RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 ZNF709Q8N972 641 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 ST20-AS1Q8NBB2 130 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 OR8A1Q8NGG7 326 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 FXYD5Q96DB9 178 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 LINC01587Q99440 93 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 GINS3Q9BRX5 216 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 ZNF2Q9BSG1 426 aaPredicted RBP3.2□□□□□ -1.9
CKS1B-204ENST00000471245 PRNDQ9UKY0 176 aa3.2□□□□□ -1.9
CKS1B-204ENST00000471245 SMIM9A6NGZ8 99 aa3.19□□□□□ -1.9
CKS1B-204ENST00000471245 GPR31O00270 319 aa3.19□□□□□ -1.9
CKS1B-204ENST00000471245 CYB5BO43169 146 aa3.19□□□□□ -1.9
CKS1B-204ENST00000471245 OR7C2O60412 319 aa3.19□□□□□ -1.9
CKS1B-204ENST00000471245 HIST1H1EP10412 219 aaKnown RBP3.19□□□□□ -1.9
CKS1B-204ENST00000471245 NPPCP23582 126 aa3.19□□□□□ -1.9
CKS1B-204ENST00000471245 CBX5P45973 191 aa3.19□□□□□ -1.9
CKS1B-204ENST00000471245 CCL18P55774 89 aa3.19□□□□□ -1.9
CKS1B-204ENST00000471245 HAMPP81172 84 aa3.19□□□□□ -1.9
CKS1B-204ENST00000471245 SMAGPQ0VAQ4 97 aa3.19□□□□□ -1.9
CKS1B-204ENST00000471245 DHRS2Q13268 280 aa3.19□□□□□ -1.9
CKS1B-204ENST00000471245 KRTAP13-3Q3SY46 172 aa3.19□□□□□ -1.9
CKS1B-204ENST00000471245 LUZP6Q538Z0 58 aa3.19□□□□□ -1.9
CKS1B-204ENST00000471245 Q6ZRN7 208 aaPredicted RBP3.19□□□□□ -1.9
CKS1B-204ENST00000471245 C1orf158Q8N1D5 194 aa3.19□□□□□ -1.9
CKS1B-204ENST00000471245 RTBDNQ9BSG5 229 aaPredicted RBP3.19□□□□□ -1.9
CKS1B-204ENST00000471245 SLC35B3Q9H1N7 401 aa3.19□□□□□ -1.9
CKS1B-204ENST00000471245 K7EPK0 472 aa3.18□□□□□ -1.9
CKS1B-204ENST00000471245 ISLRO14498 428 aa3.18□□□□□ -1.9
CKS1B-204ENST00000471245 TCRBP04435 133 aa3.18□□□□□ -1.9
CKS1B-204ENST00000471245 IGLC1P0CG04 106 aa3.18□□□□□ -1.9
CKS1B-204ENST00000471245 HLA-DRB4P13762 266 aa3.18□□□□□ -1.9
CKS1B-204ENST00000471245 RPL12P30050 165 aaKnown RBP3.18□□□□□ -1.9
CKS1B-204ENST00000471245 ETV6P41212 452 aa3.18□□□□□ -1.9
CKS1B-204ENST00000471245 DAD1P61803 113 aa3.18□□□□□ -1.9
CKS1B-204ENST00000471245 BTN1A1Q13410 526 aa3.18□□□□□ -1.9
CKS1B-204ENST00000471245 FAM104BQ5XKR9 115 aa3.18□□□□□ -1.9
CKS1B-204ENST00000471245 PRSS54Q6PEW0 395 aa3.18□□□□□ -1.9
CKS1B-204ENST00000471245 OR4X1Q8NH49 305 aa3.18□□□□□ -1.9
CKS1B-204ENST00000471245 DEDD2Q8WXF8 326 aa3.18□□□□□ -1.9
CKS1B-204ENST00000471245 MARVELD1Q9BSK0 173 aa3.18□□□□□ -1.9
CKS1B-204ENST00000471245 FKBP11Q9NYL4 201 aa3.18□□□□□ -1.9
CKS1B-204ENST00000471245 HLA-DRB4X5D2U9 266 aa3.18□□□□□ -1.9
CKS1B-204ENST00000471245 A8MTW9 85 aa3.17□□□□□ -1.9
CKS1B-204ENST00000471245 LINC00614P0C842 121 aa3.17□□□□□ -1.9
CKS1B-204ENST00000471245 SCGB1C2P0DMR2 95 aa3.17□□□□□ -1.9
CKS1B-204ENST00000471245 NTF3P20783 257 aa3.17□□□□□ -1.9
CKS1B-204ENST00000471245 RPL5P46777 297 aaKnown RBP3.17□□□□□ -1.9
CKS1B-204ENST00000471245 H2BFSP57053 126 aa3.17□□□□□ -1.9
CKS1B-204ENST00000471245 TAS2R20P59543 309 aa3.17□□□□□ -1.9
CKS1B-204ENST00000471245 ERHP84090 104 aaKnown RBP3.17□□□□□ -1.9
CKS1B-204ENST00000471245 CENPWQ5EE01 88 aa3.17□□□□□ -1.9
CKS1B-204ENST00000471245 SPATA31B1PQ5VZV4 182 aa3.17□□□□□ -1.9
CKS1B-204ENST00000471245 FA2HQ7L5A8 372 aa3.17□□□□□ -1.9
CKS1B-204ENST00000471245 FAM19A3Q7Z5A8 133 aa3.17□□□□□ -1.9
CKS1B-204ENST00000471245 SCGB1C1Q8TD33 95 aa3.17□□□□□ -1.9
CKS1B-204ENST00000471245 CNBD2Q96M20 576 aa3.17□□□□□ -1.9
CKS1B-204ENST00000471245 GPR82Q96P67 336 aa3.17□□□□□ -1.9
CKS1B-204ENST00000471245 TP53RKQ96S44 253 aa3.17□□□□□ -1.9
CKS1B-204ENST00000471245 TSC22D3Q99576 134 aa3.17□□□□□ -1.9
CKS1B-204ENST00000471245 ANAPC13Q9BS18 74 aa3.17□□□□□ -1.9
CKS1B-204ENST00000471245 ZNF586Q9NXT0 402 aa3.17□□□□□ -1.9
CKS1B-204ENST00000471245 C14orf166Q9Y224 244 aaKnown RBP3.17□□□□□ -1.9
CKS1B-204ENST00000471245 TNXBP22105 4242 aa3.17□□□□□ -1.9
CKS1B-204ENST00000471245 HSPA13P48723 471 aa3.16□□□□□ -1.9
CKS1B-204ENST00000471245 MP68P56378 58 aa3.16□□□□□ -1.9
CKS1B-204ENST00000471245 RANP62826 216 aaKnown RBP3.16□□□□□ -1.9
CKS1B-204ENST00000471245 PPP1R1AQ13522 171 aa3.16□□□□□ -1.9
CKS1B-204ENST00000471245 SP6Q3SY56 376 aa3.16□□□□□ -1.9
CKS1B-204ENST00000471245 AMTNQ6UX39 209 aa3.16□□□□□ -1.9
CKS1B-204ENST00000471245 IZUMO2Q6UXV1 221 aa3.16□□□□□ -1.9
CKS1B-204ENST00000471245 Q6ZRU5 148 aa3.16□□□□□ -1.9
CKS1B-204ENST00000471245 LHFPL1Q86WI0 220 aa3.16□□□□□ -1.9
CKS1B-204ENST00000471245 LHFPL5Q8TAF8 219 aa3.16□□□□□ -1.9
CKS1B-204ENST00000471245 DEFB104AQ8WTQ1 72 aa3.16□□□□□ -1.9
CKS1B-204ENST00000471245 BORCS5Q969J3 196 aa3.16□□□□□ -1.9
CKS1B-204ENST00000471245 UPK3BQ9BT76 320 aa3.16□□□□□ -1.9
CKS1B-204ENST00000471245 SSR3Q9UNL2 185 aa3.16□□□□□ -1.9
CKS1B-204ENST00000471245 ZNF706Q9Y5V0 76 aaPredicted RBP3.16□□□□□ -1.9
CKS1B-204ENST00000471245 LRP2P98164 4655 aa3.16□□□□□ -1.9
CKS1B-204ENST00000471245 IGKV1D-37A0A075B6S9 117 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 A0A087WTM6 91 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 A0A0J9YX75 114 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 A8MUU9 505 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 SEC11BP0C7V7 166 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 PRB4P10163 310 aaPredicted RBP3.15□□□□□ -1.91
CKS1B-204ENST00000471245 OR10J1P30954 320 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 SNCAP37840 140 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 INPP1P49441 399 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 GABARAPL2P60520 117 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 YPEL3P61236 119 aaPredicted RBP3.15□□□□□ -1.91
CKS1B-204ENST00000471245 OR2F1Q13607 317 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 RRN3P1Q2M238 152 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 TMEM69Q5SWH9 247 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 FAM78BQ5VT40 261 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 SCGB1D4Q6XE38 83 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 FOXI2Q6ZQN5 318 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 MIR7-3HGQ8N6C7 128 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 GPR146Q96CH1 333 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 LINC00052Q96N35 136 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 GNB1LQ9BYB4 327 aa3.15□□□□□ -1.91
CKS1B-204ENST00000471245 ALG5Q9Y673 324 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms