RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 DEFB113Q30KQ7 82 aa2.05□□□□□ -2.08
VPS50-209ENST00000467326 NMSQ5H8A3 153 aa2.05□□□□□ -2.08
VPS50-209ENST00000467326 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
VPS50-209ENST00000467326 SYCP2Q9BX26 1530 aa2.05□□□□□ -2.08
VPS50-209ENST00000467326 ARHGEF12Q9NZN5 1544 aa2.05□□□□□ -2.08
VPS50-209ENST00000467326 PTPRSQ13332 1948 aa2.05□□□□□ -2.08
VPS50-209ENST00000467326 MYH9P35579 1960 aaKnown RBP2.05□□□□□ -2.08
VPS50-209ENST00000467326 NUP214P35658 2090 aaPredicted RBP2.05□□□□□ -2.08
VPS50-209ENST00000467326 TRBV10-3A0A0K0K1G6 114 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 A0A1W2PNM2 257 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 hADV29S1A0JD25 119 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 EFCAB5A4FU69 1503 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 CCKP06307 115 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 CTSGP08311 255 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 MYH6P13533 1939 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 HRES1P13985 223 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 PTPRBP23467 1997 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 URB2Q14146 1524 aaKnown RBP2.04□□□□□ -2.08
VPS50-209ENST00000467326 Q1T7F1 81 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 C9orf116Q5BN46 136 aaPredicted RBP2.04□□□□□ -2.08
VPS50-209ENST00000467326 ZCCHC23Q6ZST2 131 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 ZNF833PQ6ZTB9 187 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 NDUFA11Q86Y39 141 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 KIF20BQ96Q89 1820 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 ZNF407Q9C0G0 2248 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 ANAPC1Q9H1A4 1944 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 DYNLRB1Q9NP97 96 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 PRO2289Q9P1D8 64 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 SCN8AQ9UQD0 1980 aa2.04□□□□□ -2.08
VPS50-209ENST00000467326 PLXNB1O43157 2135 aa2.03□□□□□ -2.08
VPS50-209ENST00000467326 COL27A1Q8IZC6 1860 aaPredicted RBP2.03□□□□□ -2.08
VPS50-209ENST00000467326 SCN4AP35499 1836 aa2.03□□□□□ -2.08
VPS50-209ENST00000467326 SLX4Q8IY92 1834 aa2.03□□□□□ -2.08
VPS50-209ENST00000467326 MARF1Q9Y4F3 1742 aaKnown RBP2.03□□□□□ -2.08
VPS50-209ENST00000467326 SETBP1Q9Y6X0 1596 aa2.03□□□□□ -2.08
VPS50-209ENST00000467326 NKTRP30414 1462 aaKnown RBP2.03□□□□□ -2.08
VPS50-209ENST00000467326 LRRC9Q6ZRR7 1453 aa2.03□□□□□ -2.08
VPS50-209ENST00000467326 TMEM30CPA0ZSE6 113 aa2.03□□□□□ -2.08
VPS50-209ENST00000467326 C2orf70A6NJV1 201 aa2.03□□□□□ -2.08
VPS50-209ENST00000467326 F2Z2F3 143 aa2.03□□□□□ -2.08
VPS50-209ENST00000467326 CCL16O15467 120 aa2.03□□□□□ -2.08
VPS50-209ENST00000467326 PDE6HQ13956 83 aa2.03□□□□□ -2.08
VPS50-209ENST00000467326 WFDC2Q14508 124 aa2.03□□□□□ -2.08
VPS50-209ENST00000467326 LINC00643Q86TS7 51 aa2.03□□□□□ -2.08
VPS50-209ENST00000467326 Q8TAT8 98 aa2.03□□□□□ -2.08
VPS50-209ENST00000467326 CYP4F30PQ9H0H9 118 aa2.03□□□□□ -2.08
VPS50-209ENST00000467326 CABIN1Q9Y6J0 2220 aa2.03□□□□□ -2.08
VPS50-209ENST00000467326 CCDC88AQ3V6T2 1871 aa2.03□□□□□ -2.09
VPS50-209ENST00000467326 TUBGCP6Q96RT7 1819 aa2.03□□□□□ -2.09
VPS50-209ENST00000467326 ARAP2Q8WZ64 1704 aa2.03□□□□□ -2.09
VPS50-209ENST00000467326 SHANK3Q9BYB0 1731 aa2.03□□□□□ -2.09
VPS50-209ENST00000467326 MROH1Q8NDA8 1641 aa2.02□□□□□ -2.09
VPS50-209ENST00000467326 CC2D2AQ9P2K1 1620 aa2.02□□□□□ -2.09
VPS50-209ENST00000467326 ATP10BO94823 1461 aa2.02□□□□□ -2.09
VPS50-209ENST00000467326 NRXN1Q9ULB1 1477 aa2.02□□□□□ -2.09
VPS50-209ENST00000467326 SCN9AQ15858 1988 aa2.02□□□□□ -2.09
VPS50-209ENST00000467326 GREB1Q4ZG55 1949 aa2.02□□□□□ -2.09
VPS50-209ENST00000467326 MYH13Q9UKX3 1938 aa2.02□□□□□ -2.09
VPS50-209ENST00000467326 TRAV13-2A0A0B4J235 113 aa2.02□□□□□ -2.09
VPS50-209ENST00000467326 RNASE2P10153 161 aaKnown RBP2.02□□□□□ -2.09
VPS50-209ENST00000467326 C1orf137Q5JT78 98 aa2.02□□□□□ -2.09
VPS50-209ENST00000467326 TMEM170BQ5T4T1 132 aa2.02□□□□□ -2.09
VPS50-209ENST00000467326 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.02□□□□□ -2.09
VPS50-209ENST00000467326 SPTSSBQ8NFR3 76 aa2.02□□□□□ -2.09
VPS50-209ENST00000467326 TIMM21Q9BVV7 248 aa2.02□□□□□ -2.09
VPS50-209ENST00000467326 CCL26Q9Y258 94 aa2.02□□□□□ -2.09
VPS50-209ENST00000467326 PTPN23Q9H3S7 1636 aa2.02□□□□□ -2.09
VPS50-209ENST00000467326 DOCK9Q9BZ29 2069 aa2.02□□□□□ -2.09
VPS50-209ENST00000467326 SLIT2O94813 1529 aa2.01□□□□□ -2.09
VPS50-209ENST00000467326 CUX1P39880 1505 aa2.01□□□□□ -2.09
VPS50-209ENST00000467326 THADAQ6YHU6 1953 aa2.01□□□□□ -2.09
VPS50-209ENST00000467326 EDC4Q6P2E9 1401 aaKnown RBP2.01□□□□□ -2.09
VPS50-209ENST00000467326 SUPT6HQ7KZ85 1726 aaKnown RBP2.01□□□□□ -2.09
VPS50-209ENST00000467326 PEAK1Q9H792 1746 aa2.01□□□□□ -2.09
VPS50-209ENST00000467326 SNRPGP15A8MWD9 76 aa2.01□□□□□ -2.09
VPS50-209ENST00000467326 IGHV3-33P01772 117 aa2.01□□□□□ -2.09
VPS50-209ENST00000467326 IGFBP7Q16270 282 aa2.01□□□□□ -2.09
VPS50-209ENST00000467326 IGFL1Q6UW32 110 aa2.01□□□□□ -2.09
VPS50-209ENST00000467326 CYP2G1PQ6ZSU1 146 aa2.01□□□□□ -2.09
VPS50-209ENST00000467326 C6orf201Q7Z4U5 140 aa2.01□□□□□ -2.09
VPS50-209ENST00000467326 C9orf163Q8N9P6 203 aa2.01□□□□□ -2.09
VPS50-209ENST00000467326 TVP23CQ96ET8 276 aa2.01□□□□□ -2.09
VPS50-209ENST00000467326 LINC01600Q96MT4 127 aa2.01□□□□□ -2.09
VPS50-209ENST00000467326 ORMDL1Q9P0S3 153 aa2.01□□□□□ -2.09
VPS50-209ENST00000467326 PREX2Q70Z35 1606 aa2.01□□□□□ -2.09
VPS50-209ENST00000467326 LCTP09848 1927 aa2.01□□□□□ -2.09
VPS50-209ENST00000467326 KCPQ6ZWJ8 1503 aa2.01□□□□□ -2.09
VPS50-209ENST00000467326 PLXNA3P51805 1871 aa2.01□□□□□ -2.09
VPS50-209ENST00000467326 KIDINS220Q9ULH0 1771 aa2□□□□□ -2.09
VPS50-209ENST00000467326 KDM6BO15054 1643 aa2□□□□□ -2.09
VPS50-209ENST00000467326 IGKV1D-17A0A075B6S4 117 aa2□□□□□ -2.09
VPS50-209ENST00000467326 TRBV10-1A0A0K0K1A3 114 aa2□□□□□ -2.09
VPS50-209ENST00000467326 IGLV6-57P01721 117 aa2□□□□□ -2.09
VPS50-209ENST00000467326 CFAP126Q5VTH2 177 aa2□□□□□ -2.09
VPS50-209ENST00000467326 KRTAP26-1Q6PEX3 210 aa2□□□□□ -2.09
VPS50-209ENST00000467326 AMELYQ99218 206 aa2□□□□□ -2.09
VPS50-209ENST00000467326 C22orf24Q9Y442 160 aa2□□□□□ -2.09
VPS50-209ENST00000467326 ADGRB3O60242 1522 aa2□□□□□ -2.09
VPS50-209ENST00000467326 CLASP1Q7Z460 1538 aa2□□□□□ -2.09
VPS50-209ENST00000467326 MYH1P12882 1939 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms