ENST00000476594 IGLV2-8P01709 118 aa6.88□□□□□ -1.31
CCM2-208ENST00000476594 UBE2D3P61077 147 aa6.88□□□□□ -1.31
CCM2-208ENST00000476594 UBE2D2P62837 147 aa6.88□□□□□ -1.31
CCM2-208ENST00000476594 SMIM15Q7Z3B0 74 aa6.88□□□□□ -1.31
CCM2-208ENST00000476594 DAZ4Q86SG3 579 aaKnown RBP6.88□□□□□ -1.31
CCM2-208ENST00000476594 NTN5Q8WTR8 489 aaPredicted RBP6.88□□□□□ -1.31
CCM2-208ENST00000476594 DAZ3Q9NR90 486 aaKnown RBP6.88□□□□□ -1.31
CCM2-208ENST00000476594 TNFRSF18Q9Y5U5 241 aa6.88□□□□□ -1.31
CCM2-208ENST00000476594 MUC21A0A0G2JKD1 596 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms