RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 TRBV7-3A0A075B6L6 115 aa12.04□□□□□ -0.48
NCKIPSD-209ENST00000470006 A0A087WYN8 130 aa12.04□□□□□ -0.48
NCKIPSD-209ENST00000470006 PHOX2AO14813 284 aa12.04□□□□□ -0.48
NCKIPSD-209ENST00000470006 SAPCD1Q5SSQ6 148 aa12.04□□□□□ -0.48
NCKIPSD-209ENST00000470006 IL36BQ9NZH7 164 aa12.04□□□□□ -0.48
NCKIPSD-209ENST00000470006 IGHV3-64A0A075B6Q5 118 aa12.03□□□□□ -0.48
NCKIPSD-209ENST00000470006 TRBV6-8A0A0A6YYG3 113 aa12.03□□□□□ -0.48
NCKIPSD-209ENST00000470006 hDV102S1A0JD36 115 aa12.03□□□□□ -0.48
NCKIPSD-209ENST00000470006 CHTF8P0CG12 524 aa12.03□□□□□ -0.48
NCKIPSD-209ENST00000470006 UBE2D3P61077 147 aa12.03□□□□□ -0.48
NCKIPSD-209ENST00000470006 UBE2D2P62837 147 aa12.03□□□□□ -0.48
NCKIPSD-209ENST00000470006 CLRN3Q8NCR9 226 aa12.03□□□□□ -0.48
NCKIPSD-209ENST00000470006 TRBV10-1A0A0K0K1A3 114 aa12.02□□□□□ -0.49
NCKIPSD-209ENST00000470006 FABP5P3A8MUU1 101 aa12.02□□□□□ -0.49
NCKIPSD-209ENST00000470006 B4DEV8 164 aa12.02□□□□□ -0.49
NCKIPSD-209ENST00000470006 ARMS2P0C7Q2 107 aa12.02□□□□□ -0.49
NCKIPSD-209ENST00000470006 ARL14EPLP0DKL9 152 aa12.02□□□□□ -0.49
NCKIPSD-209ENST00000470006 RAB2AP61019 212 aa12.02□□□□□ -0.49
NCKIPSD-209ENST00000470006 RNF185Q96GF1 192 aa12.02□□□□□ -0.49
NCKIPSD-209ENST00000470006 PHLDA3Q9Y5J5 127 aa12.02□□□□□ -0.49
NCKIPSD-209ENST00000470006 H0YIZ8 118 aa12.01□□□□□ -0.49
NCKIPSD-209ENST00000470006 PTTG1O95997 202 aa12.01□□□□□ -0.49
NCKIPSD-209ENST00000470006 PKIAP61925 76 aa12.01□□□□□ -0.49
NCKIPSD-209ENST00000470006 SUMO1P63165 101 aaKnown RBP12.01□□□□□ -0.49
NCKIPSD-209ENST00000470006 CIRBPQ14011 172 aaKnown RBP12.01□□□□□ -0.49
NCKIPSD-209ENST00000470006 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.01□□□□□ -0.49
NCKIPSD-209ENST00000470006 GTSF1Q8WW33 167 aa12.01□□□□□ -0.49
NCKIPSD-209ENST00000470006 AP5S1Q9NUS5 200 aa12.01□□□□□ -0.49
NCKIPSD-209ENST00000470006 KIF25-AS1Q9Y6Z4 181 aa12.01□□□□□ -0.49
NCKIPSD-209ENST00000470006 GRIFINA4D1Z8 144 aa12□□□□□ -0.49
NCKIPSD-209ENST00000470006 M0R381 172 aa12□□□□□ -0.49
NCKIPSD-209ENST00000470006 SFRP2Q96HF1 295 aa12□□□□□ -0.49
NCKIPSD-209ENST00000470006 EPDR1Q9UM22 224 aa12□□□□□ -0.49
NCKIPSD-209ENST00000470006 HSPB11Q9Y547 144 aa12□□□□□ -0.49
NCKIPSD-209ENST00000470006 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.99□□□□□ -0.49
NCKIPSD-209ENST00000470006 M0R036 132 aa11.99□□□□□ -0.49
NCKIPSD-209ENST00000470006 LINC00269Q8N2A0 174 aa11.99□□□□□ -0.49
NCKIPSD-209ENST00000470006 TRAV34A0A0B4J273 112 aa11.98□□□□□ -0.49
NCKIPSD-209ENST00000470006 FAM240BA0A1B0GVZ2 78 aa11.98□□□□□ -0.49
NCKIPSD-209ENST00000470006 TPT1P13693 172 aaKnown RBP11.98□□□□□ -0.49
NCKIPSD-209ENST00000470006 CNBPP62633 177 aaKnown RBP11.98□□□□□ -0.49
NCKIPSD-209ENST00000470006 WDR73Q6P4I2 378 aa11.98□□□□□ -0.49
NCKIPSD-209ENST00000470006 SPACA4Q8TDM5 124 aa11.98□□□□□ -0.49
NCKIPSD-209ENST00000470006 IGLV10-54A0A075B6I4 117 aa11.97□□□□□ -0.49
NCKIPSD-209ENST00000470006 A0A0J9YXV3 536 aa11.97□□□□□ -0.49
NCKIPSD-209ENST00000470006 CDC34P49427 236 aaPredicted RBP11.97□□□□□ -0.49
NCKIPSD-209ENST00000470006 CYCSP99999 105 aaKnown RBP11.97□□□□□ -0.49
NCKIPSD-209ENST00000470006 GAGE6Q13070 117 aa11.96□□□□□ -0.49
NCKIPSD-209ENST00000470006 RBM38Q9H0Z9 239 aaKnown RBP11.96□□□□□ -0.49
NCKIPSD-209ENST00000470006 ARL2-SNX15V9GYD0 113 aa11.96□□□□□ -0.49
NCKIPSD-209ENST00000470006 KRBOX1C9JBD0 128 aa11.95□□□□□ -0.5
NCKIPSD-209ENST00000470006 GCHFRP30047 84 aa11.95□□□□□ -0.5
NCKIPSD-209ENST00000470006 RPL12P30050 165 aaKnown RBP11.95□□□□□ -0.5
NCKIPSD-209ENST00000470006 RBX1P62877 108 aa11.95□□□□□ -0.5
NCKIPSD-209ENST00000470006 KRTAP26-1Q6PEX3 210 aa11.95□□□□□ -0.5
NCKIPSD-209ENST00000470006 REG3GQ6UW15 175 aa11.95□□□□□ -0.5
NCKIPSD-209ENST00000470006 PRR34Q9NV39 138 aa11.95□□□□□ -0.5
NCKIPSD-209ENST00000470006 PLAC8Q9NZF1 115 aa11.95□□□□□ -0.5
NCKIPSD-209ENST00000470006 TMSB15BA0A087X1C1 80 aa11.94□□□□□ -0.5
NCKIPSD-209ENST00000470006 STAG3L2P0CL84 134 aa11.94□□□□□ -0.5
NCKIPSD-209ENST00000470006 STAG3L3P0CL85 134 aa11.94□□□□□ -0.5
NCKIPSD-209ENST00000470006 ZNF56Q15929 161 aa11.94□□□□□ -0.5
NCKIPSD-209ENST00000470006 ZFP82Q8N141 532 aa11.94□□□□□ -0.5
NCKIPSD-209ENST00000470006 NEXN-AS1Q8NBZ9 246 aa11.94□□□□□ -0.5
NCKIPSD-209ENST00000470006 OR10G8Q8NGN5 311 aa11.94□□□□□ -0.5
NCKIPSD-209ENST00000470006 PPP1R1CQ8WVI7 109 aa11.94□□□□□ -0.5
NCKIPSD-209ENST00000470006 KRTAP10-8P60410 259 aa11.93□□□□□ -0.5
NCKIPSD-209ENST00000470006 PRR3P79522 188 aaKnown RBP11.93□□□□□ -0.5
NCKIPSD-209ENST00000470006 DNLZQ5SXM8 178 aa11.93□□□□□ -0.5
NCKIPSD-209ENST00000470006 LYPD6BQ8NI32 183 aa11.93□□□□□ -0.5
NCKIPSD-209ENST00000470006 IFNA7P01567 189 aa11.92□□□□□ -0.5
NCKIPSD-209ENST00000470006 RAB5CP51148 216 aa11.92□□□□□ -0.5
NCKIPSD-209ENST00000470006 RAB4BP61018 213 aa11.92□□□□□ -0.5
NCKIPSD-209ENST00000470006 MAJINQ3KP22 176 aa11.92□□□□□ -0.5
NCKIPSD-209ENST00000470006 RAB24Q969Q5 203 aa11.92□□□□□ -0.5
NCKIPSD-209ENST00000470006 WFDC1Q9HC57 220 aa11.92□□□□□ -0.5
NCKIPSD-209ENST00000470006 TMEM167BQ9NRX6 74 aa11.92□□□□□ -0.5
NCKIPSD-209ENST00000470006 SH2D1AO60880 128 aa11.91□□□□□ -0.5
NCKIPSD-209ENST00000470006 SLPIP03973 132 aa11.91□□□□□ -0.5
NCKIPSD-209ENST00000470006 PET100P0DJ07 73 aa11.91□□□□□ -0.5
NCKIPSD-209ENST00000470006 REG3AQ06141 175 aa11.91□□□□□ -0.5
NCKIPSD-209ENST00000470006 TMEM97Q5BJF2 176 aa11.91□□□□□ -0.5
NCKIPSD-209ENST00000470006 IGKV2-24A0A0C4DH68 120 aa11.9□□□□□ -0.5
NCKIPSD-209ENST00000470006 COX6A2Q02221 97 aa11.9□□□□□ -0.5
NCKIPSD-209ENST00000470006 MZT2BQ6NZ67 158 aa11.9□□□□□ -0.5
NCKIPSD-209ENST00000470006 SUN5Q8TC36 379 aa11.9□□□□□ -0.5
NCKIPSD-209ENST00000470006 DERL1Q9BUN8 251 aa11.9□□□□□ -0.5
NCKIPSD-209ENST00000470006 TRBV25-1A0A075B6N4 114 aa11.89□□□□□ -0.51
NCKIPSD-209ENST00000470006 F5H697 171 aa11.89□□□□□ -0.51
NCKIPSD-209ENST00000470006 MPC2O95563 127 aa11.89□□□□□ -0.51
NCKIPSD-209ENST00000470006 CXorf1O96002 111 aa11.89□□□□□ -0.51
NCKIPSD-209ENST00000470006 CRIP1P50238 77 aa11.89□□□□□ -0.51
NCKIPSD-209ENST00000470006 FAM162BQ5T6X4 162 aa11.89□□□□□ -0.51
NCKIPSD-209ENST00000470006 SPINK6Q6UWN8 80 aa11.89□□□□□ -0.51
NCKIPSD-209ENST00000470006 NTM-AS1Q6ZSK4 140 aa11.89□□□□□ -0.51
NCKIPSD-209ENST00000470006 Q86TA4 180 aa11.88□□□□□ -0.51
NCKIPSD-209ENST00000470006 STPG4Q8N801 248 aa11.88□□□□□ -0.51
NCKIPSD-209ENST00000470006 TRAV8-4A0A0B4J246 113 aa11.87□□□□□ -0.51
NCKIPSD-209ENST00000470006 P01737 135 aa11.87□□□□□ -0.51
NCKIPSD-209ENST00000470006 H2BFSP57053 126 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms