RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 JPT2Q9H910 190 aa7.72□□□□□ -1.17
NUDCD3-206ENST00000475952 SCRT2Q9NQ03 307 aa7.72□□□□□ -1.17
NUDCD3-206ENST00000475952 GNG13Q9P2W3 67 aa7.72□□□□□ -1.17
NUDCD3-206ENST00000475952 GAGE12JA6NER3 117 aa7.71□□□□□ -1.18
NUDCD3-206ENST00000475952 IFNA1P01562 189 aa7.71□□□□□ -1.18
NUDCD3-206ENST00000475952 CXCL1P09341 107 aa7.71□□□□□ -1.18
NUDCD3-206ENST00000475952 RPL35P42766 123 aaKnown RBP7.71□□□□□ -1.18
NUDCD3-206ENST00000475952 SULT1A2P50226 295 aa7.71□□□□□ -1.18
NUDCD3-206ENST00000475952 GAGE1Q13065 139 aa7.71□□□□□ -1.18
NUDCD3-206ENST00000475952 GAGE4Q13068 117 aa7.71□□□□□ -1.18
NUDCD3-206ENST00000475952 GAGE5Q13069 117 aa7.71□□□□□ -1.18
NUDCD3-206ENST00000475952 GAGE13Q4V321 117 aa7.71□□□□□ -1.18
NUDCD3-206ENST00000475952 PRR27Q6MZM9 219 aa7.71□□□□□ -1.18
NUDCD3-206ENST00000475952 UFSP1Q6NVU6 142 aa7.71□□□□□ -1.18
NUDCD3-206ENST00000475952 SLC51BQ86UW2 128 aa7.71□□□□□ -1.18
NUDCD3-206ENST00000475952 SFRP2Q96HF1 295 aa7.71□□□□□ -1.18
NUDCD3-206ENST00000475952 MLST8Q9BVC4 326 aa7.71□□□□□ -1.18
NUDCD3-206ENST00000475952 UBR4Q5T4S7 5183 aa7.71□□□□□ -1.18
NUDCD3-206ENST00000475952 LINC00694P0DN24 101 aa7.7□□□□□ -1.18
NUDCD3-206ENST00000475952 RPL19P84098 196 aaKnown RBP7.7□□□□□ -1.18
NUDCD3-206ENST00000475952 Q6ZNX1 250 aa7.7□□□□□ -1.18
NUDCD3-206ENST00000475952 Q6ZSN1 163 aa7.7□□□□□ -1.18
NUDCD3-206ENST00000475952 AKAP14Q86UN6 197 aa7.7□□□□□ -1.18
NUDCD3-206ENST00000475952 C11orf52Q96A22 123 aa7.7□□□□□ -1.18
NUDCD3-206ENST00000475952 SAMD10Q9BYL1 202 aa7.7□□□□□ -1.18
NUDCD3-206ENST00000475952 TNFRSF18Q9Y5U5 241 aa7.7□□□□□ -1.18
NUDCD3-206ENST00000475952 A0A087WWL8 130 aa7.69□□□□□ -1.18
NUDCD3-206ENST00000475952 PSCAO43653 123 aa7.69□□□□□ -1.18
NUDCD3-206ENST00000475952 KRTAP10-2P60368 255 aa7.69□□□□□ -1.18
NUDCD3-206ENST00000475952 MEF2BQ02080 365 aaPredicted RBP7.69□□□□□ -1.18
NUDCD3-206ENST00000475952 CDPF1Q6NVV7 123 aa7.69□□□□□ -1.18
NUDCD3-206ENST00000475952 C14orf178Q8N769 122 aaPredicted RBP7.69□□□□□ -1.18
NUDCD3-206ENST00000475952 A0A087WTM6 91 aa7.68□□□□□ -1.18
NUDCD3-206ENST00000475952 A0A087WWC5 75 aa7.68□□□□□ -1.18
NUDCD3-206ENST00000475952 IBA57-AS1B1ANH7 110 aa7.68□□□□□ -1.18
NUDCD3-206ENST00000475952 PDE6DO43924 150 aa7.68□□□□□ -1.18
NUDCD3-206ENST00000475952 CCL20P78556 96 aa7.68□□□□□ -1.18
NUDCD3-206ENST00000475952 LAGE3Q14657 143 aa7.68□□□□□ -1.18
NUDCD3-206ENST00000475952 CENPWQ5EE01 88 aa7.68□□□□□ -1.18
NUDCD3-206ENST00000475952 OR10AG1Q8NH19 301 aa7.68□□□□□ -1.18
NUDCD3-206ENST00000475952 SMIM12Q96EX1 92 aa7.68□□□□□ -1.18
NUDCD3-206ENST00000475952 DERL1Q9BUN8 251 aa7.68□□□□□ -1.18
NUDCD3-206ENST00000475952 TRBV10-1A0A0K0K1A3 114 aa7.67□□□□□ -1.18
NUDCD3-206ENST00000475952 SNAI2O43623 268 aa7.67□□□□□ -1.18
NUDCD3-206ENST00000475952 IGHV3-30P01768 117 aa7.67□□□□□ -1.18
NUDCD3-206ENST00000475952 IGHV3-33P01772 117 aa7.67□□□□□ -1.18
NUDCD3-206ENST00000475952 OR5AL1P0C617 328 aa7.67□□□□□ -1.18
NUDCD3-206ENST00000475952 IGHV3-30-3P0DP02 117 aa7.67□□□□□ -1.18
NUDCD3-206ENST00000475952 IGHV3-30-5P0DP03 117 aa7.67□□□□□ -1.18
NUDCD3-206ENST00000475952 BCL2P10415 239 aa7.67□□□□□ -1.18
NUDCD3-206ENST00000475952 TAGLN2P37802 199 aaKnown RBP7.67□□□□□ -1.18
NUDCD3-206ENST00000475952 GNG4P50150 75 aa7.67□□□□□ -1.18
NUDCD3-206ENST00000475952 RPL36AP83881 106 aaKnown RBP7.67□□□□□ -1.18
NUDCD3-206ENST00000475952 ZNF56Q15929 161 aa7.67□□□□□ -1.18
NUDCD3-206ENST00000475952 SPANXN1Q5VSR9 72 aa7.67□□□□□ -1.18
NUDCD3-206ENST00000475952 RPL36ALQ969Q0 106 aaKnown RBP7.67□□□□□ -1.18
NUDCD3-206ENST00000475952 PGPEP1Q9NXJ5 209 aa7.67□□□□□ -1.18
NUDCD3-206ENST00000475952 FLG2Q5D862 2391 aaPredicted RBP7.66□□□□□ -1.18
NUDCD3-206ENST00000475952 hCG_2014768A0A024R1R8 64 aa7.66□□□□□ -1.18
NUDCD3-206ENST00000475952 C9orf62Q8N4C0 152 aa7.66□□□□□ -1.18
NUDCD3-206ENST00000475952 DAZAP1Q96EP5 407 aaKnown RBP7.66□□□□□ -1.18
NUDCD3-206ENST00000475952 SSBP4Q9BWG4 385 aaPredicted RBP7.66□□□□□ -1.18
NUDCD3-206ENST00000475952 Q9HAA7 133 aa7.66□□□□□ -1.18
NUDCD3-206ENST00000475952 URGCP-MRPS24S4R325 110 aa7.66□□□□□ -1.18
NUDCD3-206ENST00000475952 TRBV7-3A0A075B6L6 115 aa7.65□□□□□ -1.18
NUDCD3-206ENST00000475952 SMIM17P0DL12 118 aa7.65□□□□□ -1.18
NUDCD3-206ENST00000475952 RPS20P60866 119 aaKnown RBP7.65□□□□□ -1.18
NUDCD3-206ENST00000475952 RAB4BP61018 213 aa7.65□□□□□ -1.18
NUDCD3-206ENST00000475952 TOR2AQ5JU69 321 aa7.65□□□□□ -1.18
NUDCD3-206ENST00000475952 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.65□□□□□ -1.18
NUDCD3-206ENST00000475952 AP1S3Q96PC3 154 aa7.65□□□□□ -1.18
NUDCD3-206ENST00000475952 BIN3Q9NQY0 253 aa7.65□□□□□ -1.18
NUDCD3-206ENST00000475952 MED9Q9NWA0 146 aa7.65□□□□□ -1.18
NUDCD3-206ENST00000475952 Q9UF83 564 aa7.65□□□□□ -1.18
NUDCD3-206ENST00000475952 VAX2Q9UIW0 290 aa7.65□□□□□ -1.18
NUDCD3-206ENST00000475952 XKRY2A2RUG3 117 aa7.64□□□□□ -1.19
NUDCD3-206ENST00000475952 TM2D2Q9BX73 214 aa7.64□□□□□ -1.19
NUDCD3-206ENST00000475952 TRAV8-3A0A0A6YYJ7 113 aa7.63□□□□□ -1.19
NUDCD3-206ENST00000475952 MUC21A0A0G2JKD1 596 aa7.63□□□□□ -1.19
NUDCD3-206ENST00000475952 MUC21A0A140T8X8 626 aa7.63□□□□□ -1.19
NUDCD3-206ENST00000475952 RAB19A4D1S5 217 aa7.63□□□□□ -1.19
NUDCD3-206ENST00000475952 C19orf71A6NCJ1 209 aa7.63□□□□□ -1.19
NUDCD3-206ENST00000475952 IGLV2-8P01709 118 aa7.63□□□□□ -1.19
NUDCD3-206ENST00000475952 P01737 135 aa7.63□□□□□ -1.19
NUDCD3-206ENST00000475952 UBE2D3P61077 147 aa7.63□□□□□ -1.19
NUDCD3-206ENST00000475952 UBE2D2P62837 147 aa7.63□□□□□ -1.19
NUDCD3-206ENST00000475952 KCNIP4Q6PIL6 250 aa7.63□□□□□ -1.19
NUDCD3-206ENST00000475952 FER1L6-AS1Q8NA97 138 aa7.63□□□□□ -1.19
NUDCD3-206ENST00000475952 OR2D3Q8NGH3 330 aa7.63□□□□□ -1.19
NUDCD3-206ENST00000475952 OR10G8Q8NGN5 311 aa7.63□□□□□ -1.19
NUDCD3-206ENST00000475952 TPPP3Q9BW30 176 aa7.63□□□□□ -1.19
NUDCD3-206ENST00000475952 F5H697 171 aa7.62□□□□□ -1.19
NUDCD3-206ENST00000475952 IGLC6P0CF74 106 aa7.62□□□□□ -1.19
NUDCD3-206ENST00000475952 SSTP61278 116 aa7.62□□□□□ -1.19
NUDCD3-206ENST00000475952 NIT1Q86X76 327 aa7.62□□□□□ -1.19
NUDCD3-206ENST00000475952 Q8N3U1 123 aa7.62□□□□□ -1.19
NUDCD3-206ENST00000475952 NTN5Q8WTR8 489 aaPredicted RBP7.62□□□□□ -1.19
NUDCD3-206ENST00000475952 CHCHD7Q9BUK0 85 aa7.62□□□□□ -1.19
NUDCD3-206ENST00000475952 TRBV20OR9-2A0A075B6H5 130 aa7.61□□□□□ -1.19
NUDCD3-206ENST00000475952 A0A087WX48 190 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms