RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 SLC25A29Q8N8R3 303 aa12.44□□□□□ -0.42
SNX4-204ENST00000473417 OR10AG1Q8NH19 301 aa12.44□□□□□ -0.42
SNX4-204ENST00000473417 SMIM7Q9BQ49 75 aa12.44□□□□□ -0.42
SNX4-204ENST00000473417 SSBP4Q9BWG4 385 aaPredicted RBP12.44□□□□□ -0.42
SNX4-204ENST00000473417 RNASE7Q9H1E1 156 aaKnown RBP12.44□□□□□ -0.42
SNX4-204ENST00000473417 ZNF727A8MUV8 499 aa12.43□□□□□ -0.42
SNX4-204ENST00000473417 C9JQL5 133 aa12.43□□□□□ -0.42
SNX4-204ENST00000473417 OR5AL1P0C617 328 aa12.43□□□□□ -0.42
SNX4-204ENST00000473417 TNP2Q05952 138 aa12.43□□□□□ -0.42
SNX4-204ENST00000473417 PEA15Q15121 130 aa12.43□□□□□ -0.42
SNX4-204ENST00000473417 FAM74A4Q5TZK3 123 aa12.43□□□□□ -0.42
SNX4-204ENST00000473417 SFRP2Q96HF1 295 aa12.43□□□□□ -0.42
SNX4-204ENST00000473417 UPK3BQ9BT76 320 aa12.43□□□□□ -0.42
SNX4-204ENST00000473417 TPPP3Q9BW30 176 aa12.43□□□□□ -0.42
SNX4-204ENST00000473417 A0A087WWL8 130 aa12.42□□□□□ -0.42
SNX4-204ENST00000473417 SRIP30626 198 aa12.42□□□□□ -0.42
SNX4-204ENST00000473417 SPANXN1Q5VSR9 72 aa12.42□□□□□ -0.42
SNX4-204ENST00000473417 ZFP2Q6ZN57 461 aa12.42□□□□□ -0.42
SNX4-204ENST00000473417 Q6ZSN1 163 aa12.42□□□□□ -0.42
SNX4-204ENST00000473417 NEGR1Q7Z3B1 354 aa12.42□□□□□ -0.42
SNX4-204ENST00000473417 FER1L6-AS1Q8NA97 138 aa12.42□□□□□ -0.42
SNX4-204ENST00000473417 Q9H8V8 135 aa12.42□□□□□ -0.42
SNX4-204ENST00000473417 TRBV6-4A0A1B0GX49 114 aa12.41□□□□□ -0.42
SNX4-204ENST00000473417 XKRY2A2RUG3 117 aa12.41□□□□□ -0.42
SNX4-204ENST00000473417 RYR1P21817 5038 aa12.41□□□□□ -0.42
SNX4-204ENST00000473417 RAB14P61106 215 aa12.41□□□□□ -0.42
SNX4-204ENST00000473417 UFSP1Q6NVU6 142 aa12.41□□□□□ -0.42
SNX4-204ENST00000473417 PRADC1Q9BSG0 188 aa12.41□□□□□ -0.42
SNX4-204ENST00000473417 RPP21Q9H633 154 aaKnown RBP12.41□□□□□ -0.42
SNX4-204ENST00000473417 NXPH4O95158 308 aa12.4□□□□□ -0.42
SNX4-204ENST00000473417 CRYGDP07320 174 aa12.4□□□□□ -0.42
SNX4-204ENST00000473417 IGLC6P0CF74 106 aa12.4□□□□□ -0.42
SNX4-204ENST00000473417 RHOHQ15669 191 aa12.4□□□□□ -0.42
SNX4-204ENST00000473417 TTC32Q5I0X7 151 aa12.4□□□□□ -0.42
SNX4-204ENST00000473417 KRTAP1-5Q9BYS1 174 aa12.4□□□□□ -0.42
SNX4-204ENST00000473417 MRPS16Q9Y3D3 137 aaKnown RBP12.4□□□□□ -0.42
SNX4-204ENST00000473417 LY96Q9Y6Y9 160 aa12.4□□□□□ -0.42
SNX4-204ENST00000473417 RHODO00212 210 aa12.39□□□□□ -0.43
SNX4-204ENST00000473417 LYPD5Q6UWN5 251 aa12.39□□□□□ -0.43
SNX4-204ENST00000473417 LINC01551Q86U37 167 aa12.39□□□□□ -0.43
SNX4-204ENST00000473417 GATCO43716 136 aaKnown RBP12.38□□□□□ -0.43
SNX4-204ENST00000473417 ERVFC1-1P60608 527 aa12.38□□□□□ -0.43
SNX4-204ENST00000473417 IFITM2Q01629 132 aa12.38□□□□□ -0.43
SNX4-204ENST00000473417 SMDT1Q9H4I9 107 aa12.38□□□□□ -0.43
SNX4-204ENST00000473417 LYZL1Q6UWQ5 148 aa12.37□□□□□ -0.43
SNX4-204ENST00000473417 FAM231DQ6ZW35 169 aa12.37□□□□□ -0.43
SNX4-204ENST00000473417 C14orf178Q8N769 122 aaPredicted RBP12.37□□□□□ -0.43
SNX4-204ENST00000473417 A0A1W2PPQ1 181 aa12.36□□□□□ -0.43
SNX4-204ENST00000473417 GAGE12JA6NER3 117 aa12.36□□□□□ -0.43
SNX4-204ENST00000473417 GAGE1Q13065 139 aa12.36□□□□□ -0.43
SNX4-204ENST00000473417 GAGE4Q13068 117 aa12.36□□□□□ -0.43
SNX4-204ENST00000473417 GAGE5Q13069 117 aa12.36□□□□□ -0.43
SNX4-204ENST00000473417 TMEM241Q24JQ0 296 aa12.36□□□□□ -0.43
SNX4-204ENST00000473417 GAGE13Q4V321 117 aa12.36□□□□□ -0.43
SNX4-204ENST00000473417 FAM74A3Q4VXF1 159 aa12.36□□□□□ -0.43
SNX4-204ENST00000473417 MSRB1Q9NZV6 116 aa12.36□□□□□ -0.43
SNX4-204ENST00000473417 Q9UF83 564 aa12.36□□□□□ -0.43
SNX4-204ENST00000473417 LRP1BQ9NZR2 4599 aa12.35□□□□□ -0.43
SNX4-204ENST00000473417 F2Z2F3 143 aa12.35□□□□□ -0.43
SNX4-204ENST00000473417 CACNG7P62955 275 aa12.35□□□□□ -0.43
SNX4-204ENST00000473417 HSPG2P98160 4391 aa12.34□□□□□ -0.43
SNX4-204ENST00000473417 RPL23P62829 140 aaKnown RBP12.34□□□□□ -0.43
SNX4-204ENST00000473417 ZNF56Q15929 161 aa12.34□□□□□ -0.43
SNX4-204ENST00000473417 CLLU1Q5K131 121 aa12.34□□□□□ -0.43
SNX4-204ENST00000473417 SH2D6Q7Z4S9 175 aa12.34□□□□□ -0.43
SNX4-204ENST00000473417 GTSF1Q8WW33 167 aa12.34□□□□□ -0.43
SNX4-204ENST00000473417 AP1S3Q96PC3 154 aa12.34□□□□□ -0.43
SNX4-204ENST00000473417 NAT8Q9UHE5 227 aa12.34□□□□□ -0.43
SNX4-204ENST00000473417 SMIM17P0DL12 118 aa12.33□□□□□ -0.44
SNX4-204ENST00000473417 CTRLP40313 264 aa12.33□□□□□ -0.44
SNX4-204ENST00000473417 ADIRFQ15847 76 aa12.33□□□□□ -0.44
SNX4-204ENST00000473417 A8MWL6 223 aa12.32□□□□□ -0.44
SNX4-204ENST00000473417 C16orf90A8MZG2 172 aa12.32□□□□□ -0.44
SNX4-204ENST00000473417 F5H697 171 aa12.32□□□□□ -0.44
SNX4-204ENST00000473417 BTF3P20290 206 aaKnown RBP12.32□□□□□ -0.44
SNX4-204ENST00000473417 NTF3P20783 257 aa12.32□□□□□ -0.44
SNX4-204ENST00000473417 RAB4BP61018 213 aa12.32□□□□□ -0.44
SNX4-204ENST00000473417 ATP6V0E2Q8NHE4 81 aa12.32□□□□□ -0.44
SNX4-204ENST00000473417 ISOC2Q96AB3 205 aa12.32□□□□□ -0.44
SNX4-204ENST00000473417 OSTCQ9NRP0 149 aa12.32□□□□□ -0.44
SNX4-204ENST00000473417 KIF25-AS1Q9Y6Z4 181 aa12.32□□□□□ -0.44
SNX4-204ENST00000473417 ABCA13Q86UQ4 5058 aa12.31□□□□□ -0.44
SNX4-204ENST00000473417 C15orf54Q8N8G6 183 aa12.31□□□□□ -0.44
SNX4-204ENST00000473417 SIVA1O15304 175 aa12.3□□□□□ -0.44
SNX4-204ENST00000473417 MGPP08493 103 aa12.3□□□□□ -0.44
SNX4-204ENST00000473417 LINC00694P0DN24 101 aa12.3□□□□□ -0.44
SNX4-204ENST00000473417 EVI2AP22794 236 aa12.3□□□□□ -0.44
SNX4-204ENST00000473417 TWIST1Q15672 202 aa12.3□□□□□ -0.44
SNX4-204ENST00000473417 CT83Q5H943 113 aa12.3□□□□□ -0.44
SNX4-204ENST00000473417 WDR73Q6P4I2 378 aa12.3□□□□□ -0.44
SNX4-204ENST00000473417 PGLYRP4Q96LB8 373 aa12.3□□□□□ -0.44
SNX4-204ENST00000473417 DNAH5Q8TE73 4624 aa12.29□□□□□ -0.44
SNX4-204ENST00000473417 TRGC1P0CF51 173 aa12.29□□□□□ -0.44
SNX4-204ENST00000473417 LINC00315P59091 139 aa12.29□□□□□ -0.44
SNX4-204ENST00000473417 WFDC10BQ8IUB3 73 aa12.29□□□□□ -0.44
SNX4-204ENST00000473417 CNFNQ9BYD5 112 aa12.29□□□□□ -0.44
SNX4-204ENST00000473417 GTSF1LQ9H1H1 148 aa12.29□□□□□ -0.44
SNX4-204ENST00000473417 APOBP04114 4563 aaKnown RBP12.28□□□□□ -0.44
SNX4-204ENST00000473417 TRBV10-1A0A0K0K1A3 114 aa12.28□□□□□ -0.44
SNX4-204ENST00000473417 CDK2AP2O75956 126 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms