RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 DEC1Q9P2X7 70 aa4.45□□□□□ -1.7
ECHDC1-215ENST00000475319 SCN3AQ9NY46 2000 aa4.44□□□□□ -1.7
ECHDC1-215ENST00000475319 SDK1Q7Z5N4 2213 aa4.44□□□□□ -1.7
ECHDC1-215ENST00000475319 TRBV10-3A0A0K0K1G6 114 aa4.44□□□□□ -1.7
ECHDC1-215ENST00000475319 ARMS2P0C7Q2 107 aa4.44□□□□□ -1.7
ECHDC1-215ENST00000475319 Q6ZVQ6 151 aa4.44□□□□□ -1.7
ECHDC1-215ENST00000475319 DYNAPQ8N1N2 210 aa4.44□□□□□ -1.7
ECHDC1-215ENST00000475319 C20orf197Q8N268 126 aa4.44□□□□□ -1.7
ECHDC1-215ENST00000475319 C6orf223Q8N319 242 aa4.44□□□□□ -1.7
ECHDC1-215ENST00000475319 C6orf106Q9H6K1 298 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-215ENST00000475319 UBE2D4Q9Y2X8 147 aa4.44□□□□□ -1.7
ECHDC1-215ENST00000475319 COL4A2P08572 1712 aa4.44□□□□□ -1.7
ECHDC1-215ENST00000475319 ARHGEF17Q96PE2 2063 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 NOTCH4Q99466 2003 aa4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 TRAV7A0A075B6U4 112 aa4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 IGKV1-6A0A0C4DH72 117 aa4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 IGLV5-39A0A0G2JS06 123 aa4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 TMEM30CPA0ZSE6 113 aa4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 M0R378 163 aa4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 NDUFA3O95167 84 aa4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 UBE2BP63146 152 aa4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 PIGYQ3MUY2 71 aa4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 MRPL51Q4U2R6 128 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 ZNF542PQ5EBM4 170 aa4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 UNQ9165/PRO28630Q6UXU0 137 aa4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 DEFB124Q8NES8 71 aa4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 SPATA3Q8NHX4 192 aa4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 LINC00474Q9P2X8 69 aa4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 ICOSQ9Y6W8 199 aa4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 CFAP54Q96N23 3096 aa4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 WDFY4Q6ZS81 3184 aa4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 MAP1BP46821 2468 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 PCDH15Q96QU1 1955 aa4.43□□□□□ -1.7
ECHDC1-215ENST00000475319 IGHV1OR15-9A0A0B4J2B8 117 aa4.42□□□□□ -1.7
ECHDC1-215ENST00000475319 COX7A2P2O60397 106 aa4.42□□□□□ -1.7
ECHDC1-215ENST00000475319 ESRGQ1W209 222 aa4.42□□□□□ -1.7
ECHDC1-215ENST00000475319 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-215ENST00000475319 RUSC1-AS1Q66K80 236 aa4.42□□□□□ -1.7
ECHDC1-215ENST00000475319 C16orf47Q6ZP98 133 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-215ENST00000475319 ZNF826PQ6ZT77 177 aa4.42□□□□□ -1.7
ECHDC1-215ENST00000475319 PHF5AQ7RTV0 110 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-215ENST00000475319 WFDC5Q8TCV5 224 aa4.42□□□□□ -1.7
ECHDC1-215ENST00000475319 DYNLRB2Q8TF09 96 aa4.42□□□□□ -1.7
ECHDC1-215ENST00000475319 LYZL4Q96KX0 146 aa4.42□□□□□ -1.7
ECHDC1-215ENST00000475319 CCL26Q9Y258 94 aa4.42□□□□□ -1.7
ECHDC1-215ENST00000475319 IGLV3-32A0A0A0MS00 114 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 J3QT63 122 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 ZNF73O43830 326 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 IGHV3-13P01766 116 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 B3GALT5-AS1P59052 145 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 LAGE3Q14657 143 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 KIF26BQ2KJY2 2108 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 Q86TA4 180 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 FAM216BQ8N7L0 139 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 FAM167A-AS1Q96KT0 104 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 RAI1Q7Z5J4 1906 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 CHD8Q9HCK8 2581 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 ATRXP46100 2492 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 THADAQ6YHU6 1953 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 IGLV5-52A0A0A0MRZ9 124 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 DNAL4O96015 105 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 CD59P13987 128 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 EIF4EBP1Q13541 118 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 Q1T7F1 81 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 LINC00322Q6ZN03 302 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 ZNF524Q96C55 264 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 TIMM17AQ99595 171 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 LINC00588Q9Y4M8 146 aa4.41□□□□□ -1.7
ECHDC1-215ENST00000475319 ATG2BQ96BY7 2078 aa4.4□□□□□ -1.7
ECHDC1-215ENST00000475319 A0A0J9YX75 114 aa4.4□□□□□ -1.71
ECHDC1-215ENST00000475319 C4orf51C9J302 202 aa4.4□□□□□ -1.71
ECHDC1-215ENST00000475319 TMEM256-PLSCR3K7ERE1 68 aa4.4□□□□□ -1.71
ECHDC1-215ENST00000475319 PRSS2P07478 247 aa4.4□□□□□ -1.71
ECHDC1-215ENST00000475319 FXYD7P58549 80 aa4.4□□□□□ -1.71
ECHDC1-215ENST00000475319 BLCAPP62952 87 aa4.4□□□□□ -1.71
ECHDC1-215ENST00000475319 Q0VFX4 171 aa4.4□□□□□ -1.71
ECHDC1-215ENST00000475319 LCA10Q71F78 164 aa4.4□□□□□ -1.71
ECHDC1-215ENST00000475319 VMO1Q7Z5L0 202 aa4.4□□□□□ -1.71
ECHDC1-215ENST00000475319 TDRD6O60522 2096 aaKnown RBP4.4□□□□□ -1.71
ECHDC1-215ENST00000475319 ARID1AO14497 2285 aa4.4□□□□□ -1.71
ECHDC1-215ENST00000475319 IGKV1-12A0A0C4DH73 117 aa4.39□□□□□ -1.71
ECHDC1-215ENST00000475319 SDHAF1A6NFY7 115 aa4.39□□□□□ -1.71
ECHDC1-215ENST00000475319 IGKV1D-12P01611 117 aa4.39□□□□□ -1.71
ECHDC1-215ENST00000475319 CIRBPQ14011 172 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-215ENST00000475319 ZNF876PQ49A33 203 aa4.39□□□□□ -1.71
ECHDC1-215ENST00000475319 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-215ENST00000475319 PCNX3Q9H6A9 2034 aa4.39□□□□□ -1.71
ECHDC1-215ENST00000475319 EML5Q05BV3 1969 aa4.38□□□□□ -1.71
ECHDC1-215ENST00000475319 USP34Q70CQ2 3546 aa4.38□□□□□ -1.71
ECHDC1-215ENST00000475319 CEP295Q9C0D2 2601 aa4.38□□□□□ -1.71
ECHDC1-215ENST00000475319 KMT2BQ9UMN6 2715 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-215ENST00000475319 IGKV1-27A0A075B6S5 117 aa4.38□□□□□ -1.71
ECHDC1-215ENST00000475319 IGHV3OR16-10A0A075B7F0 116 aa4.38□□□□□ -1.71
ECHDC1-215ENST00000475319 F8WEM9 126 aa4.38□□□□□ -1.71
ECHDC1-215ENST00000475319 DEFB119Q8N690 84 aa4.38□□□□□ -1.71
ECHDC1-215ENST00000475319 TOMM6Q96B49 74 aa4.38□□□□□ -1.71
ECHDC1-215ENST00000475319 FXYD5Q96DB9 178 aa4.38□□□□□ -1.71
ECHDC1-215ENST00000475319 OVOL2Q9BRP0 275 aa4.38□□□□□ -1.71
ECHDC1-215ENST00000475319 CXXC4Q9H2H0 198 aa4.38□□□□□ -1.71
ECHDC1-215ENST00000475319 CTSZQ9UBR2 303 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms