RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 SSTP61278 116 aa9.6□□□□□ -0.87
CCHCR1-211ENST00000467553 FAM74A4Q5TZK3 123 aa9.6□□□□□ -0.87
CCHCR1-211ENST00000467553 ZFP82Q8N141 532 aa9.6□□□□□ -0.87
CCHCR1-211ENST00000467553 MAPKAPK5-AS1Q8N8E1 139 aa9.6□□□□□ -0.87
CCHCR1-211ENST00000467553 KRTAP1-5Q9BYS1 174 aa9.6□□□□□ -0.87
CCHCR1-211ENST00000467553 A0A087WWL8 130 aa9.59□□□□□ -0.87
CCHCR1-211ENST00000467553 MUC21A0A0G2JKD1 596 aa9.59□□□□□ -0.87
CCHCR1-211ENST00000467553 MUC21A0A140T8X8 626 aa9.59□□□□□ -0.87
CCHCR1-211ENST00000467553 RBFOX3A6NFN3 312 aa9.59□□□□□ -0.87
CCHCR1-211ENST00000467553 SFRP2Q96HF1 295 aa9.59□□□□□ -0.87
CCHCR1-211ENST00000467553 TRAV9-2A0A087WT02 112 aa9.58□□□□□ -0.88
CCHCR1-211ENST00000467553 EREGO14944 169 aa9.58□□□□□ -0.88
CCHCR1-211ENST00000467553 CXCL1P09341 107 aa9.58□□□□□ -0.88
CCHCR1-211ENST00000467553 NFE4Q86UQ8 179 aa9.58□□□□□ -0.88
CCHCR1-211ENST00000467553 WFDC10BQ8IUB3 73 aa9.58□□□□□ -0.88
CCHCR1-211ENST00000467553 Q8N1X5 172 aa9.58□□□□□ -0.88
CCHCR1-211ENST00000467553 KRTAP4-5Q9BYR2 181 aa9.58□□□□□ -0.88
CCHCR1-211ENST00000467553 PGPEP1Q9NXJ5 209 aa9.58□□□□□ -0.88
CCHCR1-211ENST00000467553 GAGE12JA6NER3 117 aa9.57□□□□□ -0.88
CCHCR1-211ENST00000467553 RHODO00212 210 aa9.57□□□□□ -0.88
CCHCR1-211ENST00000467553 GZMBP10144 247 aa9.57□□□□□ -0.88
CCHCR1-211ENST00000467553 GAGE1Q13065 139 aa9.57□□□□□ -0.88
CCHCR1-211ENST00000467553 GAGE4Q13068 117 aa9.57□□□□□ -0.88
CCHCR1-211ENST00000467553 GAGE5Q13069 117 aa9.57□□□□□ -0.88
CCHCR1-211ENST00000467553 GAGE13Q4V321 117 aa9.57□□□□□ -0.88
CCHCR1-211ENST00000467553 SPANXN1Q5VSR9 72 aa9.57□□□□□ -0.88
CCHCR1-211ENST00000467553 UFSP1Q6NVU6 142 aa9.57□□□□□ -0.88
CCHCR1-211ENST00000467553 C14orf178Q8N769 122 aaPredicted RBP9.57□□□□□ -0.88
CCHCR1-211ENST00000467553 OR2D3Q8NGH3 330 aa9.57□□□□□ -0.88
CCHCR1-211ENST00000467553 OR10AG1Q8NH19 301 aa9.57□□□□□ -0.88
CCHCR1-211ENST00000467553 ATP6V0E2Q8NHE4 81 aa9.57□□□□□ -0.88
CCHCR1-211ENST00000467553 Q9UF83 564 aa9.57□□□□□ -0.88
CCHCR1-211ENST00000467553 LY96Q9Y6Y9 160 aa9.57□□□□□ -0.88
CCHCR1-211ENST00000467553 TRBV20OR9-2A0A075B6H5 130 aa9.56□□□□□ -0.88
CCHCR1-211ENST00000467553 CRYGDP07320 174 aa9.56□□□□□ -0.88
CCHCR1-211ENST00000467553 CEBPGP53567 150 aa9.56□□□□□ -0.88
CCHCR1-211ENST00000467553 LINC00315P59091 139 aa9.56□□□□□ -0.88
CCHCR1-211ENST00000467553 LYPD6BQ8NI32 183 aa9.56□□□□□ -0.88
CCHCR1-211ENST00000467553 SMIM12Q96EX1 92 aa9.56□□□□□ -0.88
CCHCR1-211ENST00000467553 TPPP3Q9BW30 176 aa9.56□□□□□ -0.88
CCHCR1-211ENST00000467553 SSBP4Q9BWG4 385 aaPredicted RBP9.56□□□□□ -0.88
CCHCR1-211ENST00000467553 EIF5A2Q9GZV4 153 aaKnown RBP9.56□□□□□ -0.88
CCHCR1-211ENST00000467553 BIN3Q9NQY0 253 aa9.56□□□□□ -0.88
CCHCR1-211ENST00000467553 C19orf71A6NCJ1 209 aa9.55□□□□□ -0.88
CCHCR1-211ENST00000467553 SNAI2O43623 268 aa9.55□□□□□ -0.88
CCHCR1-211ENST00000467553 P01737 135 aa9.55□□□□□ -0.88
CCHCR1-211ENST00000467553 OR5AL1P0C617 328 aa9.55□□□□□ -0.88
CCHCR1-211ENST00000467553 EVI2AP22794 236 aa9.55□□□□□ -0.88
CCHCR1-211ENST00000467553 TIRAPP58753 221 aa9.55□□□□□ -0.88
CCHCR1-211ENST00000467553 RPS20P60866 119 aaKnown RBP9.55□□□□□ -0.88
CCHCR1-211ENST00000467553 OR10J3Q5JRS4 329 aa9.55□□□□□ -0.88
CCHCR1-211ENST00000467553 TOR2AQ5JU69 321 aa9.55□□□□□ -0.88
CCHCR1-211ENST00000467553 CDPF1Q6NVV7 123 aa9.55□□□□□ -0.88
CCHCR1-211ENST00000467553 Q6ZRN7 208 aaPredicted RBP9.55□□□□□ -0.88
CCHCR1-211ENST00000467553 OCC1Q8TAD7 63 aa9.55□□□□□ -0.88
CCHCR1-211ENST00000467553 GTSF1LQ9H1H1 148 aa9.55□□□□□ -0.88
CCHCR1-211ENST00000467553 TRAV8-6A0A0B4J262 113 aa9.54□□□□□ -0.88
CCHCR1-211ENST00000467553 ERVFC1-1P60608 527 aa9.54□□□□□ -0.88
CCHCR1-211ENST00000467553 NUDT10Q8NFP7 164 aa9.54□□□□□ -0.88
CCHCR1-211ENST00000467553 NUDT11Q96G61 164 aa9.54□□□□□ -0.88
CCHCR1-211ENST00000467553 TNFRSF18Q9Y5U5 241 aa9.54□□□□□ -0.88
CCHCR1-211ENST00000467553 IGHV3-38A0A0C4DH36 116 aa9.53□□□□□ -0.88
CCHCR1-211ENST00000467553 XKRY2A2RUG3 117 aa9.53□□□□□ -0.88
CCHCR1-211ENST00000467553 TMEM250H0YL14 139 aa9.53□□□□□ -0.88
CCHCR1-211ENST00000467553 KRTAP10-2P60368 255 aa9.53□□□□□ -0.88
CCHCR1-211ENST00000467553 FER1L6-AS1Q8NA97 138 aa9.53□□□□□ -0.88
CCHCR1-211ENST00000467553 F5H697 171 aa9.52□□□□□ -0.89
CCHCR1-211ENST00000467553 DNAH10OSP0CZ25 163 aa9.52□□□□□ -0.89
CCHCR1-211ENST00000467553 SMIM17P0DL12 118 aa9.52□□□□□ -0.89
CCHCR1-211ENST00000467553 ZNF56Q15929 161 aa9.52□□□□□ -0.89
CCHCR1-211ENST00000467553 LELP1Q5T871 98 aa9.52□□□□□ -0.89
CCHCR1-211ENST00000467553 K7EN84 100 aa9.51□□□□□ -0.89
CCHCR1-211ENST00000467553 IGLC6P0CF74 106 aa9.51□□□□□ -0.89
CCHCR1-211ENST00000467553 RAB4BP61018 213 aa9.51□□□□□ -0.89
CCHCR1-211ENST00000467553 FAM210AQ96ND0 272 aa9.51□□□□□ -0.89
CCHCR1-211ENST00000467553 RNASE7Q9H1E1 156 aaKnown RBP9.51□□□□□ -0.89
CCHCR1-211ENST00000467553 F2Z2F3 143 aa9.5□□□□□ -0.89
CCHCR1-211ENST00000467553 IGHV3-30P01768 117 aa9.5□□□□□ -0.89
CCHCR1-211ENST00000467553 IGHV3-33P01772 117 aa9.5□□□□□ -0.89
CCHCR1-211ENST00000467553 IGHV3-30-3P0DP02 117 aa9.5□□□□□ -0.89
CCHCR1-211ENST00000467553 IGHV3-30-5P0DP03 117 aa9.5□□□□□ -0.89
CCHCR1-211ENST00000467553 RPL36AP83881 106 aaKnown RBP9.5□□□□□ -0.89
CCHCR1-211ENST00000467553 TEX261Q6UWH6 196 aa9.5□□□□□ -0.89
CCHCR1-211ENST00000467553 LYZL1Q6UWQ5 148 aa9.5□□□□□ -0.89
CCHCR1-211ENST00000467553 C10orf126Q8N4M7 172 aa9.5□□□□□ -0.89
CCHCR1-211ENST00000467553 RPL36ALQ969Q0 106 aaKnown RBP9.5□□□□□ -0.89
CCHCR1-211ENST00000467553 MSRB1Q9NZV6 116 aa9.5□□□□□ -0.89
CCHCR1-211ENST00000467553 TRBV10-1A0A0K0K1A3 114 aa9.49□□□□□ -0.89
CCHCR1-211ENST00000467553 LINC00694P0DN24 101 aa9.49□□□□□ -0.89
CCHCR1-211ENST00000467553 CACNG7P62955 275 aa9.49□□□□□ -0.89
CCHCR1-211ENST00000467553 AP1S3Q96PC3 154 aa9.49□□□□□ -0.89
CCHCR1-211ENST00000467553 SMIM7Q9BQ49 75 aa9.49□□□□□ -0.89
CCHCR1-211ENST00000467553 RPP21Q9H633 154 aaKnown RBP9.49□□□□□ -0.89
CCHCR1-211ENST00000467553 VPS13BQ7Z7G8 4022 aa9.48□□□□□ -0.89
CCHCR1-211ENST00000467553 TRBV7-3A0A075B6L6 115 aa9.48□□□□□ -0.89
CCHCR1-211ENST00000467553 GATCO43716 136 aaKnown RBP9.48□□□□□ -0.89
CCHCR1-211ENST00000467553 SRP19P09132 144 aaKnown RBP9.48□□□□□ -0.89
CCHCR1-211ENST00000467553 NTF3P20783 257 aa9.48□□□□□ -0.89
CCHCR1-211ENST00000467553 LINC01556Q5JQF7 62 aa9.48□□□□□ -0.89
CCHCR1-211ENST00000467553 A0A087WWC5 75 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms