RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 KRTAP4-12Q9BQ66 201 aa5.33□□□□□ -1.56
USP48-207ENST00000471752 PRADC1Q9BSG0 188 aa5.33□□□□□ -1.56
USP48-207ENST00000471752 TMEM167BQ9NRX6 74 aa5.33□□□□□ -1.56
USP48-207ENST00000471752 TRAV8-6A0A0B4J262 113 aa5.32□□□□□ -1.56
USP48-207ENST00000471752 CTXND1A0A1B0GTU2 59 aa5.32□□□□□ -1.56
USP48-207ENST00000471752 FABP5P3A8MUU1 101 aa5.32□□□□□ -1.56
USP48-207ENST00000471752 B4DEV8 164 aa5.32□□□□□ -1.56
USP48-207ENST00000471752 PSCAO43653 123 aa5.32□□□□□ -1.56
USP48-207ENST00000471752 MBP02144 154 aa5.32□□□□□ -1.56
USP48-207ENST00000471752 NTN5Q8WTR8 489 aaPredicted RBP5.32□□□□□ -1.56
USP48-207ENST00000471752 NDFIP1Q9BT67 221 aa5.32□□□□□ -1.56
USP48-207ENST00000471752 MRPL18Q9H0U6 180 aaKnown RBP5.32□□□□□ -1.56
USP48-207ENST00000471752 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.31□□□□□ -1.56
USP48-207ENST00000471752 SERTM2A0A1B0GWG4 89 aa5.31□□□□□ -1.56
USP48-207ENST00000471752 ARPC5O15511 151 aa5.31□□□□□ -1.56
USP48-207ENST00000471752 S100A4P26447 101 aaKnown RBP5.31□□□□□ -1.56
USP48-207ENST00000471752 ASIPP42127 132 aa5.31□□□□□ -1.56
USP48-207ENST00000471752 SSTP61278 116 aa5.31□□□□□ -1.56
USP48-207ENST00000471752 CCL20P78556 96 aa5.31□□□□□ -1.56
USP48-207ENST00000471752 ZNF674Q2M3X9 581 aa5.31□□□□□ -1.56
USP48-207ENST00000471752 SAPCD1Q5SSQ6 148 aa5.31□□□□□ -1.56
USP48-207ENST00000471752 FAM74A4Q5TZK3 123 aa5.31□□□□□ -1.56
USP48-207ENST00000471752 ZFP2Q6ZN57 461 aa5.31□□□□□ -1.56
USP48-207ENST00000471752 C10orf126Q8N4M7 172 aa5.31□□□□□ -1.56
USP48-207ENST00000471752 INO80EQ8NBZ0 244 aaPredicted RBP5.31□□□□□ -1.56
USP48-207ENST00000471752 MAP1LC3B2A6NCE7 125 aa5.3□□□□□ -1.56
USP48-207ENST00000471752 K7EP13 123 aa5.3□□□□□ -1.56
USP48-207ENST00000471752 K7EQM0 130 aa5.3□□□□□ -1.56
USP48-207ENST00000471752 M0R381 172 aa5.3□□□□□ -1.56
USP48-207ENST00000471752 PAGE4O60829 102 aa5.3□□□□□ -1.56
USP48-207ENST00000471752 C1QBP02746 253 aa5.3□□□□□ -1.56
USP48-207ENST00000471752 MGST1P10620 155 aaKnown RBP5.3□□□□□ -1.56
USP48-207ENST00000471752 COX8CQ7Z4L0 72 aa5.3□□□□□ -1.56
USP48-207ENST00000471752 SH2D6Q7Z4S9 175 aa5.3□□□□□ -1.56
USP48-207ENST00000471752 SFRP2Q96HF1 295 aa5.3□□□□□ -1.56
USP48-207ENST00000471752 MAP1LC3BQ9GZQ8 125 aa5.3□□□□□ -1.56
USP48-207ENST00000471752 BATF3Q9NR55 127 aa5.3□□□□□ -1.56
USP48-207ENST00000471752 IL36BQ9NZH7 164 aa5.3□□□□□ -1.56
USP48-207ENST00000471752 BORCS7-ASMTA0A0B4J1R7 106 aa5.29□□□□□ -1.56
USP48-207ENST00000471752 A8MWV9 139 aa5.29□□□□□ -1.56
USP48-207ENST00000471752 GHRHP01286 108 aa5.29□□□□□ -1.56
USP48-207ENST00000471752 LTAP01374 205 aa5.29□□□□□ -1.56
USP48-207ENST00000471752 KRTAP10-4P60372 401 aaPredicted RBP5.29□□□□□ -1.56
USP48-207ENST00000471752 ZFP69Q49AA0 526 aa5.29□□□□□ -1.56
USP48-207ENST00000471752 DNLZQ5SXM8 178 aa5.29□□□□□ -1.56
USP48-207ENST00000471752 AKR1C8PQ5T2L2 129 aa5.29□□□□□ -1.56
USP48-207ENST00000471752 CST9LP1Q5W188 147 aa5.29□□□□□ -1.56
USP48-207ENST00000471752 NIT1Q86X76 327 aa5.29□□□□□ -1.56
USP48-207ENST00000471752 OR10AG1Q8NH19 301 aa5.29□□□□□ -1.56
USP48-207ENST00000471752 DEFB104AQ8WTQ1 72 aa5.29□□□□□ -1.56
USP48-207ENST00000471752 FRZBQ92765 325 aa5.29□□□□□ -1.56
USP48-207ENST00000471752 KLK12Q9UKR0 248 aa5.29□□□□□ -1.56
USP48-207ENST00000471752 GZMBP10144 247 aa5.28□□□□□ -1.56
USP48-207ENST00000471752 FAM162BQ5T6X4 162 aa5.28□□□□□ -1.56
USP48-207ENST00000471752 ENHOQ6UWT2 76 aa5.28□□□□□ -1.56
USP48-207ENST00000471752 Q6ZSA8 131 aa5.28□□□□□ -1.56
USP48-207ENST00000471752 SFT2D1Q8WV19 159 aa5.28□□□□□ -1.56
USP48-207ENST00000471752 HIST1H2BAQ96A08 127 aa5.28□□□□□ -1.56
USP48-207ENST00000471752 TMEM70Q9BUB7 260 aa5.28□□□□□ -1.56
USP48-207ENST00000471752 IGKV2D-24A0A075B6R9 120 aa5.27□□□□□ -1.57
USP48-207ENST00000471752 RBFOX3A6NFN3 312 aa5.27□□□□□ -1.57
USP48-207ENST00000471752 CIDEAO60543 219 aa5.27□□□□□ -1.57
USP48-207ENST00000471752 UBE2D3P61077 147 aa5.27□□□□□ -1.57
USP48-207ENST00000471752 UBE2D2P62837 147 aa5.27□□□□□ -1.57
USP48-207ENST00000471752 NTM-AS1Q6ZSK4 140 aa5.27□□□□□ -1.57
USP48-207ENST00000471752 KCNRGQ8N5I3 272 aa5.27□□□□□ -1.57
USP48-207ENST00000471752 NEXN-AS1Q8NBZ9 246 aa5.27□□□□□ -1.57
USP48-207ENST00000471752 FAM213BQ8TBF2 198 aa5.27□□□□□ -1.57
USP48-207ENST00000471752 MBD3L1Q8WWY6 194 aa5.27□□□□□ -1.57
USP48-207ENST00000471752 UBE2WQ96B02 151 aa5.27□□□□□ -1.57
USP48-207ENST00000471752 FMC1Q96HJ9 113 aa5.27□□□□□ -1.57
USP48-207ENST00000471752 DERL1Q9BUN8 251 aa5.27□□□□□ -1.57
USP48-207ENST00000471752 MLST8Q9BVC4 326 aa5.27□□□□□ -1.57
USP48-207ENST00000471752 ZFP30Q9Y2G7 519 aa5.27□□□□□ -1.57
USP48-207ENST00000471752 PHLDA3Q9Y5J5 127 aa5.27□□□□□ -1.57
USP48-207ENST00000471752 TRBV6-1A0A0K0K1D8 114 aa5.26□□□□□ -1.57
USP48-207ENST00000471752 PANO1I0J062 215 aa5.26□□□□□ -1.57
USP48-207ENST00000471752 UBE2G1P62253 170 aa5.26□□□□□ -1.57
USP48-207ENST00000471752 LAGE3Q14657 143 aa5.26□□□□□ -1.57
USP48-207ENST00000471752 PIK3CD-AS1Q5SR53 167 aa5.26□□□□□ -1.57
USP48-207ENST00000471752 SCXQ7RTU7 201 aa5.26□□□□□ -1.57
USP48-207ENST00000471752 Q8N976 141 aa5.26□□□□□ -1.57
USP48-207ENST00000471752 KIF25-AS1Q9Y6Z4 181 aa5.26□□□□□ -1.57
USP48-207ENST00000471752 TNXBP22105 4242 aa5.25□□□□□ -1.57
USP48-207ENST00000471752 TRAV8-3A0A0A6YYJ7 113 aa5.25□□□□□ -1.57
USP48-207ENST00000471752 RAB19A4D1S5 217 aa5.25□□□□□ -1.57
USP48-207ENST00000471752 IGLV2-8P01709 118 aa5.25□□□□□ -1.57
USP48-207ENST00000471752 TPT1P13693 172 aaKnown RBP5.25□□□□□ -1.57
USP48-207ENST00000471752 AKR1C3P42330 323 aa5.25□□□□□ -1.57
USP48-207ENST00000471752 RGS21Q2M5E4 152 aa5.25□□□□□ -1.57
USP48-207ENST00000471752 MPV17L2Q567V2 206 aa5.25□□□□□ -1.57
USP48-207ENST00000471752 PRR27Q6MZM9 219 aa5.25□□□□□ -1.57
USP48-207ENST00000471752 KRTAP26-1Q6PEX3 210 aa5.25□□□□□ -1.57
USP48-207ENST00000471752 TMUB2Q71RG4 321 aa5.25□□□□□ -1.57
USP48-207ENST00000471752 BAGE2Q86Y30 109 aa5.25□□□□□ -1.57
USP48-207ENST00000471752 TM2D2Q9BX73 214 aa5.25□□□□□ -1.57
USP48-207ENST00000471752 ZNF471Q9BX82 626 aaPredicted RBP5.25□□□□□ -1.57
USP48-207ENST00000471752 TMEM262E9PQX1 116 aa5.24□□□□□ -1.57
USP48-207ENST00000471752 HNRNPA3P51991 378 aaKnown RBP5.24□□□□□ -1.57
USP48-207ENST00000471752 CLPSL2Q6UWE3 100 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms