RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 CACNG7P62955 275 aa10.96□□□□□ -0.65
COL1A1-204ENST00000474644 FAM74A4Q5TZK3 123 aa10.96□□□□□ -0.65
COL1A1-204ENST00000474644 LGALS9CQ6DKI2 356 aa10.96□□□□□ -0.65
COL1A1-204ENST00000474644 A0A096LPF7 62 aa10.95□□□□□ -0.66
COL1A1-204ENST00000474644 LY6G6CO95867 125 aa10.95□□□□□ -0.66
COL1A1-204ENST00000474644 ADCYAP1P18509 176 aa10.95□□□□□ -0.66
COL1A1-204ENST00000474644 Q6ZSN1 163 aa10.95□□□□□ -0.66
COL1A1-204ENST00000474644 OR10G8Q8NGN5 311 aa10.95□□□□□ -0.66
COL1A1-204ENST00000474644 TSKUQ8WUA8 353 aa10.95□□□□□ -0.66
COL1A1-204ENST00000474644 AP1S3Q96PC3 154 aa10.95□□□□□ -0.66
COL1A1-204ENST00000474644 CNFNQ9BYD5 112 aa10.95□□□□□ -0.66
COL1A1-204ENST00000474644 NACAE9PAV3 2078 aa10.95□□□□□ -0.66
COL1A1-204ENST00000474644 TRBV6-4A0A1B0GX49 114 aa10.94□□□□□ -0.66
COL1A1-204ENST00000474644 TMEM218A2RU14 115 aa10.94□□□□□ -0.66
COL1A1-204ENST00000474644 P0DMU3 169 aa10.94□□□□□ -0.66
COL1A1-204ENST00000474644 FAM231AP0DMU4 169 aa10.94□□□□□ -0.66
COL1A1-204ENST00000474644 FAM231CP0DMU5 169 aa10.94□□□□□ -0.66
COL1A1-204ENST00000474644 SLC25A29Q8N8R3 303 aa10.94□□□□□ -0.66
COL1A1-204ENST00000474644 MSRB1Q9NZV6 116 aa10.94□□□□□ -0.66
COL1A1-204ENST00000474644 ICOSQ9Y6W8 199 aa10.94□□□□□ -0.66
COL1A1-204ENST00000474644 LOC100131303A0A0U1RQF7 123 aa10.93□□□□□ -0.66
COL1A1-204ENST00000474644 K7EQD1 137 aa10.93□□□□□ -0.66
COL1A1-204ENST00000474644 GYPEP15421 78 aa10.93□□□□□ -0.66
COL1A1-204ENST00000474644 PNRC1Q12796 327 aaPredicted RBP10.93□□□□□ -0.66
COL1A1-204ENST00000474644 RHOHQ15669 191 aa10.93□□□□□ -0.66
COL1A1-204ENST00000474644 WDR73Q6P4I2 378 aa10.93□□□□□ -0.66
COL1A1-204ENST00000474644 GFRA4Q9GZZ7 299 aa10.93□□□□□ -0.66
COL1A1-204ENST00000474644 FAM231BA6NCW3 169 aa10.92□□□□□ -0.66
COL1A1-204ENST00000474644 NTF3P20783 257 aa10.92□□□□□ -0.66
COL1A1-204ENST00000474644 FOXA3P55318 350 aaPredicted RBP10.92□□□□□ -0.66
COL1A1-204ENST00000474644 C14orf178Q8N769 122 aaPredicted RBP10.92□□□□□ -0.66
COL1A1-204ENST00000474644 PGLYRP4Q96LB8 373 aa10.92□□□□□ -0.66
COL1A1-204ENST00000474644 PRADC1Q9BSG0 188 aa10.92□□□□□ -0.66
COL1A1-204ENST00000474644 KIF25-AS1Q9Y6Z4 181 aa10.92□□□□□ -0.66
COL1A1-204ENST00000474644 VPS13DQ5THJ4 4388 aa10.91□□□□□ -0.66
COL1A1-204ENST00000474644 HIGD1CA8MV81 97 aa10.91□□□□□ -0.66
COL1A1-204ENST00000474644 F8W036 122 aa10.91□□□□□ -0.66
COL1A1-204ENST00000474644 SRIP30626 198 aa10.91□□□□□ -0.66
COL1A1-204ENST00000474644 TWIST1Q15672 202 aa10.91□□□□□ -0.66
COL1A1-204ENST00000474644 ZNF56Q15929 161 aa10.91□□□□□ -0.66
COL1A1-204ENST00000474644 MRPL23Q16540 153 aaKnown RBP10.91□□□□□ -0.66
COL1A1-204ENST00000474644 UBE2DNLQ8IWF7 75 aa10.91□□□□□ -0.66
COL1A1-204ENST00000474644 TRGC1P0CF51 173 aa10.9□□□□□ -0.66
COL1A1-204ENST00000474644 SMIM17P0DL12 118 aa10.9□□□□□ -0.66
COL1A1-204ENST00000474644 LINC00315P59091 139 aa10.9□□□□□ -0.66
COL1A1-204ENST00000474644 RNF212Q495C1 297 aa10.9□□□□□ -0.66
COL1A1-204ENST00000474644 SEC11CQ9BY50 192 aa10.9□□□□□ -0.66
COL1A1-204ENST00000474644 EVI2AP22794 236 aa10.89□□□□□ -0.67
COL1A1-204ENST00000474644 CCL18P55774 89 aa10.89□□□□□ -0.67
COL1A1-204ENST00000474644 RAB4BP61018 213 aa10.89□□□□□ -0.67
COL1A1-204ENST00000474644 BORCS7Q96B45 105 aa10.89□□□□□ -0.67
COL1A1-204ENST00000474644 NAT8BQ9UHF3 227 aa10.89□□□□□ -0.67
COL1A1-204ENST00000474644 LINC00588Q9Y4M8 146 aa10.89□□□□□ -0.67
COL1A1-204ENST00000474644 A0A1B0GUT8 65 aa10.88□□□□□ -0.67
COL1A1-204ENST00000474644 SMIM27A0A1W2PRY6 76 aa10.88□□□□□ -0.67
COL1A1-204ENST00000474644 MGPP08493 103 aa10.88□□□□□ -0.67
COL1A1-204ENST00000474644 LINC00694P0DN24 101 aa10.88□□□□□ -0.67
COL1A1-204ENST00000474644 ESRGQ1W209 222 aa10.88□□□□□ -0.67
COL1A1-204ENST00000474644 NEGR1Q7Z3B1 354 aa10.88□□□□□ -0.67
COL1A1-204ENST00000474644 NUP35Q8NFH5 326 aa10.88□□□□□ -0.67
COL1A1-204ENST00000474644 Q9UF83 564 aa10.88□□□□□ -0.67
COL1A1-204ENST00000474644 HYDINQ4G0P3 5121 aa10.87□□□□□ -0.67
COL1A1-204ENST00000474644 GAGE12JA6NER3 117 aa10.87□□□□□ -0.67
COL1A1-204ENST00000474644 PPP1R2P9O14990 202 aa10.87□□□□□ -0.67
COL1A1-204ENST00000474644 GAGE1Q13065 139 aa10.87□□□□□ -0.67
COL1A1-204ENST00000474644 GAGE4Q13068 117 aa10.87□□□□□ -0.67
COL1A1-204ENST00000474644 GAGE5Q13069 117 aa10.87□□□□□ -0.67
COL1A1-204ENST00000474644 GAGE13Q4V321 117 aa10.87□□□□□ -0.67
COL1A1-204ENST00000474644 DPH3P1Q9H4G8 78 aa10.87□□□□□ -0.67
COL1A1-204ENST00000474644 F5H697 171 aa10.86□□□□□ -0.67
COL1A1-204ENST00000474644 MT-ND4LP03901 98 aa10.86□□□□□ -0.67
COL1A1-204ENST00000474644 FAM3BP58499 235 aaPredicted RBP10.86□□□□□ -0.67
COL1A1-204ENST00000474644 C10orf91Q5T1B1 145 aa10.86□□□□□ -0.67
COL1A1-204ENST00000474644 SH2D6Q7Z4S9 175 aa10.86□□□□□ -0.67
COL1A1-204ENST00000474644 MRPS16Q9Y3D3 137 aaKnown RBP10.86□□□□□ -0.67
COL1A1-204ENST00000474644 EPPK1P58107 5090 aaKnown RBP10.86□□□□□ -0.67
COL1A1-204ENST00000474644 TRBV10-1A0A0K0K1A3 114 aa10.85□□□□□ -0.67
COL1A1-204ENST00000474644 SUMO4Q6EEV6 95 aa10.85□□□□□ -0.67
COL1A1-204ENST00000474644 LYPD5Q6UWN5 251 aa10.85□□□□□ -0.67
COL1A1-204ENST00000474644 ANAPC16Q96DE5 110 aa10.85□□□□□ -0.67
COL1A1-204ENST00000474644 CARHSP1Q9Y2V2 147 aaKnown RBP10.85□□□□□ -0.67
COL1A1-204ENST00000474644 SMIM15Q7Z3B0 74 aa10.84□□□□□ -0.67
COL1A1-204ENST00000474644 ZNRF2Q8NHG8 242 aa10.84□□□□□ -0.67
COL1A1-204ENST00000474644 UPK3BQ9BT76 320 aa10.84□□□□□ -0.67
COL1A1-204ENST00000474644 RIGQ13278 110 aa10.83□□□□□ -0.68
COL1A1-204ENST00000474644 ATP6V0E2Q8NHE4 81 aa10.83□□□□□ -0.68
COL1A1-204ENST00000474644 M0QY20 66 aa10.82□□□□□ -0.68
COL1A1-204ENST00000474644 TIRAPP58753 221 aa10.82□□□□□ -0.68
COL1A1-204ENST00000474644 RPL36AP83881 106 aaKnown RBP10.82□□□□□ -0.68
COL1A1-204ENST00000474644 NEXN-AS1Q8NBZ9 246 aa10.82□□□□□ -0.68
COL1A1-204ENST00000474644 RPL36ALQ969Q0 106 aaKnown RBP10.82□□□□□ -0.68
COL1A1-204ENST00000474644 TMEM191AQ9H0A3 160 aa10.82□□□□□ -0.68
COL1A1-204ENST00000474644 TRBV7-3A0A075B6L6 115 aa10.81□□□□□ -0.68
COL1A1-204ENST00000474644 H7C1H1 209 aa10.81□□□□□ -0.68
COL1A1-204ENST00000474644 UBE2D3P61077 147 aa10.81□□□□□ -0.68
COL1A1-204ENST00000474644 UBE2D2P62837 147 aa10.81□□□□□ -0.68
COL1A1-204ENST00000474644 KMT2AQ03164 3969 aa10.81□□□□□ -0.68
COL1A1-204ENST00000474644 DNAH6Q9C0G6 4158 aa10.8□□□□□ -0.68
COL1A1-204ENST00000474644 IGLV2-18A0A075B6J9 118 aa10.8□□□□□ -0.68
COL1A1-204ENST00000474644 TRAV26-2A0A0B4J265 109 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms