RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 GGACTQ9BVM4 153 aa1.43□□□□□ -2.18
XRN1-210ENST00000472697 ZNF471Q9BX82 626 aaPredicted RBP1.43□□□□□ -2.18
XRN1-210ENST00000472697 TMEM126AQ9H061 195 aa1.43□□□□□ -2.18
XRN1-210ENST00000472697 LAMTOR2Q9Y2Q5 125 aa1.43□□□□□ -2.18
XRN1-210ENST00000472697 ROS1P08922 2347 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 DNAJC13O75165 2243 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 SPTBP11277 2137 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 AIPO00170 330 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 COX4I1P13073 169 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 SDC2P34741 201 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 RRAS2P62070 204 aaPredicted RBP1.42□□□□□ -2.18
XRN1-210ENST00000472697 SS18Q15532 418 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 VMA21Q3ZAQ7 101 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 TMEM14EPQ6UXP3 125 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 MALSU1Q96EH3 234 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 C20orf166-AS1Q96NR2 134 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 IMUPQ9GZP8 106 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 CSMD2Q7Z408 3487 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 UQCRHLA0A096LP55 91 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 IGHV1-18A0A0C4DH31 117 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 A0A0J9YW62 118 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 CLPSL1A2RUU4 121 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 H0YGG7 62 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 CREBL2O60519 120 aaPredicted RBP1.42□□□□□ -2.18
XRN1-210ENST00000472697 MSMBP08118 114 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 CTSGP08311 255 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 ASAH2BP0C7U1 165 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 KRTAP10-3P60369 221 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 TPRXLQ17RH7 258 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 C1orf134Q5TEV5 83 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 SPINT4Q6UDR6 99 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 APCDD1LQ8NCL9 501 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 SPACA4Q8TDM5 124 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 TMEM106AQ96A25 262 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 TP53RKQ96S44 253 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 PRADC1Q9BSG0 188 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 RNF122Q9H9V4 155 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 BCL2L10Q9HD36 194 aa1.42□□□□□ -2.18
XRN1-210ENST00000472697 ABCA13Q86UQ4 5058 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 PRKDCP78527 4128 aaKnown RBP1.41□□□□□ -2.18
XRN1-210ENST00000472697 ZNF469Q96JG9 3925 aaPredicted RBP1.41□□□□□ -2.18
XRN1-210ENST00000472697 ALPK2Q86TB3 2170 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 IGLV2-18A0A075B6J9 118 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 LOC285095A0A1B0GVY8 99 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 FNDC10F2Z333 226 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 RER1O15258 196 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 SLC25A5P05141 298 aaKnown RBP1.41□□□□□ -2.18
XRN1-210ENST00000472697 LGALS3P17931 250 aaKnown RBP1.41□□□□□ -2.18
XRN1-210ENST00000472697 GLYATL3Q5SZD4 288 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 BCL2L15Q5TBC7 163 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 LINC00305Q7Z4B0 112 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 LINC00301Q8NCQ3 95 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 MUCL1Q96DR8 90 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 ADAT1Q9BUB4 502 aaKnown RBP1.41□□□□□ -2.18
XRN1-210ENST00000472697 DNAH1Q9P2D7 4330 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 DSPPQ9NZW4 1301 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 TMEM212A6NML5 194 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 SLC22A1O15245 554 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 TIMM17BO60830 172 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 IFNA10P01566 189 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 IGLV1-51P01701 117 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 COL8A2P25067 703 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 MAXP61244 160 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 TRAPPC6BQ86SZ2 158 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 OR4X2Q8NGF9 303 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 ZNF714Q96N38 554 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 SNRNP25Q9BV90 132 aaKnown RBP1.41□□□□□ -2.18
XRN1-210ENST00000472697 OR5AC2Q9NZP5 309 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 COPZ2Q9P299 210 aa1.41□□□□□ -2.18
XRN1-210ENST00000472697 PAIP2BQ9ULR5 123 aaKnown RBP1.41□□□□□ -2.18
XRN1-210ENST00000472697 H3BMG7 143 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 APOA2P02652 100 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 HINT1P49773 126 aaPredicted RBP1.4□□□□□ -2.19
XRN1-210ENST00000472697 ROMO1P60602 79 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 CDK5R1Q15078 307 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 EIF5AL1Q6IS14 154 aaKnown RBP1.4□□□□□ -2.19
XRN1-210ENST00000472697 SKA2Q8WVK7 121 aaPredicted RBP1.4□□□□□ -2.19
XRN1-210ENST00000472697 AP1S3Q96PC3 154 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 MND1Q9BWT6 205 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 LCE3DQ9BYE3 92 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 TRRAPQ9Y4A5 3859 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 A0A1B0GX51 115 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 A8MU10 97 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 PITX3O75364 302 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 ZNF737O75373 536 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 NDUFB2O95178 105 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 OR2H2O95918 312 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 IFI30P13284 250 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 SNRPD3P62318 126 aaKnown RBP1.4□□□□□ -2.19
XRN1-210ENST00000472697 ZNF181Q2M3W8 571 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 TCTE3Q8IZS6 198 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 OR51A4Q8NGJ6 313 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 HHLA3Q9XRX5 114 aa1.4□□□□□ -2.19
XRN1-210ENST00000472697 CHCHD2Q9Y6H1 151 aaPredicted RBP1.4□□□□□ -2.19
XRN1-210ENST00000472697 IGLV10-54A0A075B6I4 117 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 A0A0G2JMM0 328 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 A0A1W2PPB8 328 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 A0A1W2PRS3 328 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 IRGMA1A4Y4 181 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 ZNF727A8MUV8 499 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms