RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 HSPB11Q9Y547 144 aa11.61□□□□□ -0.55
TTC28-205ENST00000469670 A0A087WWL8 130 aa11.6□□□□□ -0.55
TTC28-205ENST00000469670 ARL14EPLP0DKL9 152 aa11.6□□□□□ -0.55
TTC28-205ENST00000469670 RAB2AP61019 212 aa11.6□□□□□ -0.55
TTC28-205ENST00000469670 ODF1Q14990 250 aa11.6□□□□□ -0.55
TTC28-205ENST00000469670 MIAQ16674 131 aa11.6□□□□□ -0.55
TTC28-205ENST00000469670 TRBV7-3A0A075B6L6 115 aa11.59□□□□□ -0.55
TTC28-205ENST00000469670 TRBV6-8A0A0A6YYG3 113 aa11.59□□□□□ -0.55
TTC28-205ENST00000469670 TRBV10-1A0A0K0K1A3 114 aa11.59□□□□□ -0.55
TTC28-205ENST00000469670 OR11H4Q8NGC9 324 aa11.59□□□□□ -0.55
TTC28-205ENST00000469670 LINC01600Q96MT4 127 aa11.59□□□□□ -0.55
TTC28-205ENST00000469670 FABP5P3A8MUU1 101 aa11.58□□□□□ -0.56
TTC28-205ENST00000469670 ARMS2P0C7Q2 107 aa11.58□□□□□ -0.56
TTC28-205ENST00000469670 DPH3Q96FX2 82 aa11.58□□□□□ -0.56
TTC28-205ENST00000469670 SFRP2Q96HF1 295 aa11.58□□□□□ -0.56
TTC28-205ENST00000469670 EPDR1Q9UM22 224 aa11.58□□□□□ -0.56
TTC28-205ENST00000469670 FAM240BA0A1B0GVZ2 78 aa11.57□□□□□ -0.56
TTC28-205ENST00000469670 B4DEV8 164 aa11.57□□□□□ -0.56
TTC28-205ENST00000469670 SUMO1P63165 101 aaKnown RBP11.57□□□□□ -0.56
TTC28-205ENST00000469670 CYCSP99999 105 aaKnown RBP11.57□□□□□ -0.56
TTC28-205ENST00000469670 RNF185Q96GF1 192 aa11.57□□□□□ -0.56
TTC28-205ENST00000469670 A0A087WYN8 130 aa11.56□□□□□ -0.56
TTC28-205ENST00000469670 STAG3L2P0CL84 134 aa11.56□□□□□ -0.56
TTC28-205ENST00000469670 STAG3L3P0CL85 134 aa11.56□□□□□ -0.56
TTC28-205ENST00000469670 KRTAP26-1Q6PEX3 210 aa11.56□□□□□ -0.56
TTC28-205ENST00000469670 CLRN3Q8NCR9 226 aa11.56□□□□□ -0.56
TTC28-205ENST00000469670 SUN5Q8TC36 379 aa11.56□□□□□ -0.56
TTC28-205ENST00000469670 GAS8-AS1O95177 125 aa11.55□□□□□ -0.56
TTC28-205ENST00000469670 RPL12P30050 165 aaKnown RBP11.55□□□□□ -0.56
TTC28-205ENST00000469670 CDC34P49427 236 aaPredicted RBP11.55□□□□□ -0.56
TTC28-205ENST00000469670 CNBPP62633 177 aaKnown RBP11.55□□□□□ -0.56
TTC28-205ENST00000469670 DNLZQ5SXM8 178 aa11.55□□□□□ -0.56
TTC28-205ENST00000469670 OR10G8Q8NGN5 311 aa11.55□□□□□ -0.56
TTC28-205ENST00000469670 PPP1R1CQ8WVI7 109 aa11.55□□□□□ -0.56
TTC28-205ENST00000469670 CHCHD5Q9BSY4 110 aa11.55□□□□□ -0.56
TTC28-205ENST00000469670 WFDC1Q9HC57 220 aa11.55□□□□□ -0.56
TTC28-205ENST00000469670 TRAV34A0A0B4J273 112 aa11.54□□□□□ -0.56
TTC28-205ENST00000469670 GRIFINA4D1Z8 144 aa11.54□□□□□ -0.56
TTC28-205ENST00000469670 KRBOX1C9JBD0 128 aa11.54□□□□□ -0.56
TTC28-205ENST00000469670 PHOX2AO14813 284 aa11.54□□□□□ -0.56
TTC28-205ENST00000469670 PTTG1O95997 202 aa11.54□□□□□ -0.56
TTC28-205ENST00000469670 CHTF8P0CG12 524 aa11.54□□□□□ -0.56
TTC28-205ENST00000469670 GCHFRP30047 84 aa11.54□□□□□ -0.56
TTC28-205ENST00000469670 PKIAP61925 76 aa11.54□□□□□ -0.56
TTC28-205ENST00000469670 CLPSL2Q6UWE3 100 aa11.54□□□□□ -0.56
TTC28-205ENST00000469670 PRR34Q9NV39 138 aa11.54□□□□□ -0.56
TTC28-205ENST00000469670 PHLDA3Q9Y5J5 127 aa11.54□□□□□ -0.56
TTC28-205ENST00000469670 ARL2-SNX15V9GYD0 113 aa11.54□□□□□ -0.56
TTC28-205ENST00000469670 IGHV3-64A0A075B6Q5 118 aa11.53□□□□□ -0.56
TTC28-205ENST00000469670 M0R036 132 aa11.53□□□□□ -0.56
TTC28-205ENST00000469670 M0R381 172 aa11.53□□□□□ -0.56
TTC28-205ENST00000469670 SPACA4Q8TDM5 124 aa11.53□□□□□ -0.56
TTC28-205ENST00000469670 hDV102S1A0JD36 115 aa11.52□□□□□ -0.57
TTC28-205ENST00000469670 TPT1P13693 172 aaKnown RBP11.52□□□□□ -0.57
TTC28-205ENST00000469670 LINC00269Q8N2A0 174 aa11.52□□□□□ -0.57
TTC28-205ENST00000469670 C7orf33Q8WU49 177 aa11.52□□□□□ -0.57
TTC28-205ENST00000469670 KIF25-AS1Q9Y6Z4 181 aa11.52□□□□□ -0.57
TTC28-205ENST00000469670 MPC2O95563 127 aa11.51□□□□□ -0.57
TTC28-205ENST00000469670 H2BFSP57053 126 aa11.51□□□□□ -0.57
TTC28-205ENST00000469670 NEXN-AS1Q8NBZ9 246 aa11.51□□□□□ -0.57
TTC28-205ENST00000469670 RAB24Q969Q5 203 aa11.51□□□□□ -0.57
TTC28-205ENST00000469670 PLAC8Q9NZF1 115 aa11.51□□□□□ -0.57
TTC28-205ENST00000469670 A0A0J9YXV3 536 aa11.5□□□□□ -0.57
TTC28-205ENST00000469670 PET100P0DJ07 73 aa11.5□□□□□ -0.57
TTC28-205ENST00000469670 CRIP1P50238 77 aa11.5□□□□□ -0.57
TTC28-205ENST00000469670 RBX1P62877 108 aa11.5□□□□□ -0.57
TTC28-205ENST00000469670 MZT2BQ6NZ67 158 aa11.5□□□□□ -0.57
TTC28-205ENST00000469670 ZFP82Q8N141 532 aa11.5□□□□□ -0.57
TTC28-205ENST00000469670 TMEM167BQ9NRX6 74 aa11.5□□□□□ -0.57
TTC28-205ENST00000469670 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.49□□□□□ -0.57
TTC28-205ENST00000469670 WDR73Q6P4I2 378 aa11.49□□□□□ -0.57
TTC28-205ENST00000469670 Q86TA4 180 aa11.49□□□□□ -0.57
TTC28-205ENST00000469670 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.49□□□□□ -0.57
TTC28-205ENST00000469670 CCDC32Q9BV29 185 aa11.49□□□□□ -0.57
TTC28-205ENST00000469670 AP5S1Q9NUS5 200 aa11.49□□□□□ -0.57
TTC28-205ENST00000469670 IGLV10-54A0A075B6I4 117 aa11.48□□□□□ -0.57
TTC28-205ENST00000469670 SH2D1AO60880 128 aa11.48□□□□□ -0.57
TTC28-205ENST00000469670 SLPIP03973 132 aa11.48□□□□□ -0.57
TTC28-205ENST00000469670 KRTAP10-8P60410 259 aa11.48□□□□□ -0.57
TTC28-205ENST00000469670 RAB4BP61018 213 aa11.48□□□□□ -0.57
TTC28-205ENST00000469670 GAGE6Q13070 117 aa11.48□□□□□ -0.57
TTC28-205ENST00000469670 NTM-AS1Q6ZSK4 140 aa11.48□□□□□ -0.57
TTC28-205ENST00000469670 TMSB15BA0A087X1C1 80 aa11.47□□□□□ -0.57
TTC28-205ENST00000469670 CXorf1O96002 111 aa11.47□□□□□ -0.57
TTC28-205ENST00000469670 ZNF56Q15929 161 aa11.47□□□□□ -0.57
TTC28-205ENST00000469670 PRR27Q6MZM9 219 aa11.47□□□□□ -0.57
TTC28-205ENST00000469670 A0A1W2PRE2 83 aa11.46□□□□□ -0.57
TTC28-205ENST00000469670 IFNA7P01567 189 aa11.46□□□□□ -0.57
TTC28-205ENST00000469670 PRR3P79522 188 aaKnown RBP11.46□□□□□ -0.57
TTC28-205ENST00000469670 TMEM97Q5BJF2 176 aa11.46□□□□□ -0.57
TTC28-205ENST00000469670 LINC00299Q6ZSB3 139 aa11.46□□□□□ -0.57
TTC28-205ENST00000469670 GTSF1Q8WW33 167 aa11.46□□□□□ -0.57
TTC28-205ENST00000469670 REG3AQ06141 175 aa11.45□□□□□ -0.58
TTC28-205ENST00000469670 FAM162BQ5T6X4 162 aa11.45□□□□□ -0.58
TTC28-205ENST00000469670 PEX7O00628 323 aa11.44□□□□□ -0.58
TTC28-205ENST00000469670 LINC01559Q495D7 138 aa11.44□□□□□ -0.58
TTC28-205ENST00000469670 COX8CQ7Z4L0 72 aa11.44□□□□□ -0.58
TTC28-205ENST00000469670 ENKURQ8TC29 256 aa11.44□□□□□ -0.58
TTC28-205ENST00000469670 TRBV25-1A0A075B6N4 114 aa11.43□□□□□ -0.58
TTC28-205ENST00000469670 MBP02144 154 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms