RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 TRBV7-3A0A075B6L6 115 aa11.3□□□□□ -0.6
RNF220-212ENST00000475378 A0A087WWL8 130 aa11.3□□□□□ -0.6
RNF220-212ENST00000475378 H3BVH4 76 aa11.3□□□□□ -0.6
RNF220-212ENST00000475378 RPL36AP83881 106 aaKnown RBP11.3□□□□□ -0.6
RNF220-212ENST00000475378 DNLZQ5SXM8 178 aa11.3□□□□□ -0.6
RNF220-212ENST00000475378 CLRN3Q8NCR9 226 aa11.3□□□□□ -0.6
RNF220-212ENST00000475378 RPL36ALQ969Q0 106 aaKnown RBP11.3□□□□□ -0.6
RNF220-212ENST00000475378 SFRP2Q96HF1 295 aa11.3□□□□□ -0.6
RNF220-212ENST00000475378 KIF25-AS1Q9Y6Z4 181 aa11.3□□□□□ -0.6
RNF220-212ENST00000475378 K7EQM0 130 aa11.29□□□□□ -0.6
RNF220-212ENST00000475378 HMGB3O15347 200 aaKnown RBP11.29□□□□□ -0.6
RNF220-212ENST00000475378 H2AFB2P0C5Z0 115 aa11.29□□□□□ -0.6
RNF220-212ENST00000475378 LRRC37A5PQ49AS3 106 aa11.29□□□□□ -0.6
RNF220-212ENST00000475378 OR10G8Q8NGN5 311 aa11.29□□□□□ -0.6
RNF220-212ENST00000475378 RBM38Q9H0Z9 239 aaKnown RBP11.29□□□□□ -0.6
RNF220-212ENST00000475378 PLAC8Q9NZF1 115 aa11.29□□□□□ -0.6
RNF220-212ENST00000475378 A0A1W2PPV4 95 aa11.28□□□□□ -0.6
RNF220-212ENST00000475378 CCDC160A6NGH7 325 aa11.28□□□□□ -0.6
RNF220-212ENST00000475378 SIX6O95475 246 aa11.28□□□□□ -0.6
RNF220-212ENST00000475378 ARMS2P0C7Q2 107 aa11.28□□□□□ -0.6
RNF220-212ENST00000475378 RAB2AP61019 212 aa11.28□□□□□ -0.6
RNF220-212ENST00000475378 SAPCD1Q5SSQ6 148 aa11.28□□□□□ -0.6
RNF220-212ENST00000475378 WDR73Q6P4I2 378 aa11.28□□□□□ -0.6
RNF220-212ENST00000475378 SUN5Q8TC36 379 aa11.28□□□□□ -0.6
RNF220-212ENST00000475378 HSPB11Q9Y547 144 aa11.28□□□□□ -0.6
RNF220-212ENST00000475378 SLPIP03973 132 aa11.27□□□□□ -0.61
RNF220-212ENST00000475378 ARL14EPLP0DKL9 152 aa11.27□□□□□ -0.61
RNF220-212ENST00000475378 OR11H4Q8NGC9 324 aa11.27□□□□□ -0.61
RNF220-212ENST00000475378 SCGB1C1Q8TD33 95 aa11.27□□□□□ -0.61
RNF220-212ENST00000475378 DPH3Q96FX2 82 aa11.27□□□□□ -0.61
RNF220-212ENST00000475378 KRTAP9-2Q9BYQ4 174 aa11.27□□□□□ -0.61
RNF220-212ENST00000475378 EPDR1Q9UM22 224 aa11.27□□□□□ -0.61
RNF220-212ENST00000475378 IGHV3-64A0A075B6Q5 118 aa11.26□□□□□ -0.61
RNF220-212ENST00000475378 FABP5P3A8MUU1 101 aa11.26□□□□□ -0.61
RNF220-212ENST00000475378 PRR3P79522 188 aaKnown RBP11.26□□□□□ -0.61
RNF220-212ENST00000475378 CLPSL2Q6UWE3 100 aa11.26□□□□□ -0.61
RNF220-212ENST00000475378 C7orf33Q8WU49 177 aa11.26□□□□□ -0.61
RNF220-212ENST00000475378 B4DEV8 164 aa11.25□□□□□ -0.61
RNF220-212ENST00000475378 PTTG1O95997 202 aa11.25□□□□□ -0.61
RNF220-212ENST00000475378 STAG3L2P0CL84 134 aa11.25□□□□□ -0.61
RNF220-212ENST00000475378 STAG3L3P0CL85 134 aa11.25□□□□□ -0.61
RNF220-212ENST00000475378 SMIM3Q9BZL3 60 aa11.25□□□□□ -0.61
RNF220-212ENST00000475378 hDV102S1A0JD36 115 aa11.24□□□□□ -0.61
RNF220-212ENST00000475378 KRBOX1C9JBD0 128 aa11.24□□□□□ -0.61
RNF220-212ENST00000475378 PKIAP61925 76 aa11.24□□□□□ -0.61
RNF220-212ENST00000475378 SUMO1P63165 101 aaKnown RBP11.24□□□□□ -0.61
RNF220-212ENST00000475378 LINC00269Q8N2A0 174 aa11.24□□□□□ -0.61
RNF220-212ENST00000475378 NEXN-AS1Q8NBZ9 246 aa11.24□□□□□ -0.61
RNF220-212ENST00000475378 CHCHD5Q9BSY4 110 aa11.24□□□□□ -0.61
RNF220-212ENST00000475378 WFDC1Q9HC57 220 aa11.24□□□□□ -0.61
RNF220-212ENST00000475378 ARL2-SNX15V9GYD0 113 aa11.24□□□□□ -0.61
RNF220-212ENST00000475378 RBX1P62877 108 aa11.23□□□□□ -0.61
RNF220-212ENST00000475378 NTM-AS1Q6ZSK4 140 aa11.23□□□□□ -0.61
RNF220-212ENST00000475378 TRAV34A0A0B4J273 112 aa11.22□□□□□ -0.61
RNF220-212ENST00000475378 GRIFINA4D1Z8 144 aa11.22□□□□□ -0.61
RNF220-212ENST00000475378 GCHFRP30047 84 aa11.22□□□□□ -0.61
RNF220-212ENST00000475378 CDC34P49427 236 aaPredicted RBP11.22□□□□□ -0.61
RNF220-212ENST00000475378 CRIP1P50238 77 aa11.22□□□□□ -0.61
RNF220-212ENST00000475378 PHLDA3Q9Y5J5 127 aa11.22□□□□□ -0.61
RNF220-212ENST00000475378 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.21□□□□□ -0.61
RNF220-212ENST00000475378 M0R036 132 aa11.21□□□□□ -0.61
RNF220-212ENST00000475378 M0R381 172 aa11.21□□□□□ -0.61
RNF220-212ENST00000475378 PRR27Q6MZM9 219 aa11.21□□□□□ -0.61
RNF220-212ENST00000475378 PPP1R1CQ8WVI7 109 aa11.21□□□□□ -0.61
RNF220-212ENST00000475378 CYCSP99999 105 aaKnown RBP11.2□□□□□ -0.62
RNF220-212ENST00000475378 IGLV10-54A0A075B6I4 117 aa11.19□□□□□ -0.62
RNF220-212ENST00000475378 TPT1P13693 172 aaKnown RBP11.19□□□□□ -0.62
RNF220-212ENST00000475378 RPL12P30050 165 aaKnown RBP11.19□□□□□ -0.62
RNF220-212ENST00000475378 H2BFSP57053 126 aa11.19□□□□□ -0.62
RNF220-212ENST00000475378 RAB4BP61018 213 aa11.19□□□□□ -0.62
RNF220-212ENST00000475378 REG3GQ6UW15 175 aa11.19□□□□□ -0.62
RNF220-212ENST00000475378 SPINK6Q6UWN8 80 aa11.19□□□□□ -0.62
RNF220-212ENST00000475378 ZFP82Q8N141 532 aa11.19□□□□□ -0.62
RNF220-212ENST00000475378 GTSF1Q8WW33 167 aa11.19□□□□□ -0.62
RNF220-212ENST00000475378 RAB24Q969Q5 203 aa11.19□□□□□ -0.62
RNF220-212ENST00000475378 AP5S1Q9NUS5 200 aa11.19□□□□□ -0.62
RNF220-212ENST00000475378 MUC2Q02817 5179 aa11.19□□□□□ -0.62
RNF220-212ENST00000475378 FAM240BA0A1B0GVZ2 78 aa11.18□□□□□ -0.62
RNF220-212ENST00000475378 GAGE6Q13070 117 aa11.18□□□□□ -0.62
RNF220-212ENST00000475378 COX8CQ7Z4L0 72 aa11.18□□□□□ -0.62
RNF220-212ENST00000475378 Q86TA4 180 aa11.18□□□□□ -0.62
RNF220-212ENST00000475378 VAX2Q9UIW0 290 aa11.18□□□□□ -0.62
RNF220-212ENST00000475378 MUC21A0A0G2JKD1 596 aa11.17□□□□□ -0.62
RNF220-212ENST00000475378 SH2D1AO60880 128 aa11.17□□□□□ -0.62
RNF220-212ENST00000475378 MPC2O95563 127 aa11.17□□□□□ -0.62
RNF220-212ENST00000475378 REG3AQ06141 175 aa11.17□□□□□ -0.62
RNF220-212ENST00000475378 TMEM167BQ9NRX6 74 aa11.17□□□□□ -0.62
RNF220-212ENST00000475378 COX6A2Q02221 97 aa11.16□□□□□ -0.62
RNF220-212ENST00000475378 SRSF9Q13242 221 aaKnown RBP eCLIP11.16□□□□□ -0.62
RNF220-212ENST00000475378 TMEM97Q5BJF2 176 aa11.16□□□□□ -0.62
RNF220-212ENST00000475378 TRAV8-4A0A0B4J246 113 aa11.15□□□□□ -0.62
RNF220-212ENST00000475378 TRBV6-1A0A0K0K1D8 114 aa11.15□□□□□ -0.62
RNF220-212ENST00000475378 A0A1W2PRE2 83 aa11.15□□□□□ -0.62
RNF220-212ENST00000475378 P01737 135 aa11.15□□□□□ -0.62
RNF220-212ENST00000475378 ZNF56Q15929 161 aa11.15□□□□□ -0.62
RNF220-212ENST00000475378 LINC01559Q495D7 138 aa11.15□□□□□ -0.62
RNF220-212ENST00000475378 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.15□□□□□ -0.62
RNF220-212ENST00000475378 C20orf203Q8NBC4 194 aa11.15□□□□□ -0.62
RNF220-212ENST00000475378 TMSB15BA0A087X1C1 80 aa11.14□□□□□ -0.63
RNF220-212ENST00000475378 MAJINQ3KP22 176 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms