RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 CA1P00915 261 aaPredicted RBP4.57□□□□□ -1.68
CLDN4-205ENST00000476494 SMR3BP02814 79 aaPredicted RBP4.57□□□□□ -1.68
CLDN4-205ENST00000476494 IGLC6P0CF74 106 aa4.57□□□□□ -1.68
CLDN4-205ENST00000476494 S100A4P26447 101 aaKnown RBP4.57□□□□□ -1.68
CLDN4-205ENST00000476494 CTRLP40313 264 aa4.57□□□□□ -1.68
CLDN4-205ENST00000476494 APOC4P55056 127 aa4.57□□□□□ -1.68
CLDN4-205ENST00000476494 ZNF124Q15973 351 aa4.57□□□□□ -1.68
CLDN4-205ENST00000476494 ANXA2RQ3ZCQ2 193 aa4.57□□□□□ -1.68
CLDN4-205ENST00000476494 PRR9Q5T870 116 aa4.57□□□□□ -1.68
CLDN4-205ENST00000476494 CNFNQ9BYD5 112 aa4.57□□□□□ -1.68
CLDN4-205ENST00000476494 CSTL1Q9H114 145 aa4.57□□□□□ -1.68
CLDN4-205ENST00000476494 C11orf21Q9P2W6 132 aa4.57□□□□□ -1.68
CLDN4-205ENST00000476494 TRAV12-2A0A075B6T6 113 aa4.56□□□□□ -1.68
CLDN4-205ENST00000476494 TMSB15BA0A087X1C1 80 aa4.56□□□□□ -1.68
CLDN4-205ENST00000476494 J3KRW8 73 aa4.56□□□□□ -1.68
CLDN4-205ENST00000476494 DEFB4AO15263 64 aa4.56□□□□□ -1.68
CLDN4-205ENST00000476494 SNAI2O43623 268 aa4.56□□□□□ -1.68
CLDN4-205ENST00000476494 HLA-DQA1P01909 254 aa4.56□□□□□ -1.68
CLDN4-205ENST00000476494 RPS10P46783 165 aaKnown RBP4.56□□□□□ -1.68
CLDN4-205ENST00000476494 TCL1AP56279 114 aa4.56□□□□□ -1.68
CLDN4-205ENST00000476494 HBBP68871 147 aa4.56□□□□□ -1.68
CLDN4-205ENST00000476494 PIK3CD-AS1Q5SR53 167 aa4.56□□□□□ -1.68
CLDN4-205ENST00000476494 LYZL1Q6UWQ5 148 aa4.56□□□□□ -1.68
CLDN4-205ENST00000476494 Q6ZTC4 211 aa4.56□□□□□ -1.68
CLDN4-205ENST00000476494 SMIM15Q7Z3B0 74 aa4.56□□□□□ -1.68
CLDN4-205ENST00000476494 PTH2Q96A98 100 aa4.56□□□□□ -1.68
CLDN4-205ENST00000476494 PGLYRP4Q96LB8 373 aa4.56□□□□□ -1.68
CLDN4-205ENST00000476494 LINC01587Q99440 93 aa4.56□□□□□ -1.68
CLDN4-205ENST00000476494 TMEM208Q9BTX3 173 aa4.56□□□□□ -1.68
CLDN4-205ENST00000476494 NDUFAF3Q9BU61 184 aa4.56□□□□□ -1.68
CLDN4-205ENST00000476494 NAGKQ9UJ70 344 aa4.56□□□□□ -1.68
CLDN4-205ENST00000476494 TRAV10A0A0B4J240 114 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 IGHV3-16A0A0C4DH30 117 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 A0A1B0GXF2 115 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 GRIFINA4D1Z8 144 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 SMIM9A6NGZ8 99 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 CBY3A6NI87 242 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 C1orf196B1AJZ1 125 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 ARMS2P0C7Q2 107 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 GZMBP10144 247 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 RPL35AP18077 110 aaKnown RBP4.55□□□□□ -1.68
CLDN4-205ENST00000476494 KIR3DS1Q14943 382 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 TWIST1Q15672 202 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 MUC21Q5SSG8 566 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 ZNF493Q6ZR52 646 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 Q6ZSN1 163 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.55□□□□□ -1.68
CLDN4-205ENST00000476494 GATD1Q8NB37 220 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 SPXQ9BT56 116 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 TPPP3Q9BW30 176 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 XCL2Q9UBD3 114 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 PHLDA3Q9Y5J5 127 aa4.55□□□□□ -1.68
CLDN4-205ENST00000476494 GNRH2O43555 120 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 SPINK4O60575 86 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 NXPH4O95158 308 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 GIG44P09565 113 aaPredicted RBP4.54□□□□□ -1.68
CLDN4-205ENST00000476494 TRGC1P0CF51 173 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 NTF3P20783 257 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 CAMPP49913 170 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 FXYD7P58549 80 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 RAB4BP61018 213 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 RAB5BP61020 215 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 ZNF415Q09FC8 603 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 SPANXN1Q5VSR9 72 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 MRPL54Q6P161 138 aaKnown RBP4.54□□□□□ -1.68
CLDN4-205ENST00000476494 ZNF705AQ6ZN79 300 aaPredicted RBP4.54□□□□□ -1.68
CLDN4-205ENST00000476494 TMEM136Q6ZRR5 245 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 ZFP82Q8N141 532 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 C1orf158Q8N1D5 194 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 C6orf223Q8N319 242 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 Q8NAQ8 132 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 CSNK1G2-AS1Q8NCQ2 148 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 OR11H2Q8NH07 326 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 C9orf85Q96MD7 179 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 TMEM191AQ9H0A3 160 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 TRAPPC1Q9Y5R8 145 aa4.54□□□□□ -1.68
CLDN4-205ENST00000476494 SNURFLB1AK76 121 aa4.53□□□□□ -1.68
CLDN4-205ENST00000476494 H3BVH4 76 aa4.53□□□□□ -1.68
CLDN4-205ENST00000476494 APCSP02743 223 aa4.53□□□□□ -1.68
CLDN4-205ENST00000476494 RNASE3P12724 160 aaKnown RBP4.53□□□□□ -1.68
CLDN4-205ENST00000476494 FABP9Q0Z7S8 132 aa4.53□□□□□ -1.68
CLDN4-205ENST00000476494 RRN3P1Q2M238 152 aa4.53□□□□□ -1.68
CLDN4-205ENST00000476494 Q6ZQT7 251 aa4.53□□□□□ -1.68
CLDN4-205ENST00000476494 TMEM263Q8WUH6 116 aaKnown RBP4.53□□□□□ -1.68
CLDN4-205ENST00000476494 C16orf74Q96GX8 76 aa4.53□□□□□ -1.68
CLDN4-205ENST00000476494 MRPL18Q9H0U6 180 aaKnown RBP4.53□□□□□ -1.68
CLDN4-205ENST00000476494 FAM229AH3BQW9 127 aa4.52□□□□□ -1.69
CLDN4-205ENST00000476494 M0R2P5 195 aa4.52□□□□□ -1.69
CLDN4-205ENST00000476494 CIDEAO60543 219 aa4.52□□□□□ -1.69
CLDN4-205ENST00000476494 PPBPP02775 128 aa4.52□□□□□ -1.69
CLDN4-205ENST00000476494 TRGC2P03986 189 aa4.52□□□□□ -1.69
CLDN4-205ENST00000476494 SMIM17P0DL12 118 aa4.52□□□□□ -1.69
CLDN4-205ENST00000476494 BTF3P20290 206 aaKnown RBP4.52□□□□□ -1.69
CLDN4-205ENST00000476494 DAZ2Q13117 558 aaKnown RBP4.52□□□□□ -1.69
CLDN4-205ENST00000476494 DMRTA1Q5VZB9 504 aa4.52□□□□□ -1.69
CLDN4-205ENST00000476494 OR10AG1Q8NH19 301 aa4.52□□□□□ -1.69
CLDN4-205ENST00000476494 AP1S3Q96PC3 154 aa4.52□□□□□ -1.69
CLDN4-205ENST00000476494 IGHV3OR16-12A0A075B7B8 117 aa4.51□□□□□ -1.69
CLDN4-205ENST00000476494 DEFB131BA0A096LNP1 70 aa4.51□□□□□ -1.69
CLDN4-205ENST00000476494 A8MWV9 139 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms