RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 GAGE2EQ4V326 116 aa13.37□□□□□ -0.27
CCM2-207ENST00000475551 TMEM170BQ5T4T1 132 aa13.37□□□□□ -0.27
CCM2-207ENST00000475551 LINC01600Q96MT4 127 aa13.37□□□□□ -0.27
CCM2-207ENST00000475551 GAGE2DQ9UEU5 116 aa13.37□□□□□ -0.27
CCM2-207ENST00000475551 POLR2KP53803 58 aaKnown RBP13.36□□□□□ -0.27
CCM2-207ENST00000475551 ZNF876PQ49A33 203 aa13.36□□□□□ -0.27
CCM2-207ENST00000475551 KMT2BQ9UMN6 2715 aaPredicted RBP13.36□□□□□ -0.27
CCM2-207ENST00000475551 A0A0B4J2C4 111 aa13.36□□□□□ -0.27
CCM2-207ENST00000475551 OVOL1O14753 267 aa13.36□□□□□ -0.27
CCM2-207ENST00000475551 NXPH4O95158 308 aa13.36□□□□□ -0.27
CCM2-207ENST00000475551 RNASE3P12724 160 aaKnown RBP13.36□□□□□ -0.27
CCM2-207ENST00000475551 CRIP2P52943 208 aaPredicted RBP13.36□□□□□ -0.27
CCM2-207ENST00000475551 OR10J6PQ8NGY7 276 aa13.36□□□□□ -0.27
CCM2-207ENST00000475551 ZNRF2Q8NHG8 242 aa13.36□□□□□ -0.27
CCM2-207ENST00000475551 TMEM263Q8WUH6 116 aaKnown RBP13.36□□□□□ -0.27
CCM2-207ENST00000475551 KIF25-AS1Q9Y6Z4 181 aa13.36□□□□□ -0.27
CCM2-207ENST00000475551 CFAP46Q8IYW2 2715 aa13.35□□□□□ -0.27
CCM2-207ENST00000475551 A4D1N5 150 aa13.35□□□□□ -0.27
CCM2-207ENST00000475551 B5MCH6 92 aa13.35□□□□□ -0.27
CCM2-207ENST00000475551 SNCGO76070 127 aa13.35□□□□□ -0.27
CCM2-207ENST00000475551 LGALS3P17931 250 aaKnown RBP13.35□□□□□ -0.27
CCM2-207ENST00000475551 LINC00315P59091 139 aa13.35□□□□□ -0.27
CCM2-207ENST00000475551 Q6Q795 121 aa13.35□□□□□ -0.27
CCM2-207ENST00000475551 ARHGAP32A7KAX9 2087 aa13.35□□□□□ -0.27
CCM2-207ENST00000475551 NDUFV3P56181 108 aaKnown RBP13.35□□□□□ -0.27
CCM2-207ENST00000475551 TRPT1Q86TN4 253 aaKnown RBP13.35□□□□□ -0.27
CCM2-207ENST00000475551 ZNF843Q8N446 348 aa13.35□□□□□ -0.27
CCM2-207ENST00000475551 RAX2Q96IS3 184 aa13.35□□□□□ -0.27
CCM2-207ENST00000475551 EIF4EBP3O60516 100 aaPredicted RBP13.34□□□□□ -0.27
CCM2-207ENST00000475551 APRG1Q8IVJ8 170 aa13.34□□□□□ -0.27
CCM2-207ENST00000475551 FAM19A4Q96LR4 140 aa13.34□□□□□ -0.27
CCM2-207ENST00000475551 VCYO14598 125 aa13.34□□□□□ -0.27
CCM2-207ENST00000475551 LY6HO94772 140 aa13.34□□□□□ -0.27
CCM2-207ENST00000475551 RPL39P62891 51 aaKnown RBP13.34□□□□□ -0.27
CCM2-207ENST00000475551 ADGRG4Q8IZF6 3080 aa13.33□□□□□ -0.28
CCM2-207ENST00000475551 CCL21O00585 134 aa13.33□□□□□ -0.28
CCM2-207ENST00000475551 GNRH2O43555 120 aa13.33□□□□□ -0.28
CCM2-207ENST00000475551 GNLYP22749 145 aa13.33□□□□□ -0.28
CCM2-207ENST00000475551 G3V318 75 aa13.33□□□□□ -0.28
CCM2-207ENST00000475551 Q8N1Y9 231 aa13.33□□□□□ -0.28
CCM2-207ENST00000475551 TRAV4A0A0B4J268 109 aa13.32□□□□□ -0.28
CCM2-207ENST00000475551 CFAP161Q6P656 301 aa13.32□□□□□ -0.28
CCM2-207ENST00000475551 LEPROTO15243 131 aa13.32□□□□□ -0.28
CCM2-207ENST00000475551 ARL3P36405 182 aa13.32□□□□□ -0.28
CCM2-207ENST00000475551 RPL13AP40429 203 aaKnown RBP13.32□□□□□ -0.28
CCM2-207ENST00000475551 ATXN8Q156A1 80 aa13.32□□□□□ -0.28
CCM2-207ENST00000475551 LINC01560Q8TB33 94 aa13.32□□□□□ -0.28
CCM2-207ENST00000475551 NTN5Q8WTR8 489 aaPredicted RBP13.32□□□□□ -0.28
CCM2-207ENST00000475551 WNK2Q9Y3S1 2297 aa13.31□□□□□ -0.28
CCM2-207ENST00000475551 SOCS3O14543 225 aa13.31□□□□□ -0.28
CCM2-207ENST00000475551 RNASE4P34096 147 aaKnown RBP13.31□□□□□ -0.28
CCM2-207ENST00000475551 TACC2O95359 2948 aa13.31□□□□□ -0.28
CCM2-207ENST00000475551 POLEQ07864 2286 aa13.31□□□□□ -0.28
CCM2-207ENST00000475551 TRBV7-9A0A0J9YWB2 115 aa13.31□□□□□ -0.28
CCM2-207ENST00000475551 GAGE12JA6NER3 117 aa13.31□□□□□ -0.28
CCM2-207ENST00000475551 GAGE7O76087 117 aa13.31□□□□□ -0.28
CCM2-207ENST00000475551 GAGE12FP0CL80 117 aa13.31□□□□□ -0.28
CCM2-207ENST00000475551 GAGE12GP0CL81 117 aa13.31□□□□□ -0.28
CCM2-207ENST00000475551 GAGE12IP0CL82 117 aa13.31□□□□□ -0.28
CCM2-207ENST00000475551 IFITM1P13164 125 aa13.31□□□□□ -0.28
CCM2-207ENST00000475551 GAGE4Q13068 117 aa13.31□□□□□ -0.28
CCM2-207ENST00000475551 PCNX1Q96RV3 2341 aa13.31□□□□□ -0.28
CCM2-207ENST00000475551 CSMD1Q96PZ7 3565 aa13.3□□□□□ -0.28
CCM2-207ENST00000475551 NBASA2RRP1 2371 aa13.3□□□□□ -0.28
CCM2-207ENST00000475551 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.3□□□□□ -0.28
CCM2-207ENST00000475551 CRLF1O75462 422 aa13.3□□□□□ -0.28
CCM2-207ENST00000475551 LINC01620Q4KN68 170 aa13.3□□□□□ -0.28
CCM2-207ENST00000475551 TTC32Q5I0X7 151 aa13.3□□□□□ -0.28
CCM2-207ENST00000475551 SUMO4Q6EEV6 95 aa13.3□□□□□ -0.28
CCM2-207ENST00000475551 TMEM223A0PJW6 202 aa13.3□□□□□ -0.28
CCM2-207ENST00000475551 TRBV27A0A0K0K1C4 114 aa13.29□□□□□ -0.28
CCM2-207ENST00000475551 MUSTN1Q8IVN3 82 aa13.29□□□□□ -0.28
CCM2-207ENST00000475551 TRAV2A0A0B4J234 112 aa13.28□□□□□ -0.28
CCM2-207ENST00000475551 SDHAF1A6NFY7 115 aa13.28□□□□□ -0.28
CCM2-207ENST00000475551 IGHV1-69P01742 117 aa13.28□□□□□ -0.28
CCM2-207ENST00000475551 A0A0J9YX75 114 aa13.28□□□□□ -0.28
CCM2-207ENST00000475551 TRBV6-5A0A0K0K1A5 114 aa13.28□□□□□ -0.28
CCM2-207ENST00000475551 TRBV10-2A0A0K0K1G8 114 aa13.28□□□□□ -0.28
CCM2-207ENST00000475551 ADORA2A-AS1P86434 159 aa13.28□□□□□ -0.28
CCM2-207ENST00000475551 ODF3Q96PU9 254 aa13.28□□□□□ -0.28
CCM2-207ENST00000475551 SIRPDQ9H106 197 aa13.28□□□□□ -0.28
CCM2-207ENST00000475551 TRAV8-4A0A0B4J246 113 aa13.27□□□□□ -0.29
CCM2-207ENST00000475551 TRBV30A0A0K0K1B3 111 aa13.27□□□□□ -0.29
CCM2-207ENST00000475551 H7C2G1 150 aa13.27□□□□□ -0.29
CCM2-207ENST00000475551 DEFB1P60022 68 aa13.27□□□□□ -0.29
CCM2-207ENST00000475551 SPANXA1Q9NS26 97 aa13.27□□□□□ -0.29
CCM2-207ENST00000475551 CCDC179H3BU77 68 aa13.26□□□□□ -0.29
CCM2-207ENST00000475551 ELANEP08246 267 aa13.26□□□□□ -0.29
CCM2-207ENST00000475551 DEFB104AQ8WTQ1 72 aa13.26□□□□□ -0.29
CCM2-207ENST00000475551 M0R2P5 195 aa13.25□□□□□ -0.29
CCM2-207ENST00000475551 Q1RN00 199 aa13.25□□□□□ -0.29
CCM2-207ENST00000475551 FAM223BA6NKX1 122 aa13.25□□□□□ -0.29
CCM2-207ENST00000475551 LGALS9O00182 355 aa13.25□□□□□ -0.29
CCM2-207ENST00000475551 ZFP36P26651 326 aaKnown RBP13.25□□□□□ -0.29
CCM2-207ENST00000475551 FAM223AQ8IWN6 122 aa13.25□□□□□ -0.29
CCM2-207ENST00000475551 JPT2Q9H910 190 aa13.25□□□□□ -0.29
CCM2-207ENST00000475551 TEX49A0A1B0GTD5 131 aa13.24□□□□□ -0.29
CCM2-207ENST00000475551 UBE2E1P51965 193 aa13.24□□□□□ -0.29
CCM2-207ENST00000475551 CDSNQ15517 529 aa13.24□□□□□ -0.29
CCM2-207ENST00000475551 NSUN5P1Q3KNT7 163 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms