RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 SLC25A29Q8N8R3 303 aa14.43□□□□□ -0.1
TOP3A-204ENST00000472959 PRADC1Q9BSG0 188 aa14.43□□□□□ -0.1
TOP3A-204ENST00000472959 LYSTQ99698 3801 aa14.43□□□□□ -0.1
TOP3A-204ENST00000472959 MUC21A0A0G2JKD1 596 aa14.42□□□□□ -0.1
TOP3A-204ENST00000472959 MUC21A0A140T8X8 626 aa14.42□□□□□ -0.1
TOP3A-204ENST00000472959 K7EQD1 137 aa14.42□□□□□ -0.1
TOP3A-204ENST00000472959 CTRLP40313 264 aa14.42□□□□□ -0.1
TOP3A-204ENST00000472959 RHOHQ15669 191 aa14.42□□□□□ -0.1
TOP3A-204ENST00000472959 FAM74A4Q5TZK3 123 aa14.42□□□□□ -0.1
TOP3A-204ENST00000472959 LYZL1Q6UWQ5 148 aa14.42□□□□□ -0.1
TOP3A-204ENST00000472959 ISOC2Q96AB3 205 aa14.42□□□□□ -0.1
TOP3A-204ENST00000472959 RYR3Q15413 4870 aa14.41□□□□□ -0.1
TOP3A-204ENST00000472959 A0A087WWL8 130 aa14.41□□□□□ -0.1
TOP3A-204ENST00000472959 SRIP30626 198 aa14.41□□□□□ -0.1
TOP3A-204ENST00000472959 ADIRFQ15847 76 aa14.41□□□□□ -0.1
TOP3A-204ENST00000472959 SH2D6Q7Z4S9 175 aa14.41□□□□□ -0.1
TOP3A-204ENST00000472959 SSTP61278 116 aa14.4□□□□□ -0.1
TOP3A-204ENST00000472959 UQCC3Q6UW78 93 aa14.4□□□□□ -0.1
TOP3A-204ENST00000472959 Q6ZSN1 163 aa14.4□□□□□ -0.1
TOP3A-204ENST00000472959 NEGR1Q7Z3B1 354 aa14.4□□□□□ -0.1
TOP3A-204ENST00000472959 AP1S3Q96PC3 154 aa14.4□□□□□ -0.1
TOP3A-204ENST00000472959 CNFNQ9BYD5 112 aa14.4□□□□□ -0.1
TOP3A-204ENST00000472959 ESRGQ1W209 222 aa14.39□□□□□ -0.11
TOP3A-204ENST00000472959 GTSF1Q8WW33 167 aa14.39□□□□□ -0.11
TOP3A-204ENST00000472959 LINC00588Q9Y4M8 146 aa14.39□□□□□ -0.11
TOP3A-204ENST00000472959 FAM231BA6NCW3 169 aa14.38□□□□□ -0.11
TOP3A-204ENST00000472959 SMIM17P0DL12 118 aa14.38□□□□□ -0.11
TOP3A-204ENST00000472959 FOXA3P55318 350 aaPredicted RBP14.38□□□□□ -0.11
TOP3A-204ENST00000472959 TSKUQ8WUA8 353 aa14.38□□□□□ -0.11
TOP3A-204ENST00000472959 GFRA4Q9GZZ7 299 aa14.38□□□□□ -0.11
TOP3A-204ENST00000472959 VPS13DQ5THJ4 4388 aa14.37□□□□□ -0.11
TOP3A-204ENST00000472959 NACAE9PAV3 2078 aa14.37□□□□□ -0.11
TOP3A-204ENST00000472959 LOC100131303A0A0U1RQF7 123 aa14.37□□□□□ -0.11
TOP3A-204ENST00000472959 RAB4BP61018 213 aa14.37□□□□□ -0.11
TOP3A-204ENST00000472959 C14orf178Q8N769 122 aaPredicted RBP14.37□□□□□ -0.11
TOP3A-204ENST00000472959 OR10G8Q8NGN5 311 aa14.37□□□□□ -0.11
TOP3A-204ENST00000472959 V9GYV3 84 aa14.37□□□□□ -0.11
TOP3A-204ENST00000472959 TRGC1P0CF51 173 aa14.36□□□□□ -0.11
TOP3A-204ENST00000472959 NTF3P20783 257 aa14.36□□□□□ -0.11
TOP3A-204ENST00000472959 MSRB1Q9NZV6 116 aa14.36□□□□□ -0.11
TOP3A-204ENST00000472959 MRPS16Q9Y3D3 137 aaKnown RBP14.36□□□□□ -0.11
TOP3A-204ENST00000472959 LYPD5Q6UWN5 251 aa14.35□□□□□ -0.11
TOP3A-204ENST00000472959 UPK3BQ9BT76 320 aa14.35□□□□□ -0.11
TOP3A-204ENST00000472959 KIF25-AS1Q9Y6Z4 181 aa14.35□□□□□ -0.11
TOP3A-204ENST00000472959 TRBV10-1A0A0K0K1A3 114 aa14.34□□□□□ -0.11
TOP3A-204ENST00000472959 PNRC1Q12796 327 aaPredicted RBP14.34□□□□□ -0.11
TOP3A-204ENST00000472959 TWIST1Q15672 202 aa14.34□□□□□ -0.11
TOP3A-204ENST00000472959 ZNF56Q15929 161 aa14.34□□□□□ -0.11
TOP3A-204ENST00000472959 ZNRF2Q8NHG8 242 aa14.34□□□□□ -0.11
TOP3A-204ENST00000472959 PGLYRP4Q96LB8 373 aa14.34□□□□□ -0.11
TOP3A-204ENST00000472959 RYR2Q92736 4967 aa14.34□□□□□ -0.11
TOP3A-204ENST00000472959 HIGD1CA8MV81 97 aa14.33□□□□□ -0.12
TOP3A-204ENST00000472959 TIRAPP58753 221 aa14.33□□□□□ -0.12
TOP3A-204ENST00000472959 COMMD7Q86VX2 200 aa14.33□□□□□ -0.12
TOP3A-204ENST00000472959 BORCS7Q96B45 105 aa14.33□□□□□ -0.12
TOP3A-204ENST00000472959 LINC00862A6NCI5 91 aa14.32□□□□□ -0.12
TOP3A-204ENST00000472959 F5H697 171 aa14.32□□□□□ -0.12
TOP3A-204ENST00000472959 EVI2AP22794 236 aa14.32□□□□□ -0.12
TOP3A-204ENST00000472959 LINC00315P59091 139 aa14.32□□□□□ -0.12
TOP3A-204ENST00000472959 TMEM218A2RU14 115 aa14.31□□□□□ -0.12
TOP3A-204ENST00000472959 GAGE12JA6NER3 117 aa14.31□□□□□ -0.12
TOP3A-204ENST00000472959 GAGE1Q13065 139 aa14.31□□□□□ -0.12
TOP3A-204ENST00000472959 GAGE4Q13068 117 aa14.31□□□□□ -0.12
TOP3A-204ENST00000472959 GAGE5Q13069 117 aa14.31□□□□□ -0.12
TOP3A-204ENST00000472959 GAGE13Q4V321 117 aa14.31□□□□□ -0.12
TOP3A-204ENST00000472959 A0A1B0GUT8 65 aa14.3□□□□□ -0.12
TOP3A-204ENST00000472959 LINC00694P0DN24 101 aa14.3□□□□□ -0.12
TOP3A-204ENST00000472959 SMIM15Q7Z3B0 74 aa14.3□□□□□ -0.12
TOP3A-204ENST00000472959 ATP6V0E2Q8NHE4 81 aa14.3□□□□□ -0.12
TOP3A-204ENST00000472959 DPH3P1Q9H4G8 78 aa14.3□□□□□ -0.12
TOP3A-204ENST00000472959 Q9H8V8 135 aa14.3□□□□□ -0.12
TOP3A-204ENST00000472959 NAT8BQ9UHF3 227 aa14.3□□□□□ -0.12
TOP3A-204ENST00000472959 RPL36AP83881 106 aaKnown RBP14.29□□□□□ -0.12
TOP3A-204ENST00000472959 RPL36ALQ969Q0 106 aaKnown RBP14.29□□□□□ -0.12
TOP3A-204ENST00000472959 Q9UF83 564 aa14.29□□□□□ -0.12
TOP3A-204ENST00000472959 SMIM27A0A1W2PRY6 76 aa14.28□□□□□ -0.12
TOP3A-204ENST00000472959 PPP1R2P9O14990 202 aa14.28□□□□□ -0.12
TOP3A-204ENST00000472959 MGPP08493 103 aa14.28□□□□□ -0.12
TOP3A-204ENST00000472959 NUP35Q8NFH5 326 aa14.28□□□□□ -0.12
TOP3A-204ENST00000472959 GTSF1LQ9H1H1 148 aa14.28□□□□□ -0.12
TOP3A-204ENST00000472959 IGLV2-18A0A075B6J9 118 aa14.27□□□□□ -0.13
TOP3A-204ENST00000472959 TRBV7-3A0A075B6L6 115 aa14.27□□□□□ -0.13
TOP3A-204ENST00000472959 F8W036 122 aa14.27□□□□□ -0.13
TOP3A-204ENST00000472959 H7C1H1 209 aa14.27□□□□□ -0.13
TOP3A-204ENST00000472959 HYDINQ4G0P3 5121 aa14.26□□□□□ -0.13
TOP3A-204ENST00000472959 MT-ND4LP03901 98 aa14.26□□□□□ -0.13
TOP3A-204ENST00000472959 RIGQ13278 110 aa14.26□□□□□ -0.13
TOP3A-204ENST00000472959 KMT2AQ03164 3969 aa14.25□□□□□ -0.13
TOP3A-204ENST00000472959 M0QY20 66 aa14.25□□□□□ -0.13
TOP3A-204ENST00000472959 Q6ZR54 194 aa14.25□□□□□ -0.13
TOP3A-204ENST00000472959 ANAPC16Q96DE5 110 aa14.25□□□□□ -0.13
TOP3A-204ENST00000472959 SEC11CQ9BY50 192 aa14.25□□□□□ -0.13
TOP3A-204ENST00000472959 DNAH6Q9C0G6 4158 aa14.24□□□□□ -0.13
TOP3A-204ENST00000472959 NBDYA0A0U1RRE5 68 aa14.24□□□□□ -0.13
TOP3A-204ENST00000472959 M0R2N4 97 aa14.24□□□□□ -0.13
TOP3A-204ENST00000472959 SIVA1O15304 175 aa14.24□□□□□ -0.13
TOP3A-204ENST00000472959 ADCYAP1P18509 176 aa14.24□□□□□ -0.13
TOP3A-204ENST00000472959 UBE2D3P61077 147 aa14.24□□□□□ -0.13
TOP3A-204ENST00000472959 UBE2D2P62837 147 aa14.24□□□□□ -0.13
TOP3A-204ENST00000472959 SUMO4Q6EEV6 95 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms