RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 HSPB8Q9UJY1 196 aa13.27□□□□□ -0.28
ATG4B-217ENST00000475693 CDKN1BP46527 198 aa13.27□□□□□ -0.29
ATG4B-217ENST00000475693 Q8N1Y9 231 aa13.27□□□□□ -0.29
ATG4B-217ENST00000475693 MAP1LC3CQ9BXW4 147 aa13.27□□□□□ -0.29
ATG4B-217ENST00000475693 HSBP1L1C9JCN9 74 aa13.26□□□□□ -0.29
ATG4B-217ENST00000475693 SLC25A34Q6PIV7 304 aa13.26□□□□□ -0.29
ATG4B-217ENST00000475693 TRPT1Q86TN4 253 aaKnown RBP13.26□□□□□ -0.29
ATG4B-217ENST00000475693 GTSCR1Q86UQ5 136 aa13.26□□□□□ -0.29
ATG4B-217ENST00000475693 LENEPQ9Y5L5 61 aa13.26□□□□□ -0.29
ATG4B-217ENST00000475693 TPPP3Q9BW30 176 aa13.25□□□□□ -0.29
ATG4B-217ENST00000475693 PRB2P02812 416 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-217ENST00000475693 HTN1P15515 57 aa13.25□□□□□ -0.29
ATG4B-217ENST00000475693 TMEM189A5PLL7 270 aa13.24□□□□□ -0.29
ATG4B-217ENST00000475693 GNRH2O43555 120 aa13.24□□□□□ -0.29
ATG4B-217ENST00000475693 Q6AWC8 147 aa13.24□□□□□ -0.29
ATG4B-217ENST00000475693 A8MTW9 85 aa13.24□□□□□ -0.29
ATG4B-217ENST00000475693 WIPF1O43516 503 aa13.24□□□□□ -0.29
ATG4B-217ENST00000475693 GIG44P09565 113 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-217ENST00000475693 LEPP41159 167 aa13.24□□□□□ -0.29
ATG4B-217ENST00000475693 ANXA2RQ3ZCQ2 193 aa13.24□□□□□ -0.29
ATG4B-217ENST00000475693 A0A1B0GUT8 65 aa13.23□□□□□ -0.29
ATG4B-217ENST00000475693 C7orf71A4D174 169 aa13.23□□□□□ -0.29
ATG4B-217ENST00000475693 SCRT2Q9NQ03 307 aa13.23□□□□□ -0.29
ATG4B-217ENST00000475693 PRSS47A8MTI9 375 aa13.23□□□□□ -0.29
ATG4B-217ENST00000475693 RBX1P62877 108 aa13.23□□□□□ -0.29
ATG4B-217ENST00000475693 RIGQ13278 110 aa13.23□□□□□ -0.29
ATG4B-217ENST00000475693 LINC01545Q5VT33 79 aa13.23□□□□□ -0.29
ATG4B-217ENST00000475693 TIMM8BQ9Y5J9 83 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-217ENST00000475693 PMCHL2Q9BQD1 86 aa13.22□□□□□ -0.29
ATG4B-217ENST00000475693 IGHV3OR16-12A0A075B7B8 117 aa13.21□□□□□ -0.29
ATG4B-217ENST00000475693 TRAV21A0A0B4J279 112 aa13.21□□□□□ -0.29
ATG4B-217ENST00000475693 MPV17L2Q567V2 206 aa13.21□□□□□ -0.29
ATG4B-217ENST00000475693 BVES-AS1Q5T3Y7 98 aa13.21□□□□□ -0.29
ATG4B-217ENST00000475693 ODF3Q96PU9 254 aa13.21□□□□□ -0.29
ATG4B-217ENST00000475693 LINC00173Q6ZV60 143 aa13.21□□□□□ -0.29
ATG4B-217ENST00000475693 FAM110AQ9BQ89 295 aa13.21□□□□□ -0.29
ATG4B-217ENST00000475693 OR4C5Q8NGB2 326 aa13.2□□□□□ -0.3
ATG4B-217ENST00000475693 TRBV7-9A0A0J9YWB2 115 aa13.2□□□□□ -0.3
ATG4B-217ENST00000475693 TAX1BP3O14907 124 aa13.2□□□□□ -0.3
ATG4B-217ENST00000475693 CMC4P56277 68 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-217ENST00000475693 LINC01559Q495D7 138 aa13.2□□□□□ -0.3
ATG4B-217ENST00000475693 RNASE8Q8TDE3 154 aaKnown RBP13.2□□□□□ -0.3
ATG4B-217ENST00000475693 AP5S1Q9NUS5 200 aa13.2□□□□□ -0.3
ATG4B-217ENST00000475693 hDV102S1A0JD36 115 aa13.19□□□□□ -0.3
ATG4B-217ENST00000475693 NUDT3O95989 172 aa13.19□□□□□ -0.3
ATG4B-217ENST00000475693 ZNF493Q6ZR52 646 aa13.19□□□□□ -0.3
ATG4B-217ENST00000475693 LYZL1Q6UWQ5 148 aa13.18□□□□□ -0.3
ATG4B-217ENST00000475693 Q6ZVH6 145 aa13.18□□□□□ -0.3
ATG4B-217ENST00000475693 EGFEM1PQ0D2K5 195 aa13.17□□□□□ -0.3
ATG4B-217ENST00000475693 C1orf158Q8N1D5 194 aa13.17□□□□□ -0.3
ATG4B-217ENST00000475693 ARMS2P0C7Q2 107 aa13.17□□□□□ -0.3
ATG4B-217ENST00000475693 COX8AP10176 69 aa13.17□□□□□ -0.3
ATG4B-217ENST00000475693 VAMP3Q15836 100 aa13.17□□□□□ -0.3
ATG4B-217ENST00000475693 SAMD5Q5TGI4 173 aa13.17□□□□□ -0.3
ATG4B-217ENST00000475693 FAM159AQ6UWV7 190 aa13.17□□□□□ -0.3
ATG4B-217ENST00000475693 OR10AG1Q8NH19 301 aa13.17□□□□□ -0.3
ATG4B-217ENST00000475693 MDFICQ9P1T7 246 aa13.17□□□□□ -0.3
ATG4B-217ENST00000475693 H3BVH4 76 aa13.16□□□□□ -0.3
ATG4B-217ENST00000475693 IGHV4-30-4P0DP06 118 aa13.16□□□□□ -0.3
ATG4B-217ENST00000475693 RIPPLY3P57055 190 aa13.16□□□□□ -0.3
ATG4B-217ENST00000475693 LINC01587Q99440 93 aa13.16□□□□□ -0.3
ATG4B-217ENST00000475693 MSRB1Q9NZV6 116 aa13.16□□□□□ -0.3
ATG4B-217ENST00000475693 TMEM238LA0A1B0GVL6 79 aa13.16□□□□□ -0.3
ATG4B-217ENST00000475693 AZU1P20160 251 aa13.15□□□□□ -0.3
ATG4B-217ENST00000475693 IGHV1OR15-1A0A075B7D0 117 aa13.15□□□□□ -0.31
ATG4B-217ENST00000475693 FA2HQ7L5A8 372 aa13.15□□□□□ -0.31
ATG4B-217ENST00000475693 CLUHP3Q96NS8 147 aa13.15□□□□□ -0.31
ATG4B-217ENST00000475693 U3KQK5 164 aa13.15□□□□□ -0.31
ATG4B-217ENST00000475693 INSP01308 110 aa13.14□□□□□ -0.31
ATG4B-217ENST00000475693 IGLC6P0CF74 106 aa13.14□□□□□ -0.31
ATG4B-217ENST00000475693 FER1L6-AS1Q8NA97 138 aa13.14□□□□□ -0.31
ATG4B-217ENST00000475693 MUC4Q99102 2169 aa13.13□□□□□ -0.31
ATG4B-217ENST00000475693 RNASE3P12724 160 aaKnown RBP13.13□□□□□ -0.31
ATG4B-217ENST00000475693 SEC11AP67812 179 aa13.13□□□□□ -0.31
ATG4B-217ENST00000475693 CSTL1Q9H114 145 aa13.13□□□□□ -0.31
ATG4B-217ENST00000475693 CBY3A6NI87 242 aa13.13□□□□□ -0.31
ATG4B-217ENST00000475693 PPBPP02775 128 aa13.13□□□□□ -0.31
ATG4B-217ENST00000475693 CSNK1G2-AS1Q8NCQ2 148 aa13.13□□□□□ -0.31
ATG4B-217ENST00000475693 S100A4P26447 101 aaKnown RBP13.12□□□□□ -0.31
ATG4B-217ENST00000475693 PRSS3P2Q8NHM4 247 aa13.12□□□□□ -0.31
ATG4B-217ENST00000475693 LGALS9BQ3B8N2 356 aa13.11□□□□□ -0.31
ATG4B-217ENST00000475693 LGALS9CQ6DKI2 356 aa13.11□□□□□ -0.31
ATG4B-217ENST00000475693 IGHV3-16A0A0C4DH30 117 aa13.11□□□□□ -0.31
ATG4B-217ENST00000475693 ASIPP42127 132 aa13.11□□□□□ -0.31
ATG4B-217ENST00000475693 C2orf91Q6ZV80 131 aa13.11□□□□□ -0.31
ATG4B-217ENST00000475693 TP73-AS1Q9UF72 201 aa13.1□□□□□ -0.31
ATG4B-217ENST00000475693 M0R381 172 aa13.09□□□□□ -0.31
ATG4B-217ENST00000475693 DEFB135Q30KP9 77 aa13.09□□□□□ -0.31
ATG4B-217ENST00000475693 FAM104BQ5XKR9 115 aa13.09□□□□□ -0.31
ATG4B-217ENST00000475693 A0A096LNJ9 63 aa13.09□□□□□ -0.31
ATG4B-217ENST00000475693 TWIST1Q15672 202 aa13.09□□□□□ -0.31
ATG4B-217ENST00000475693 SIVA1O15304 175 aa13.08□□□□□ -0.32
ATG4B-217ENST00000475693 ORMDL3Q8N138 153 aa13.08□□□□□ -0.32
ATG4B-217ENST00000475693 FGF6P10767 208 aa13.08□□□□□ -0.32
ATG4B-217ENST00000475693 TMEM97Q5BJF2 176 aa13.08□□□□□ -0.32
ATG4B-217ENST00000475693 MORN3Q6PF18 240 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-217ENST00000475693 CST9LQ9H4G1 147 aa13.08□□□□□ -0.32
ATG4B-217ENST00000475693 JPT2Q9H910 190 aa13.08□□□□□ -0.32
ATG4B-217ENST00000475693 IFI27P40305 119 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-217ENST00000475693 AMMECR1LQ6DCA0 310 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms