RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 PTH2Q96A98 100 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 PACRGQ96M98 296 aaPredicted RBP4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 C9orf85Q96MD7 179 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 LINC01587Q99440 93 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 ZMAT5Q9UDW3 170 aaKnown RBP4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 LAMTOR2Q9Y2Q5 125 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 TIMM8BQ9Y5J9 83 aaPredicted RBP4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 U3KQK5 164 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 OTOGQ6ZRI0 2925 aa4.44□□□□□ -1.7
SMNDC1-204ENST00000471297 ZNF469Q96JG9 3925 aaPredicted RBP4.43□□□□□ -1.7
SMNDC1-204ENST00000471297 TMEM18Q96B42 140 aa4.43□□□□□ -1.7
SMNDC1-204ENST00000471297 MRAP2Q96G30 205 aa4.43□□□□□ -1.7
SMNDC1-204ENST00000471297 RNF185Q96GF1 192 aa4.43□□□□□ -1.7
SMNDC1-204ENST00000471297 SPXQ9BT56 116 aa4.43□□□□□ -1.7
SMNDC1-204ENST00000471297 DPH3P1Q9H4G8 78 aa4.43□□□□□ -1.7
SMNDC1-204ENST00000471297 MSRB1Q9NZV6 116 aa4.43□□□□□ -1.7
SMNDC1-204ENST00000471297 GOLT1BQ9Y3E0 138 aa4.43□□□□□ -1.7
SMNDC1-204ENST00000471297 CELSR1Q9NYQ6 3014 aa4.43□□□□□ -1.7
SMNDC1-204ENST00000471297 SVEP1Q4LDE5 3571 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 CSMD1Q96PZ7 3565 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 HIVEP1P15822 2718 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 AKAP9Q99996 3911 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 M0R381 172 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 SERF1AO75920 110 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 PPP1R17O96001 155 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 LINC00614P0C842 121 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 RBMY1A1P0DJD3 496 aaKnown RBP4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 RBMY1CP0DJD4 496 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 SMIM17P0DL12 118 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 EVI2AP22794 236 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 CKS2P33552 79 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 AKR1D1P51857 326 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 ZNF415Q09FC8 603 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 RBMY1FQ15415 496 aaKnown RBP4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 NIT1Q86X76 327 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 C1orf158Q8N1D5 194 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 POM121L12Q8N7R1 296 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 CHCHD1Q96BP2 118 aaKnown RBP4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 PRELID3AQ96N28 172 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 AP1S3Q96PC3 154 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 TMEM208Q9BTX3 173 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 NDUFAF3Q9BU61 184 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 CSTL1Q9H114 145 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 GSN-AS1Q9NRJ2 163 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 MDFICQ9P1T7 246 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 XCL2Q9UBD3 114 aa4.42□□□□□ -1.7
SMNDC1-204ENST00000471297 IFITM10A6NMD0 228 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 PRSS47A8MTI9 375 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 D6R8Y8 96 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 M0R2P5 195 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 PRYO14603 147 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 NUPR1O60356 82 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 HSBP1O75506 76 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 FABP4P15090 132 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 IGLL1P15814 213 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 RPL35AP18077 110 aaKnown RBP4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 PMCHP20382 165 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 IQCJQ1A5X6 159 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 PDZD11Q5EBL8 140 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 DEFB125Q8N687 156 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 C14orf178Q8N769 122 aaPredicted RBP4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 PRSS3P2Q8NHM4 247 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 RCHY1Q96PM5 261 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 HIST1H2BLQ99880 126 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 SAMD10Q9BYL1 202 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 MAP1LC3AQ9H492 121 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 MTORP42345 2549 aa4.41□□□□□ -1.7
SMNDC1-204ENST00000471297 F8P00451 2351 aa4.4□□□□□ -1.7
SMNDC1-204ENST00000471297 KIR2DL5BA0A0G2JN68 375 aa4.4□□□□□ -1.71
SMNDC1-204ENST00000471297 KIR2DL5BA0A0G2JPC4 375 aa4.4□□□□□ -1.71
SMNDC1-204ENST00000471297 A8MWV9 139 aa4.4□□□□□ -1.71
SMNDC1-204ENST00000471297 MGPP08493 103 aa4.4□□□□□ -1.71
SMNDC1-204ENST00000471297 GIG44P09565 113 aaPredicted RBP4.4□□□□□ -1.71
SMNDC1-204ENST00000471297 HTN1P15515 57 aa4.4□□□□□ -1.71
SMNDC1-204ENST00000471297 RNASEKQ6P5S7 137 aaKnown RBP4.4□□□□□ -1.71
SMNDC1-204ENST00000471297 FA2HQ7L5A8 372 aa4.4□□□□□ -1.71
SMNDC1-204ENST00000471297 KIR2DL5AQ8N109 375 aa4.4□□□□□ -1.71
SMNDC1-204ENST00000471297 C11orf72Q8NBR9 251 aa4.4□□□□□ -1.71
SMNDC1-204ENST00000471297 CSNK1G2-AS1Q8NCQ2 148 aa4.4□□□□□ -1.71
SMNDC1-204ENST00000471297 OR10D4PQ8NGN7 298 aa4.4□□□□□ -1.71
SMNDC1-204ENST00000471297 KIR2DL5BQ8NHK3 375 aa4.4□□□□□ -1.71
SMNDC1-204ENST00000471297 SPATA3Q8NHX4 192 aa4.4□□□□□ -1.71
SMNDC1-204ENST00000471297 WFDC10AQ9H1F0 79 aa4.4□□□□□ -1.71
SMNDC1-204ENST00000471297 NXT2Q9NPJ8 142 aaKnown RBP4.4□□□□□ -1.71
SMNDC1-204ENST00000471297 KIF25-AS1Q9Y6Z4 181 aa4.4□□□□□ -1.71
SMNDC1-204ENST00000471297 IGHV3OR16-12A0A075B7B8 117 aa4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 LINC01546A6NGU7 62 aa4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 SMIM9A6NGZ8 99 aa4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 SMKR1H3BMG3 65 aa4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 CIDEAO60543 219 aa4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 NPYP01303 97 aa4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 CRYGDP07320 174 aa4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 AMTP48728 403 aa4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 APOC4P55056 127 aa4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 RRN3P1Q2M238 152 aa4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 LGALS9BQ3B8N2 356 aa4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 ZNF876PQ49A33 203 aa4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 ZNF705AQ6ZN79 300 aaPredicted RBP4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 Q8N8P6 123 aa4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 TMEM263Q8WUH6 116 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms