RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 INSL3P51460 131 aa15.82■□□□□ 0.12
COL18A1-207ENST00000473212 IGHG2P01859 326 aa15.81■□□□□ 0.12
COL18A1-207ENST00000473212 POM121L12Q8N7R1 296 aa15.81■□□□□ 0.12
COL18A1-207ENST00000473212 USMG5Q96IX5 58 aa15.81■□□□□ 0.12
COL18A1-207ENST00000473212 IGLV4-69A0A075B6H9 119 aa15.81■□□□□ 0.12
COL18A1-207ENST00000473212 LINC01549A6NIU2 74 aa15.81■□□□□ 0.12
COL18A1-207ENST00000473212 SFTA2Q6UW10 78 aa15.81■□□□□ 0.12
COL18A1-207ENST00000473212 A0A087WWL8 130 aa15.8■□□□□ 0.12
COL18A1-207ENST00000473212 RPL39P62891 51 aaKnown RBP15.8■□□□□ 0.12
COL18A1-207ENST00000473212 NXPH4O95158 308 aa15.79■□□□□ 0.12
COL18A1-207ENST00000473212 ZFP2Q6ZN57 461 aa15.79■□□□□ 0.12
COL18A1-207ENST00000473212 SUMO4Q6EEV6 95 aa15.79■□□□□ 0.12
COL18A1-207ENST00000473212 TMEM238LA0A1B0GVL6 79 aa15.78■□□□□ 0.12
COL18A1-207ENST00000473212 A6NDX4 124 aa15.78■□□□□ 0.12
COL18A1-207ENST00000473212 IGIPA6NJ69 53 aa15.78■□□□□ 0.12
COL18A1-207ENST00000473212 A6NJY4 79 aa15.78■□□□□ 0.12
COL18A1-207ENST00000473212 FAM159AQ6UWV7 190 aa15.78■□□□□ 0.12
COL18A1-207ENST00000473212 IGHV4OR15-8A0A075B7B6 117 aa15.78■□□□□ 0.12
COL18A1-207ENST00000473212 A0A087WW49 117 aa15.78■□□□□ 0.12
COL18A1-207ENST00000473212 NRGNQ92686 78 aa15.78■□□□□ 0.12
COL18A1-207ENST00000473212 TRBV7-9A0A0J9YWB2 115 aa15.77■□□□□ 0.12
COL18A1-207ENST00000473212 F5H697 171 aa15.77■□□□□ 0.12
COL18A1-207ENST00000473212 UBE2D1P51668 147 aa15.77■□□□□ 0.12
COL18A1-207ENST00000473212 POLR2KP53803 58 aaKnown RBP15.77■□□□□ 0.12
COL18A1-207ENST00000473212 KLLNB2CW77 178 aa15.77■□□□□ 0.12
COL18A1-207ENST00000473212 IGKV3-20P01619 116 aa15.77■□□□□ 0.12
COL18A1-207ENST00000473212 C10orf105Q8TEF2 133 aa15.77■□□□□ 0.12
COL18A1-207ENST00000473212 PIMREGQ9BSJ6 248 aa15.77■□□□□ 0.12
COL18A1-207ENST00000473212 MYO18BQ8IUG5 2567 aa15.77■□□□□ 0.11
COL18A1-207ENST00000473212 APOMO95445 188 aa15.76■□□□□ 0.11
COL18A1-207ENST00000473212 PMVKQ15126 192 aa15.76■□□□□ 0.11
COL18A1-207ENST00000473212 SPATA25Q9BR10 227 aa15.76■□□□□ 0.11
COL18A1-207ENST00000473212 DAZ1Q9NQZ3 744 aaKnown RBP15.76■□□□□ 0.11
COL18A1-207ENST00000473212 LOC107984156A0A0G2JMH3 177 aa15.76■□□□□ 0.11
COL18A1-207ENST00000473212 H3BUA1 57 aa15.76■□□□□ 0.11
COL18A1-207ENST00000473212 TSPAN13O95857 204 aa15.76■□□□□ 0.11
COL18A1-207ENST00000473212 CD7P09564 240 aa15.76■□□□□ 0.11
COL18A1-207ENST00000473212 ARL17AQ8IVW1 177 aa15.76■□□□□ 0.11
COL18A1-207ENST00000473212 CCL19Q99731 98 aa15.76■□□□□ 0.11
COL18A1-207ENST00000473212 TRAV12-3A0A0B4J271 114 aa15.75■□□□□ 0.11
COL18A1-207ENST00000473212 KIR2DL4Q99706 377 aa15.75■□□□□ 0.11
COL18A1-207ENST00000473212 MXRA5Q9NR99 2828 aa15.75■□□□□ 0.11
COL18A1-207ENST00000473212 HERVK_113P61574 105 aa15.75■□□□□ 0.11
COL18A1-207ENST00000473212 RPL32P62910 135 aaKnown RBP15.75■□□□□ 0.11
COL18A1-207ENST00000473212 DLX4Q92988 240 aaPredicted RBP15.75■□□□□ 0.11
COL18A1-207ENST00000473212 IGSF10Q6WRI0 2623 aa15.75■□□□□ 0.11
COL18A1-207ENST00000473212 DOPEY1Q5JWR5 2465 aa15.75■□□□□ 0.11
COL18A1-207ENST00000473212 A0A0J9YY99 117 aa15.74■□□□□ 0.11
COL18A1-207ENST00000473212 VCYO14598 125 aa15.74■□□□□ 0.11
COL18A1-207ENST00000473212 PSMB2P49721 201 aa15.74■□□□□ 0.11
COL18A1-207ENST00000473212 TRAV12-2A0A075B6T6 113 aa15.74■□□□□ 0.11
COL18A1-207ENST00000473212 SDHAF1A6NFY7 115 aa15.74■□□□□ 0.11
COL18A1-207ENST00000473212 NDUFS8O00217 210 aa15.74■□□□□ 0.11
COL18A1-207ENST00000473212 ATP5J2P56134 94 aa15.74■□□□□ 0.11
COL18A1-207ENST00000473212 TSPEAR-AS2P59090 65 aa15.74■□□□□ 0.11
COL18A1-207ENST00000473212 IGLV1-40P01703 118 aa15.73■□□□□ 0.11
COL18A1-207ENST00000473212 SMCPP49901 116 aaPredicted RBP15.73■□□□□ 0.11
COL18A1-207ENST00000473212 PAPPA-AS1Q5QFB9 102 aa15.73■□□□□ 0.11
COL18A1-207ENST00000473212 TMEM170BQ5T4T1 132 aa15.73■□□□□ 0.11
COL18A1-207ENST00000473212 FAM74A4Q5TZK3 123 aa15.73■□□□□ 0.11
COL18A1-207ENST00000473212 CACNA1AO00555 2505 aa15.73■□□□□ 0.11
COL18A1-207ENST00000473212 BRI3O95415 125 aa15.73■□□□□ 0.11
COL18A1-207ENST00000473212 CFAP126Q5VTH2 177 aa15.73■□□□□ 0.11
COL18A1-207ENST00000473212 SCGB1A1P11684 91 aa15.72■□□□□ 0.11
COL18A1-207ENST00000473212 TMEM141Q96I45 108 aa15.72■□□□□ 0.11
COL18A1-207ENST00000473212 ZNF688P0C7X2 276 aa15.72■□□□□ 0.11
COL18A1-207ENST00000473212 CLEC2AQ6UVW9 174 aa15.72■□□□□ 0.11
COL18A1-207ENST00000473212 ZNRF2Q8NHG8 242 aa15.72■□□□□ 0.11
COL18A1-207ENST00000473212 DCANP1Q8TF63 244 aa15.71■□□□□ 0.11
COL18A1-207ENST00000473212 FBN2P35556 2912 aa15.71■□□□□ 0.11
COL18A1-207ENST00000473212 ID1P41134 155 aa15.71■□□□□ 0.11
COL18A1-207ENST00000473212 NDUFA11Q86Y39 141 aa15.71■□□□□ 0.11
COL18A1-207ENST00000473212 TIMM17AQ99595 171 aa15.71■□□□□ 0.11
COL18A1-207ENST00000473212 PRORYQ9H606 182 aa15.71■□□□□ 0.11
COL18A1-207ENST00000473212 ZNF256Q9Y2P7 627 aaPredicted RBP15.71■□□□□ 0.11
COL18A1-207ENST00000473212 ZNF418Q8TF45 676 aaPredicted RBP15.7■□□□□ 0.1
COL18A1-207ENST00000473212 MSMBP08118 114 aa15.69■□□□□ 0.1
COL18A1-207ENST00000473212 CFHR3Q02985 330 aa15.69■□□□□ 0.1
COL18A1-207ENST00000473212 FOXI1Q12951 378 aa15.69■□□□□ 0.1
COL18A1-207ENST00000473212 C1QTNF4Q9BXJ3 329 aa15.69■□□□□ 0.1
COL18A1-207ENST00000473212 MDFICQ9P1T7 246 aa15.69■□□□□ 0.1
COL18A1-207ENST00000473212 ZFYVE26Q68DK2 2539 aa15.69■□□□□ 0.1
COL18A1-207ENST00000473212 IGHV4-59P01825 116 aa15.69■□□□□ 0.1
COL18A1-207ENST00000473212 UBE2D3P61077 147 aa15.69■□□□□ 0.1
COL18A1-207ENST00000473212 UBE2D2P62837 147 aa15.69■□□□□ 0.1
COL18A1-207ENST00000473212 ACACBO00763 2458 aa15.69■□□□□ 0.1
COL18A1-207ENST00000473212 TRBV27A0A0K0K1C4 114 aa15.68■□□□□ 0.1
COL18A1-207ENST00000473212 ZNF876PQ49A33 203 aa15.68■□□□□ 0.1
COL18A1-207ENST00000473212 MAPK1IP1LQ8NDC0 245 aa15.68■□□□□ 0.1
COL18A1-207ENST00000473212 OPRPNQ99935 248 aaPredicted RBP15.68■□□□□ 0.1
COL18A1-207ENST00000473212 FAM208BQ5VWN6 2430 aa15.68■□□□□ 0.1
COL18A1-207ENST00000473212 LGALS9O00182 355 aa15.68■□□□□ 0.1
COL18A1-207ENST00000473212 IGHV3-30P01768 117 aa15.68■□□□□ 0.1
COL18A1-207ENST00000473212 IGHV3-30-5P0DP03 117 aa15.68■□□□□ 0.1
COL18A1-207ENST00000473212 DUX5Q96PT3 197 aa15.68■□□□□ 0.1
COL18A1-207ENST00000473212 ANKRD17O75179 2603 aaKnown RBP15.67■□□□□ 0.1
COL18A1-207ENST00000473212 CFC1BP0CG36 223 aa15.67■□□□□ 0.1
COL18A1-207ENST00000473212 CFC1P0CG37 223 aa15.67■□□□□ 0.1
COL18A1-207ENST00000473212 NFE4Q86UQ8 179 aa15.67■□□□□ 0.1
COL18A1-207ENST00000473212 ZNF56Q15929 161 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms