RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 TRBV7-3A0A075B6L6 115 aa7.71□□□□□ -1.17
NUP50-214ENST00000469163 J3QQQ9 107 aa7.71□□□□□ -1.17
NUP50-214ENST00000469163 MRPS12O15235 138 aaKnown RBP7.71□□□□□ -1.17
NUP50-214ENST00000469163 SAA1P0DJI8 122 aaPredicted RBP7.71□□□□□ -1.17
NUP50-214ENST00000469163 PSMG4Q5JS54 123 aa7.71□□□□□ -1.17
NUP50-214ENST00000469163 ZNF785A8K8V0 405 aa7.71□□□□□ -1.18
NUP50-214ENST00000469163 NDUFA3O95167 84 aa7.71□□□□□ -1.18
NUP50-214ENST00000469163 IGHV3-11P01762 117 aa7.71□□□□□ -1.18
NUP50-214ENST00000469163 NSUN5P1Q3KNT7 163 aa7.71□□□□□ -1.18
NUP50-214ENST00000469163 SRRM4A7MD48 611 aaKnown RBP7.7□□□□□ -1.18
NUP50-214ENST00000469163 C8orf31Q8N9H6 132 aa7.7□□□□□ -1.18
NUP50-214ENST00000469163 BRK1Q8WUW1 75 aa7.7□□□□□ -1.18
NUP50-214ENST00000469163 BEX4Q9NWD9 120 aaPredicted RBP7.7□□□□□ -1.18
NUP50-214ENST00000469163 A0A1B0GUT8 65 aa7.7□□□□□ -1.18
NUP50-214ENST00000469163 ARMS2P0C7Q2 107 aa7.7□□□□□ -1.18
NUP50-214ENST00000469163 DTX2Q86UW9 622 aa7.7□□□□□ -1.18
NUP50-214ENST00000469163 MGAM2Q2M2H8 2515 aa7.7□□□□□ -1.18
NUP50-214ENST00000469163 LHBP01229 141 aa7.7□□□□□ -1.18
NUP50-214ENST00000469163 Q1RN00 199 aa7.7□□□□□ -1.18
NUP50-214ENST00000469163 SBSPONQ8IVN8 264 aa7.7□□□□□ -1.18
NUP50-214ENST00000469163 SMR3AQ99954 134 aa7.7□□□□□ -1.18
NUP50-214ENST00000469163 PROP1O75360 226 aa7.69□□□□□ -1.18
NUP50-214ENST00000469163 SAA4P35542 130 aa7.69□□□□□ -1.18
NUP50-214ENST00000469163 TMEM258P61165 79 aa7.69□□□□□ -1.18
NUP50-214ENST00000469163 LINC00322Q6ZN03 302 aaPredicted RBP7.69□□□□□ -1.18
NUP50-214ENST00000469163 GOLT1AQ6ZVE7 132 aa7.69□□□□□ -1.18
NUP50-214ENST00000469163 RIGQ13278 110 aa7.69□□□□□ -1.18
NUP50-214ENST00000469163 VMA21Q3ZAQ7 101 aa7.69□□□□□ -1.18
NUP50-214ENST00000469163 SLC25A2Q9BXI2 301 aa7.69□□□□□ -1.18
NUP50-214ENST00000469163 NBEAL1Q6ZS30 2694 aa7.69□□□□□ -1.18
NUP50-214ENST00000469163 WI2-2373I1.2A0A1W2PRP0 233 aa7.69□□□□□ -1.18
NUP50-214ENST00000469163 LOXL3P58215 753 aa7.69□□□□□ -1.18
NUP50-214ENST00000469163 LGALS9O00182 355 aa7.68□□□□□ -1.18
NUP50-214ENST00000469163 LGALS1P09382 135 aaKnown RBP7.68□□□□□ -1.18
NUP50-214ENST00000469163 IGHV4-38-2P0DP08 117 aa7.68□□□□□ -1.18
NUP50-214ENST00000469163 PYYP10082 97 aa7.68□□□□□ -1.18
NUP50-214ENST00000469163 H7C1H1 209 aa7.68□□□□□ -1.18
NUP50-214ENST00000469163 NBR2O15453 112 aa7.68□□□□□ -1.18
NUP50-214ENST00000469163 ZNF22P17026 224 aaPredicted RBP7.68□□□□□ -1.18
NUP50-214ENST00000469163 CYSTM1Q9H1C7 97 aa7.68□□□□□ -1.18
NUP50-214ENST00000469163 DPM3Q9P2X0 92 aa7.68□□□□□ -1.18
NUP50-214ENST00000469163 RAI1Q7Z5J4 1906 aaPredicted RBP7.68□□□□□ -1.18
NUP50-214ENST00000469163 MXRA5Q9NR99 2828 aa7.68□□□□□ -1.18
NUP50-214ENST00000469163 TRBV7-7A0A0K0K1E9 115 aa7.68□□□□□ -1.18
NUP50-214ENST00000469163 INS-IGF2F8WCM5 200 aa7.68□□□□□ -1.18
NUP50-214ENST00000469163 SMKR1H3BMG3 65 aa7.68□□□□□ -1.18
NUP50-214ENST00000469163 ERHP84090 104 aaKnown RBP7.68□□□□□ -1.18
NUP50-214ENST00000469163 MRPL35Q9NZE8 188 aaKnown RBP7.68□□□□□ -1.18
NUP50-214ENST00000469163 STAB1Q9NY15 2570 aa7.67□□□□□ -1.18
NUP50-214ENST00000469163 PGPA6NDG6 321 aa7.67□□□□□ -1.18
NUP50-214ENST00000469163 H3BUX3 64 aa7.67□□□□□ -1.18
NUP50-214ENST00000469163 RPL13AP40429 203 aaKnown RBP7.67□□□□□ -1.18
NUP50-214ENST00000469163 LEPP41159 167 aa7.67□□□□□ -1.18
NUP50-214ENST00000469163 PIFOQ8TCI5 191 aa7.67□□□□□ -1.18
NUP50-214ENST00000469163 IGLV2-14P01704 120 aa7.67□□□□□ -1.18
NUP50-214ENST00000469163 CRYGAP11844 174 aa7.67□□□□□ -1.18
NUP50-214ENST00000469163 POM121L12Q8N7R1 296 aa7.67□□□□□ -1.18
NUP50-214ENST00000469163 SRSF12Q8WXF0 261 aaKnown RBP7.67□□□□□ -1.18
NUP50-214ENST00000469163 C2orf82Q6UX34 121 aa7.66□□□□□ -1.18
NUP50-214ENST00000469163 ORMDL3Q8N138 153 aa7.66□□□□□ -1.18
NUP50-214ENST00000469163 COL6A5A8TX70 2615 aa7.66□□□□□ -1.18
NUP50-214ENST00000469163 C19orf71A6NCJ1 209 aa7.66□□□□□ -1.18
NUP50-214ENST00000469163 CKS2P33552 79 aa7.66□□□□□ -1.18
NUP50-214ENST00000469163 C9orf85Q96MD7 179 aa7.66□□□□□ -1.18
NUP50-214ENST00000469163 IGHV1-3A0A0C4DH29 117 aa7.66□□□□□ -1.18
NUP50-214ENST00000469163 E7EUB6 86 aa7.66□□□□□ -1.18
NUP50-214ENST00000469163 G3V318 75 aa7.66□□□□□ -1.18
NUP50-214ENST00000469163 SLC25A16P16260 332 aa7.66□□□□□ -1.18
NUP50-214ENST00000469163 LYZP61626 148 aa7.66□□□□□ -1.18
NUP50-214ENST00000469163 TMEM170BQ5T4T1 132 aa7.66□□□□□ -1.18
NUP50-214ENST00000469163 Q6ZSR3 168 aa7.65□□□□□ -1.18
NUP50-214ENST00000469163 NDUFA11Q86Y39 141 aa7.65□□□□□ -1.18
NUP50-214ENST00000469163 MYOZ3Q8TDC0 251 aa7.65□□□□□ -1.18
NUP50-214ENST00000469163 NACAE9PAV3 2078 aa7.65□□□□□ -1.18
NUP50-214ENST00000469163 ZNF815PA8K554 130 aa7.65□□□□□ -1.18
NUP50-214ENST00000469163 BUB1B-PAK6H3BSN5 160 aa7.65□□□□□ -1.18
NUP50-214ENST00000469163 RPL27AP46776 148 aaKnown RBP7.65□□□□□ -1.18
NUP50-214ENST00000469163 CGB1A6NKQ9 187 aa7.65□□□□□ -1.19
NUP50-214ENST00000469163 FBXL19-AS1Q494R0 122 aa7.64□□□□□ -1.19
NUP50-214ENST00000469163 DYNAPQ8N1N2 210 aa7.64□□□□□ -1.19
NUP50-214ENST00000469163 LINC01620Q4KN68 170 aa7.64□□□□□ -1.19
NUP50-214ENST00000469163 PAXXQ9BUH6 204 aa7.64□□□□□ -1.19
NUP50-214ENST00000469163 UBE2D1P51668 147 aa7.64□□□□□ -1.19
NUP50-214ENST00000469163 SLC25A48Q6ZT89 311 aaKnown RBP7.64□□□□□ -1.19
NUP50-214ENST00000469163 LINC00311Q8N616 119 aa7.64□□□□□ -1.19
NUP50-214ENST00000469163 TIRAPP58753 221 aa7.63□□□□□ -1.19
NUP50-214ENST00000469163 BRWD1-AS2P59051 145 aa7.63□□□□□ -1.19
NUP50-214ENST00000469163 PLA2G2AP14555 144 aa7.63□□□□□ -1.19
NUP50-214ENST00000469163 EBI3Q14213 229 aa7.63□□□□□ -1.19
NUP50-214ENST00000469163 C6orf226Q5I0X4 101 aa7.63□□□□□ -1.19
NUP50-214ENST00000469163 MORN5Q5VZ52 161 aa7.63□□□□□ -1.19
NUP50-214ENST00000469163 C16orf92Q96LL3 132 aa7.63□□□□□ -1.19
NUP50-214ENST00000469163 GFRA4Q9GZZ7 299 aa7.63□□□□□ -1.19
NUP50-214ENST00000469163 ZNF492Q9P255 531 aa7.63□□□□□ -1.19
NUP50-214ENST00000469163 CIRBPQ14011 172 aaKnown RBP7.62□□□□□ -1.19
NUP50-214ENST00000469163 ATXN8Q156A1 80 aa7.62□□□□□ -1.19
NUP50-214ENST00000469163 CT83Q5H943 113 aa7.62□□□□□ -1.19
NUP50-214ENST00000469163 PRO1854Q9UHT4 67 aa7.62□□□□□ -1.19
NUP50-214ENST00000469163 TMEM89A2RUT3 159 aa7.62□□□□□ -1.19
NUP50-214ENST00000469163 MSMBP08118 114 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms