RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 TRGV5A0A0B4J1U4 118 aa3.22□□□□□ -1.89
VPS50-210ENST00000471188 TRBV30A0A0K0K1B3 111 aa3.22□□□□□ -1.89
VPS50-210ENST00000471188 PRAC2D3DTV9 90 aa3.22□□□□□ -1.89
VPS50-210ENST00000471188 M0R1B8 84 aa3.22□□□□□ -1.89
VPS50-210ENST00000471188 ATOX1O00244 68 aa3.22□□□□□ -1.89
VPS50-210ENST00000471188 PHLDA3Q9Y5J5 127 aa3.22□□□□□ -1.89
VPS50-210ENST00000471188 A0A0G2JNJ9 132 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 C17orf100A8MU93 164 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 F5H697 171 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 I3L2K1 104 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 J3QLI3 93 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 ATP5G1P05496 136 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 ACYP1P07311 99 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 CRYGAP11844 174 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 WT1P19544 449 aaPredicted RBP3.21□□□□□ -1.9
VPS50-210ENST00000471188 UCNP55089 124 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 CCL8P80075 99 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 ZNF672Q499Z4 452 aaPredicted RBP3.21□□□□□ -1.9
VPS50-210ENST00000471188 TMEM190Q8WZ59 177 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 SLC50A1Q9BRV3 221 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 CYSTM1Q9H1C7 97 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 JPT2Q9H910 190 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 C11orf21Q9P2W6 132 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 PEMTQ9UBM1 199 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 Q9UFV3 132 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 MSRB2Q9Y3D2 182 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 IGLV4-69A0A075B6H9 119 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 IGHV3-49A0A0A0MS15 119 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 IGKV3-15P01624 115 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 CRYGDP07320 174 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 TMEM258P61165 79 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 Q6ZT83 130 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 ZNRF2Q8NHG8 242 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 SMCR5Q8TEV8 140 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 SPANXCQ9NY87 97 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 PTPRQQ9UMZ3 2332 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 MED13LQ71F56 2210 aa3.21□□□□□ -1.9
VPS50-210ENST00000471188 SPENQ96T58 3664 aaKnown RBP3.21□□□□□ -1.9
VPS50-210ENST00000471188 IGHV1-18A0A0C4DH31 117 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 IGKV3D-7A0A0C4DH55 119 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 C10orf142B7Z368 130 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 K7EIM0 57 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 RPL35AP18077 110 aaKnown RBP3.2□□□□□ -1.9
VPS50-210ENST00000471188 TMEM200BQ69YZ2 307 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 GFRALQ6UXV0 394 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 SDIM1Q6ZPB5 146 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 SPTBN2O15020 2390 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 ASPMQ8IZT6 3477 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 TMEM223A0PJW6 202 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 TEX22C9J3V5 150 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 I3L3M4 83 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 COX7A1P24310 79 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 TMEM30BQ3MIR4 351 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 ZNF575Q86XF7 245 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 FAM19A4Q96LR4 140 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 OPRPNQ99935 248 aaPredicted RBP3.2□□□□□ -1.9
VPS50-210ENST00000471188 SPANXDQ9BXN6 97 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 DPH3P1Q9H4G8 78 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 PYGO1Q9Y3Y4 419 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 IGHV7-4-1A0A0J9YVY3 117 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 TINCRA0A1B0GVN0 87 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 LST1O00453 97 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 OXTP01178 125 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 LHBP01229 141 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 CRYGBP07316 175 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 SYNJ2BPP57105 145 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 C8orf31Q8N9H6 132 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 AGPAT4-IT1Q9H0P7 198 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 C19orf73Q9NVV2 129 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 SPRR3Q9UBC9 169 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 ZNF580Q9UK33 172 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 CSMD1Q96PZ7 3565 aa3.2□□□□□ -1.9
VPS50-210ENST00000471188 A0A0U1RRA0 63 aa3.19□□□□□ -1.9
VPS50-210ENST00000471188 M0R1W7 72 aa3.19□□□□□ -1.9
VPS50-210ENST00000471188 NDUFB3O43676 98 aa3.19□□□□□ -1.9
VPS50-210ENST00000471188 TSHBP01222 138 aa3.19□□□□□ -1.9
VPS50-210ENST00000471188 PFN2P35080 140 aa3.19□□□□□ -1.9
VPS50-210ENST00000471188 ZNF415Q09FC8 603 aa3.19□□□□□ -1.9
VPS50-210ENST00000471188 CCL17Q92583 94 aa3.19□□□□□ -1.9
VPS50-210ENST00000471188 RAI1Q7Z5J4 1906 aaPredicted RBP3.19□□□□□ -1.9
VPS50-210ENST00000471188 TACC2O95359 2948 aa3.19□□□□□ -1.9
VPS50-210ENST00000471188 ZZEF1O43149 2961 aa3.19□□□□□ -1.9
VPS50-210ENST00000471188 A0A0J9YXY3 114 aa3.19□□□□□ -1.9
VPS50-210ENST00000471188 EPOPA6NHQ4 379 aa3.19□□□□□ -1.9
VPS50-210ENST00000471188 LEPROTO15243 131 aa3.19□□□□□ -1.9
VPS50-210ENST00000471188 NDPQ00604 133 aa3.19□□□□□ -1.9
VPS50-210ENST00000471188 DAZ2Q13117 558 aaKnown RBP3.19□□□□□ -1.9
VPS50-210ENST00000471188 MRGPRG-AS1Q2M3A8 158 aa3.19□□□□□ -1.9
VPS50-210ENST00000471188 COX8CQ7Z4L0 72 aa3.19□□□□□ -1.9
VPS50-210ENST00000471188 DAZ4Q86SG3 579 aaKnown RBP3.19□□□□□ -1.9
VPS50-210ENST00000471188 DAND5Q8N907 189 aa3.19□□□□□ -1.9
VPS50-210ENST00000471188 DAZ1Q9NQZ3 744 aaKnown RBP3.19□□□□□ -1.9
VPS50-210ENST00000471188 DAZ3Q9NR90 486 aaKnown RBP3.19□□□□□ -1.9
VPS50-210ENST00000471188 CACNA1GO43497 2377 aa3.19□□□□□ -1.9
VPS50-210ENST00000471188 DMDP11532 3685 aa3.18□□□□□ -1.9
VPS50-210ENST00000471188 A0A087WVE0 104 aa3.18□□□□□ -1.9
VPS50-210ENST00000471188 A0A0J9YXV3 536 aa3.18□□□□□ -1.9
VPS50-210ENST00000471188 A0A0U1RQV1 116 aa3.18□□□□□ -1.9
VPS50-210ENST00000471188 NTN3O00634 580 aaPredicted RBP3.18□□□□□ -1.9
VPS50-210ENST00000471188 HIST1H4AP62805 103 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms