RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 LELP1Q5T871 98 aa10.29□□□□□ -0.76
COL1A1-203ENST00000471344 C10orf126Q8N4M7 172 aa10.29□□□□□ -0.76
COL1A1-203ENST00000471344 ATP6V0E2Q8NHE4 81 aa10.29□□□□□ -0.76
COL1A1-203ENST00000471344 FMC1Q96HJ9 113 aa10.29□□□□□ -0.76
COL1A1-203ENST00000471344 IL36BQ9NZH7 164 aa10.29□□□□□ -0.76
COL1A1-203ENST00000471344 VPS13BQ7Z7G8 4022 aa10.29□□□□□ -0.76
COL1A1-203ENST00000471344 TRAV8-6A0A0B4J262 113 aa10.28□□□□□ -0.76
COL1A1-203ENST00000471344 TRBV6-1A0A0K0K1D8 114 aa10.28□□□□□ -0.76
COL1A1-203ENST00000471344 LRCOL1A6NCL2 159 aa10.28□□□□□ -0.76
COL1A1-203ENST00000471344 A8MWV9 139 aa10.28□□□□□ -0.76
COL1A1-203ENST00000471344 IBA57-AS1B1ANH7 110 aa10.28□□□□□ -0.76
COL1A1-203ENST00000471344 ARMS2P0C7Q2 107 aa10.28□□□□□ -0.76
COL1A1-203ENST00000471344 XGP55808 180 aa10.28□□□□□ -0.76
COL1A1-203ENST00000471344 DNLZQ5SXM8 178 aa10.28□□□□□ -0.76
COL1A1-203ENST00000471344 CDPF1Q6NVV7 123 aa10.28□□□□□ -0.76
COL1A1-203ENST00000471344 GTSF1LQ9H1H1 148 aa10.28□□□□□ -0.76
COL1A1-203ENST00000471344 TRAV1-1A0A0B4J248 108 aa10.27□□□□□ -0.77
COL1A1-203ENST00000471344 LTAP01374 205 aa10.27□□□□□ -0.77
COL1A1-203ENST00000471344 RAB5CP51148 216 aa10.27□□□□□ -0.77
COL1A1-203ENST00000471344 UBE2G1P62253 170 aa10.27□□□□□ -0.77
COL1A1-203ENST00000471344 HAMPP81172 84 aa10.27□□□□□ -0.77
COL1A1-203ENST00000471344 FAM162BQ5T6X4 162 aa10.27□□□□□ -0.77
COL1A1-203ENST00000471344 ZFP2Q6ZN57 461 aa10.27□□□□□ -0.77
COL1A1-203ENST00000471344 GNG13Q9P2W3 67 aa10.27□□□□□ -0.77
COL1A1-203ENST00000471344 A0A087WWL8 130 aa10.26□□□□□ -0.77
COL1A1-203ENST00000471344 ZNF674Q2M3X9 581 aa10.26□□□□□ -0.77
COL1A1-203ENST00000471344 FAM74A4Q5TZK3 123 aa10.26□□□□□ -0.77
COL1A1-203ENST00000471344 EIF5AL1Q6IS14 154 aaKnown RBP10.26□□□□□ -0.77
COL1A1-203ENST00000471344 M0R381 172 aa10.25□□□□□ -0.77
COL1A1-203ENST00000471344 PSCAO43653 123 aa10.25□□□□□ -0.77
COL1A1-203ENST00000471344 AKR1C3P42330 323 aa10.25□□□□□ -0.77
COL1A1-203ENST00000471344 RPL19P84098 196 aaKnown RBP10.25□□□□□ -0.77
COL1A1-203ENST00000471344 LINC01559Q495D7 138 aa10.25□□□□□ -0.77
COL1A1-203ENST00000471344 WFDC2Q14508 124 aa10.24□□□□□ -0.77
COL1A1-203ENST00000471344 DERL1Q9BUN8 251 aa10.24□□□□□ -0.77
COL1A1-203ENST00000471344 S100A9P06702 114 aaKnown RBP10.23□□□□□ -0.77
COL1A1-203ENST00000471344 DAZ4Q86SG3 579 aaKnown RBP10.23□□□□□ -0.77
COL1A1-203ENST00000471344 SYT8Q8NBV8 401 aa10.23□□□□□ -0.77
COL1A1-203ENST00000471344 DAZ3Q9NR90 486 aaKnown RBP10.23□□□□□ -0.77
COL1A1-203ENST00000471344 PHLDA3Q9Y5J5 127 aa10.23□□□□□ -0.77
COL1A1-203ENST00000471344 GCSHP23434 173 aa10.22□□□□□ -0.77
COL1A1-203ENST00000471344 SFRP2Q96HF1 295 aa10.22□□□□□ -0.77
COL1A1-203ENST00000471344 DNAJC30Q96LL9 226 aa10.22□□□□□ -0.77
COL1A1-203ENST00000471344 MANBALQ9NQG1 85 aa10.22□□□□□ -0.77
COL1A1-203ENST00000471344 IGLV5-52A0A0A0MRZ9 124 aa10.21□□□□□ -0.77
COL1A1-203ENST00000471344 RHODO00212 210 aa10.21□□□□□ -0.77
COL1A1-203ENST00000471344 Q8N814 137 aa10.21□□□□□ -0.77
COL1A1-203ENST00000471344 C11orf52Q96A22 123 aa10.21□□□□□ -0.77
COL1A1-203ENST00000471344 MUC21A0A0G2JKD1 596 aa10.2□□□□□ -0.78
COL1A1-203ENST00000471344 MUC21A0A140T8X8 626 aa10.2□□□□□ -0.78
COL1A1-203ENST00000471344 EPM2AB3EWF7 344 aa10.2□□□□□ -0.78
COL1A1-203ENST00000471344 LECT2O14960 151 aa10.2□□□□□ -0.78
COL1A1-203ENST00000471344 BCL2P10415 239 aa10.2□□□□□ -0.78
COL1A1-203ENST00000471344 LAGE3Q14657 143 aa10.2□□□□□ -0.78
COL1A1-203ENST00000471344 OR10AG1Q8NH19 301 aa10.2□□□□□ -0.78
COL1A1-203ENST00000471344 MLST8Q9BVC4 326 aa10.2□□□□□ -0.78
COL1A1-203ENST00000471344 HERC1Q15751 4861 aa10.2□□□□□ -0.78
COL1A1-203ENST00000471344 RAB19A4D1S5 217 aa10.19□□□□□ -0.78
COL1A1-203ENST00000471344 SMR3BP02814 79 aaPredicted RBP10.19□□□□□ -0.78
COL1A1-203ENST00000471344 RPL35P42766 123 aaKnown RBP10.19□□□□□ -0.78
COL1A1-203ENST00000471344 MEF2BQ02080 365 aaPredicted RBP10.19□□□□□ -0.78
COL1A1-203ENST00000471344 PRR27Q6MZM9 219 aa10.19□□□□□ -0.78
COL1A1-203ENST00000471344 ZFP82Q8N141 532 aa10.19□□□□□ -0.78
COL1A1-203ENST00000471344 LYPD6BQ8NI32 183 aa10.19□□□□□ -0.78
COL1A1-203ENST00000471344 MYCBP2O75592 4640 aa10.19□□□□□ -0.78
COL1A1-203ENST00000471344 SRRM2Q9UQ35 2752 aaKnown RBP10.19□□□□□ -0.78
COL1A1-203ENST00000471344 TRBV20OR9-2A0A075B6H5 130 aa10.18□□□□□ -0.78
COL1A1-203ENST00000471344 IGLV2-8P01709 118 aa10.18□□□□□ -0.78
COL1A1-203ENST00000471344 Q5VSD8 79 aa10.18□□□□□ -0.78
COL1A1-203ENST00000471344 BAGE2Q86Y30 109 aa10.18□□□□□ -0.78
COL1A1-203ENST00000471344 FAM30AQ9NZY2 134 aa10.18□□□□□ -0.78
COL1A1-203ENST00000471344 A0A087WWC5 75 aa10.17□□□□□ -0.78
COL1A1-203ENST00000471344 TEX46H3BTG2 121 aa10.17□□□□□ -0.78
COL1A1-203ENST00000471344 CXCL1P09341 107 aa10.17□□□□□ -0.78
COL1A1-203ENST00000471344 SSTP61278 116 aa10.17□□□□□ -0.78
COL1A1-203ENST00000471344 NIT1Q86X76 327 aa10.17□□□□□ -0.78
COL1A1-203ENST00000471344 UBE2D3P61077 147 aa10.16□□□□□ -0.78
COL1A1-203ENST00000471344 UBE2D2P62837 147 aa10.16□□□□□ -0.78
COL1A1-203ENST00000471344 BLOC1S1P78537 153 aa10.16□□□□□ -0.78
COL1A1-203ENST00000471344 CENPWQ5EE01 88 aa10.16□□□□□ -0.78
COL1A1-203ENST00000471344 NTN5Q8WTR8 489 aaPredicted RBP10.16□□□□□ -0.78
COL1A1-203ENST00000471344 VAX2Q9UIW0 290 aa10.16□□□□□ -0.78
COL1A1-203ENST00000471344 TRBV10-1A0A0K0K1A3 114 aa10.15□□□□□ -0.78
COL1A1-203ENST00000471344 IFNA1P01562 189 aa10.15□□□□□ -0.78
COL1A1-203ENST00000471344 TM2D2Q9BX73 214 aa10.15□□□□□ -0.78
COL1A1-203ENST00000471344 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.14□□□□□ -0.79
COL1A1-203ENST00000471344 TRAV8-3A0A0A6YYJ7 113 aa10.14□□□□□ -0.79
COL1A1-203ENST00000471344 SNAI2O43623 268 aa10.14□□□□□ -0.79
COL1A1-203ENST00000471344 ZNF56Q15929 161 aa10.14□□□□□ -0.79
COL1A1-203ENST00000471344 TEX261Q6UWH6 196 aa10.14□□□□□ -0.79
COL1A1-203ENST00000471344 NEXN-AS1Q8NBZ9 246 aa10.14□□□□□ -0.79
COL1A1-203ENST00000471344 BAALCQ8WXS3 180 aa10.14□□□□□ -0.79
COL1A1-203ENST00000471344 MED9Q9NWA0 146 aa10.14□□□□□ -0.79
COL1A1-203ENST00000471344 KLK12Q9UKR0 248 aa10.14□□□□□ -0.79
COL1A1-203ENST00000471344 TRBV7-3A0A075B6L6 115 aa10.13□□□□□ -0.79
COL1A1-203ENST00000471344 RBFOX3A6NFN3 312 aa10.13□□□□□ -0.79
COL1A1-203ENST00000471344 GZMBP10144 247 aa10.13□□□□□ -0.79
COL1A1-203ENST00000471344 RPL36AP83881 106 aaKnown RBP10.13□□□□□ -0.79
COL1A1-203ENST00000471344 LINC01620Q4KN68 170 aa10.13□□□□□ -0.79
COL1A1-203ENST00000471344 TOR2AQ5JU69 321 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms