RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 K7EP13 123 aa9.62□□□□□ -0.87
TOP3B-215ENST00000470338 OR5AL1P0C617 328 aa9.62□□□□□ -0.87
TOP3B-215ENST00000470338 DNAH10OSP0CZ25 163 aa9.62□□□□□ -0.87
TOP3B-215ENST00000470338 LINC00694P0DN24 101 aa9.62□□□□□ -0.87
TOP3B-215ENST00000470338 C14orf178Q8N769 122 aaPredicted RBP9.62□□□□□ -0.87
TOP3B-215ENST00000470338 LY96Q9Y6Y9 160 aa9.62□□□□□ -0.87
TOP3B-215ENST00000470338 TRAV9-2A0A087WT02 112 aa9.61□□□□□ -0.87
TOP3B-215ENST00000470338 A0A087WWL8 130 aa9.61□□□□□ -0.87
TOP3B-215ENST00000470338 LINC00315P59091 139 aa9.61□□□□□ -0.87
TOP3B-215ENST00000470338 OR10AG1Q8NH19 301 aa9.61□□□□□ -0.87
TOP3B-215ENST00000470338 ATP6V0E2Q8NHE4 81 aa9.61□□□□□ -0.87
TOP3B-215ENST00000470338 GTSF1LQ9H1H1 148 aa9.61□□□□□ -0.87
TOP3B-215ENST00000470338 Q9UF83 564 aa9.61□□□□□ -0.87
TOP3B-215ENST00000470338 RBFOX3A6NFN3 312 aa9.6□□□□□ -0.87
TOP3B-215ENST00000470338 FAM74A4Q5TZK3 123 aa9.6□□□□□ -0.87
TOP3B-215ENST00000470338 Q6ZRN7 208 aaPredicted RBP9.6□□□□□ -0.87
TOP3B-215ENST00000470338 DAZAP1Q96EP5 407 aaKnown RBP9.6□□□□□ -0.87
TOP3B-215ENST00000470338 GAGE12JA6NER3 117 aa9.59□□□□□ -0.87
TOP3B-215ENST00000470338 EVI2AP22794 236 aa9.59□□□□□ -0.87
TOP3B-215ENST00000470338 RPS20P60866 119 aaKnown RBP9.59□□□□□ -0.87
TOP3B-215ENST00000470338 GAGE1Q13065 139 aa9.59□□□□□ -0.87
TOP3B-215ENST00000470338 GAGE4Q13068 117 aa9.59□□□□□ -0.87
TOP3B-215ENST00000470338 GAGE5Q13069 117 aa9.59□□□□□ -0.87
TOP3B-215ENST00000470338 GAGE13Q4V321 117 aa9.59□□□□□ -0.87
TOP3B-215ENST00000470338 LELP1Q5T871 98 aa9.59□□□□□ -0.87
TOP3B-215ENST00000470338 BIN3Q9NQY0 253 aa9.59□□□□□ -0.87
TOP3B-215ENST00000470338 TRAV8-6A0A0B4J262 113 aa9.58□□□□□ -0.88
TOP3B-215ENST00000470338 IGHV3-38A0A0C4DH36 116 aa9.58□□□□□ -0.88
TOP3B-215ENST00000470338 TMEM250H0YL14 139 aa9.58□□□□□ -0.88
TOP3B-215ENST00000470338 IGLC6P0CF74 106 aa9.58□□□□□ -0.88
TOP3B-215ENST00000470338 OR2D3Q8NGH3 330 aa9.58□□□□□ -0.88
TOP3B-215ENST00000470338 TNFRSF18Q9Y5U5 241 aa9.58□□□□□ -0.88
TOP3B-215ENST00000470338 KIAA1109Q2LD37 5005 aa9.57□□□□□ -0.88
TOP3B-215ENST00000470338 MUC21A0A0G2JKD1 596 aa9.57□□□□□ -0.88
TOP3B-215ENST00000470338 TRBV10-1A0A0K0K1A3 114 aa9.57□□□□□ -0.88
TOP3B-215ENST00000470338 MUC21A0A140T8X8 626 aa9.57□□□□□ -0.88
TOP3B-215ENST00000470338 P01737 135 aa9.57□□□□□ -0.88
TOP3B-215ENST00000470338 GZMBP10144 247 aa9.57□□□□□ -0.88
TOP3B-215ENST00000470338 RAB4BP61018 213 aa9.57□□□□□ -0.88
TOP3B-215ENST00000470338 LINC01556Q5JQF7 62 aa9.57□□□□□ -0.88
TOP3B-215ENST00000470338 OR10J3Q5JRS4 329 aa9.57□□□□□ -0.88
TOP3B-215ENST00000470338 SPANXN1Q5VSR9 72 aa9.57□□□□□ -0.88
TOP3B-215ENST00000470338 OCC1Q8TAD7 63 aa9.57□□□□□ -0.88
TOP3B-215ENST00000470338 NDUFS6O75380 124 aaKnown RBP9.56□□□□□ -0.88
TOP3B-215ENST00000470338 NFE4Q86UQ8 179 aa9.56□□□□□ -0.88
TOP3B-215ENST00000470338 C10orf126Q8N4M7 172 aa9.56□□□□□ -0.88
TOP3B-215ENST00000470338 NUDT10Q8NFP7 164 aa9.56□□□□□ -0.88
TOP3B-215ENST00000470338 NUDT11Q96G61 164 aa9.56□□□□□ -0.88
TOP3B-215ENST00000470338 MSRB1Q9NZV6 116 aa9.56□□□□□ -0.88
TOP3B-215ENST00000470338 KIF25-AS1Q9Y6Z4 181 aa9.56□□□□□ -0.88
TOP3B-215ENST00000470338 XKRY2A2RUG3 117 aa9.55□□□□□ -0.88
TOP3B-215ENST00000470338 K7EN84 100 aa9.55□□□□□ -0.88
TOP3B-215ENST00000470338 FER1L6-AS1Q8NA97 138 aa9.55□□□□□ -0.88
TOP3B-215ENST00000470338 OR10G8Q8NGN5 311 aa9.55□□□□□ -0.88
TOP3B-215ENST00000470338 HERC2O95714 4834 aa9.55□□□□□ -0.88
TOP3B-215ENST00000470338 A0A087WWC5 75 aa9.54□□□□□ -0.88
TOP3B-215ENST00000470338 F2Z2F3 143 aa9.54□□□□□ -0.88
TOP3B-215ENST00000470338 SSTP61278 116 aa9.54□□□□□ -0.88
TOP3B-215ENST00000470338 TOR2AQ5JU69 321 aa9.54□□□□□ -0.88
TOP3B-215ENST00000470338 FAM210AQ96ND0 272 aa9.54□□□□□ -0.88
TOP3B-215ENST00000470338 TRBV7-3A0A075B6L6 115 aa9.53□□□□□ -0.88
TOP3B-215ENST00000470338 IBA57-AS1B1ANH7 110 aa9.53□□□□□ -0.88
TOP3B-215ENST00000470338 UBE2D3P61077 147 aa9.53□□□□□ -0.88
TOP3B-215ENST00000470338 UBE2D2P62837 147 aa9.53□□□□□ -0.88
TOP3B-215ENST00000470338 CACNG7P62955 275 aa9.53□□□□□ -0.88
TOP3B-215ENST00000470338 RPL36AP83881 106 aaKnown RBP9.53□□□□□ -0.88
TOP3B-215ENST00000470338 ZNF56Q15929 161 aa9.53□□□□□ -0.88
TOP3B-215ENST00000470338 RPL36ALQ969Q0 106 aaKnown RBP9.53□□□□□ -0.88
TOP3B-215ENST00000470338 AP1S3Q96PC3 154 aa9.53□□□□□ -0.88
TOP3B-215ENST00000470338 TPPP3Q9BW30 176 aa9.53□□□□□ -0.88
TOP3B-215ENST00000470338 EIF5A2Q9GZV4 153 aaKnown RBP9.53□□□□□ -0.88
TOP3B-215ENST00000470338 SMIM17P0DL12 118 aa9.52□□□□□ -0.89
TOP3B-215ENST00000470338 WDR73Q6P4I2 378 aa9.52□□□□□ -0.89
TOP3B-215ENST00000470338 LYZL1Q6UWQ5 148 aa9.52□□□□□ -0.89
TOP3B-215ENST00000470338 NEXN-AS1Q8NBZ9 246 aa9.52□□□□□ -0.89
TOP3B-215ENST00000470338 RNASE7Q9H1E1 156 aaKnown RBP9.52□□□□□ -0.89
TOP3B-215ENST00000470338 RPP21Q9H633 154 aaKnown RBP9.52□□□□□ -0.89
TOP3B-215ENST00000470338 LRP1BQ9NZR2 4599 aa9.51□□□□□ -0.89
TOP3B-215ENST00000470338 DNAH5Q8TE73 4624 aa9.51□□□□□ -0.89
TOP3B-215ENST00000470338 F5H697 171 aa9.51□□□□□ -0.89
TOP3B-215ENST00000470338 IGHV3-30P01768 117 aa9.51□□□□□ -0.89
TOP3B-215ENST00000470338 IGHV3-33P01772 117 aa9.51□□□□□ -0.89
TOP3B-215ENST00000470338 IGHV3-30-3P0DP02 117 aa9.51□□□□□ -0.89
TOP3B-215ENST00000470338 IGHV3-30-5P0DP03 117 aa9.51□□□□□ -0.89
TOP3B-215ENST00000470338 CTRLP40313 264 aa9.51□□□□□ -0.89
TOP3B-215ENST00000470338 TEX261Q6UWH6 196 aa9.51□□□□□ -0.89
TOP3B-215ENST00000470338 FAM231DQ6ZW35 169 aa9.51□□□□□ -0.89
TOP3B-215ENST00000470338 SPATA12Q7Z6I5 190 aa9.51□□□□□ -0.89
TOP3B-215ENST00000470338 C16orf90A8MZG2 172 aa9.5□□□□□ -0.89
TOP3B-215ENST00000470338 SRP19P09132 144 aaKnown RBP9.5□□□□□ -0.89
TOP3B-215ENST00000470338 NTF3P20783 257 aa9.5□□□□□ -0.89
TOP3B-215ENST00000470338 KRTAP10-2P60368 255 aa9.5□□□□□ -0.89
TOP3B-215ENST00000470338 CNFNQ9BYD5 112 aa9.5□□□□□ -0.89
TOP3B-215ENST00000470338 CEBPGP53567 150 aa9.49□□□□□ -0.89
TOP3B-215ENST00000470338 ERVFC1-1P60608 527 aa9.49□□□□□ -0.89
TOP3B-215ENST00000470338 LAGE3Q14657 143 aa9.49□□□□□ -0.89
TOP3B-215ENST00000470338 Q8N3U1 123 aa9.49□□□□□ -0.89
TOP3B-215ENST00000470338 SMIM7Q9BQ49 75 aa9.49□□□□□ -0.89
TOP3B-215ENST00000470338 M0QY20 66 aa9.48□□□□□ -0.89
TOP3B-215ENST00000470338 GATCO43716 136 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms