RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 MIFP14174 115 aa10.88□□□□□ -0.67
COL4A5-203ENST00000470339 C14orf178Q8N769 122 aaPredicted RBP10.88□□□□□ -0.67
COL4A5-203ENST00000470339 OR11H2Q8NH07 326 aa10.88□□□□□ -0.67
COL4A5-203ENST00000470339 MRAP2Q96G30 205 aa10.88□□□□□ -0.67
COL4A5-203ENST00000470339 CRYGDP07320 174 aa10.87□□□□□ -0.67
COL4A5-203ENST00000470339 LINC00315P59091 139 aa10.87□□□□□ -0.67
COL4A5-203ENST00000470339 Q0VG73 95 aa10.87□□□□□ -0.67
COL4A5-203ENST00000470339 ORMDL3Q8N138 153 aa10.87□□□□□ -0.67
COL4A5-203ENST00000470339 LAMTOR2Q9Y2Q5 125 aa10.87□□□□□ -0.67
COL4A5-203ENST00000470339 NACAE9PAV3 2078 aa10.87□□□□□ -0.67
COL4A5-203ENST00000470339 K7EIL1 84 aa10.86□□□□□ -0.67
COL4A5-203ENST00000470339 SRIP30626 198 aa10.86□□□□□ -0.67
COL4A5-203ENST00000470339 CKS2P33552 79 aa10.86□□□□□ -0.67
COL4A5-203ENST00000470339 OR10J3Q5JRS4 329 aa10.86□□□□□ -0.67
COL4A5-203ENST00000470339 NOP10Q9NPE3 64 aaKnown RBP10.86□□□□□ -0.67
COL4A5-203ENST00000470339 RHODO00212 210 aa10.85□□□□□ -0.67
COL4A5-203ENST00000470339 RS1O15537 224 aa10.85□□□□□ -0.67
COL4A5-203ENST00000470339 CIDEAO60543 219 aa10.85□□□□□ -0.67
COL4A5-203ENST00000470339 S100A6P06703 90 aa10.85□□□□□ -0.67
COL4A5-203ENST00000470339 COA6Q5JTJ3 125 aaKnown RBP10.85□□□□□ -0.67
COL4A5-203ENST00000470339 JPT2Q9H910 190 aa10.85□□□□□ -0.67
COL4A5-203ENST00000470339 MRPL16Q9NX20 251 aaKnown RBP10.85□□□□□ -0.67
COL4A5-203ENST00000470339 TRGV1A0A0A0MS02 117 aa10.84□□□□□ -0.67
COL4A5-203ENST00000470339 D6R8Y8 96 aa10.84□□□□□ -0.67
COL4A5-203ENST00000470339 PPP1R17O96001 155 aa10.84□□□□□ -0.67
COL4A5-203ENST00000470339 CFAP126Q5VTH2 177 aa10.84□□□□□ -0.67
COL4A5-203ENST00000470339 ZFP2Q6ZN57 461 aa10.84□□□□□ -0.67
COL4A5-203ENST00000470339 PRELID3AQ96N28 172 aa10.84□□□□□ -0.67
COL4A5-203ENST00000470339 A0A087WWL8 130 aa10.83□□□□□ -0.68
COL4A5-203ENST00000470339 LYRM9A8MSI8 78 aa10.83□□□□□ -0.68
COL4A5-203ENST00000470339 NDUFA6P56556 154 aa10.83□□□□□ -0.68
COL4A5-203ENST00000470339 UFSP1Q6NVU6 142 aa10.83□□□□□ -0.68
COL4A5-203ENST00000470339 Q6ZTI0 123 aa10.83□□□□□ -0.68
COL4A5-203ENST00000470339 LINC00612Q8N6U2 182 aa10.83□□□□□ -0.68
COL4A5-203ENST00000470339 Q8NAQ8 132 aa10.83□□□□□ -0.68
COL4A5-203ENST00000470339 C18orf32Q8TCD1 76 aa10.83□□□□□ -0.68
COL4A5-203ENST00000470339 C18orf15Q96N68 181 aa10.83□□□□□ -0.68
COL4A5-203ENST00000470339 SAMD10Q9BYL1 202 aa10.83□□□□□ -0.68
COL4A5-203ENST00000470339 TRAV4A0A0B4J268 109 aa10.82□□□□□ -0.68
COL4A5-203ENST00000470339 IGHV4-28A0A0C4DH34 117 aa10.82□□□□□ -0.68
COL4A5-203ENST00000470339 MGPP08493 103 aa10.82□□□□□ -0.68
COL4A5-203ENST00000470339 EDA2RQ9HAV5 297 aa10.82□□□□□ -0.68
COL4A5-203ENST00000470339 PRSS47A8MTI9 375 aa10.81□□□□□ -0.68
COL4A5-203ENST00000470339 PRB2P02812 416 aaPredicted RBP10.81□□□□□ -0.68
COL4A5-203ENST00000470339 DEFB121Q5J5C9 76 aa10.81□□□□□ -0.68
COL4A5-203ENST00000470339 FAM74A4Q5TZK3 123 aa10.81□□□□□ -0.68
COL4A5-203ENST00000470339 OR4C5Q8NGB2 326 aa10.81□□□□□ -0.68
COL4A5-203ENST00000470339 C5orf52A6NGY3 159 aa10.8□□□□□ -0.68
COL4A5-203ENST00000470339 F5H697 171 aa10.8□□□□□ -0.68
COL4A5-203ENST00000470339 SMKR1H3BMG3 65 aa10.8□□□□□ -0.68
COL4A5-203ENST00000470339 H7C1H1 209 aa10.8□□□□□ -0.68
COL4A5-203ENST00000470339 TNFRSF6BO95407 300 aa10.8□□□□□ -0.68
COL4A5-203ENST00000470339 SUMO4Q6EEV6 95 aa10.8□□□□□ -0.68
COL4A5-203ENST00000470339 BAGE3Q86Y29 109 aa10.8□□□□□ -0.68
COL4A5-203ENST00000470339 NRACQ8N912 160 aa10.8□□□□□ -0.68
COL4A5-203ENST00000470339 TRGV2A0A075B6R0 118 aa10.79□□□□□ -0.68
COL4A5-203ENST00000470339 TEX48A0A1B0GUV7 120 aa10.79□□□□□ -0.68
COL4A5-203ENST00000470339 GAGE12BA1L429 117 aa10.79□□□□□ -0.68
COL4A5-203ENST00000470339 GAGE7O76087 117 aa10.79□□□□□ -0.68
COL4A5-203ENST00000470339 NCR2O95944 276 aa10.79□□□□□ -0.68
COL4A5-203ENST00000470339 NPYP01303 97 aa10.79□□□□□ -0.68
COL4A5-203ENST00000470339 GAGE12FP0CL80 117 aa10.79□□□□□ -0.68
COL4A5-203ENST00000470339 GAGE12GP0CL81 117 aa10.79□□□□□ -0.68
COL4A5-203ENST00000470339 GAGE12IP0CL82 117 aa10.79□□□□□ -0.68
COL4A5-203ENST00000470339 HOXA5P20719 270 aa10.79□□□□□ -0.68
COL4A5-203ENST00000470339 EMP1P54849 157 aa10.79□□□□□ -0.68
COL4A5-203ENST00000470339 ZNF56Q15929 161 aa10.79□□□□□ -0.68
COL4A5-203ENST00000470339 SBSPONQ8IVN8 264 aa10.79□□□□□ -0.68
COL4A5-203ENST00000470339 C20orf78Q9BR46 151 aa10.79□□□□□ -0.68
COL4A5-203ENST00000470339 DKK2Q9UBU2 259 aa10.79□□□□□ -0.68
COL4A5-203ENST00000470339 TRAV26-2A0A0B4J265 109 aa10.78□□□□□ -0.68
COL4A5-203ENST00000470339 M0QY20 66 aa10.78□□□□□ -0.68
COL4A5-203ENST00000470339 IGHV3-53P01767 116 aa10.78□□□□□ -0.68
COL4A5-203ENST00000470339 ESDP10768 282 aa10.78□□□□□ -0.68
COL4A5-203ENST00000470339 SNRPEP62304 92 aaKnown RBP10.78□□□□□ -0.68
COL4A5-203ENST00000470339 SPATA25Q9BR10 227 aa10.78□□□□□ -0.68
COL4A5-203ENST00000470339 TM2D3Q9BRN9 247 aa10.78□□□□□ -0.68
COL4A5-203ENST00000470339 MAP1LC3AQ9H492 121 aa10.78□□□□□ -0.68
COL4A5-203ENST00000470339 TRBV6-5A0A0K0K1A5 114 aa10.77□□□□□ -0.69
COL4A5-203ENST00000470339 GAS8-AS1O95177 125 aa10.77□□□□□ -0.69
COL4A5-203ENST00000470339 SPART-AS1P0CW21 52 aa10.77□□□□□ -0.69
COL4A5-203ENST00000470339 GATA1P15976 413 aaPredicted RBP10.77□□□□□ -0.69
COL4A5-203ENST00000470339 RPL32P62910 135 aaKnown RBP10.77□□□□□ -0.69
COL4A5-203ENST00000470339 FAM222AQ5U5X8 452 aa10.77□□□□□ -0.69
COL4A5-203ENST00000470339 NIT1Q86X76 327 aa10.77□□□□□ -0.69
COL4A5-203ENST00000470339 CHCHD1Q96BP2 118 aaKnown RBP10.77□□□□□ -0.69
COL4A5-203ENST00000470339 C11orf68Q9H3H3 251 aaKnown RBP10.77□□□□□ -0.69
COL4A5-203ENST00000470339 SERF1AO75920 110 aa10.76□□□□□ -0.69
COL4A5-203ENST00000470339 LINC00614P0C842 121 aa10.76□□□□□ -0.69
COL4A5-203ENST00000470339 IQCJQ1A5X6 159 aa10.76□□□□□ -0.69
COL4A5-203ENST00000470339 PRSS3P2Q8NHM4 247 aa10.76□□□□□ -0.69
COL4A5-203ENST00000470339 ZNF479Q96JC4 524 aa10.76□□□□□ -0.69
COL4A5-203ENST00000470339 NXT2Q9NPJ8 142 aaKnown RBP10.76□□□□□ -0.69
COL4A5-203ENST00000470339 NIT2Q9NQR4 276 aa10.76□□□□□ -0.69
COL4A5-203ENST00000470339 IGHV3-73A0A0B4J1V6 119 aa10.75□□□□□ -0.69
COL4A5-203ENST00000470339 LINC01546A6NGU7 62 aa10.75□□□□□ -0.69
COL4A5-203ENST00000470339 SUMO2P61956 95 aaKnown RBP10.75□□□□□ -0.69
COL4A5-203ENST00000470339 RPL39LQ96EH5 51 aaKnown RBP10.75□□□□□ -0.69
COL4A5-203ENST00000470339 DNAJC30Q96LL9 226 aa10.75□□□□□ -0.69
COL4A5-203ENST00000470339 RETNQ9HD89 108 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms