RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 ZFP82Q8N141 532 aa13.13□□□□□ -0.31
GMDS-203ENST00000467288 C10orf126Q8N4M7 172 aa13.13□□□□□ -0.31
GMDS-203ENST00000467288 GAGE12JA6NER3 117 aa13.12□□□□□ -0.31
GMDS-203ENST00000467288 M0R381 172 aa13.12□□□□□ -0.31
GMDS-203ENST00000467288 CDK2AP2O75956 126 aa13.12□□□□□ -0.31
GMDS-203ENST00000467288 RPL35P42766 123 aaKnown RBP13.12□□□□□ -0.31
GMDS-203ENST00000467288 RPL19P84098 196 aaKnown RBP13.12□□□□□ -0.31
GMDS-203ENST00000467288 GAGE1Q13065 139 aa13.12□□□□□ -0.31
GMDS-203ENST00000467288 GAGE4Q13068 117 aa13.12□□□□□ -0.31
GMDS-203ENST00000467288 GAGE5Q13069 117 aa13.12□□□□□ -0.31
GMDS-203ENST00000467288 GAGE13Q4V321 117 aa13.12□□□□□ -0.31
GMDS-203ENST00000467288 C14orf178Q8N769 122 aaPredicted RBP13.12□□□□□ -0.31
GMDS-203ENST00000467288 Q9UF83 564 aa13.12□□□□□ -0.31
GMDS-203ENST00000467288 APOBP04114 4563 aaKnown RBP13.12□□□□□ -0.31
GMDS-203ENST00000467288 OR10J3Q5JRS4 329 aa13.11□□□□□ -0.31
GMDS-203ENST00000467288 DERL1Q9BUN8 251 aa13.11□□□□□ -0.31
GMDS-203ENST00000467288 A0A087WWL8 130 aa13.1□□□□□ -0.31
GMDS-203ENST00000467288 FAM74A4Q5TZK3 123 aa13.1□□□□□ -0.31
GMDS-203ENST00000467288 AKAP14Q86UN6 197 aa13.1□□□□□ -0.31
GMDS-203ENST00000467288 MAPKAPK5-AS1Q8N8E1 139 aa13.1□□□□□ -0.31
GMDS-203ENST00000467288 SSBP4Q9BWG4 385 aaPredicted RBP13.1□□□□□ -0.31
GMDS-203ENST00000467288 SNAI2O43623 268 aa13.09□□□□□ -0.31
GMDS-203ENST00000467288 ERVFC1-1P60608 527 aa13.09□□□□□ -0.31
GMDS-203ENST00000467288 PRR27Q6MZM9 219 aa13.09□□□□□ -0.31
GMDS-203ENST00000467288 C9orf62Q8N4C0 152 aa13.09□□□□□ -0.31
GMDS-203ENST00000467288 IBA57-AS1B1ANH7 110 aa13.08□□□□□ -0.32
GMDS-203ENST00000467288 MEF2BQ02080 365 aaPredicted RBP13.08□□□□□ -0.32
GMDS-203ENST00000467288 hCG_2014768A0A024R1R8 64 aa13.07□□□□□ -0.32
GMDS-203ENST00000467288 A0A087WTM6 91 aa13.07□□□□□ -0.32
GMDS-203ENST00000467288 IFNA1P01562 189 aa13.07□□□□□ -0.32
GMDS-203ENST00000467288 IGLV2-8P01709 118 aa13.07□□□□□ -0.32
GMDS-203ENST00000467288 OR5AL1P0C617 328 aa13.07□□□□□ -0.32
GMDS-203ENST00000467288 CENPWQ5EE01 88 aa13.07□□□□□ -0.32
GMDS-203ENST00000467288 OR10AG1Q8NH19 301 aa13.07□□□□□ -0.32
GMDS-203ENST00000467288 EREGO14944 169 aa13.06□□□□□ -0.32
GMDS-203ENST00000467288 PDE6DO43924 150 aa13.06□□□□□ -0.32
GMDS-203ENST00000467288 BCL2P10415 239 aa13.06□□□□□ -0.32
GMDS-203ENST00000467288 SMIM12Q96EX1 92 aa13.06□□□□□ -0.32
GMDS-203ENST00000467288 PGPEP1Q9NXJ5 209 aa13.06□□□□□ -0.32
GMDS-203ENST00000467288 TRBV10-1A0A0K0K1A3 114 aa13.05□□□□□ -0.32
GMDS-203ENST00000467288 RAB19A4D1S5 217 aa13.05□□□□□ -0.32
GMDS-203ENST00000467288 IGHV3-30P01768 117 aa13.05□□□□□ -0.32
GMDS-203ENST00000467288 IGHV3-33P01772 117 aa13.05□□□□□ -0.32
GMDS-203ENST00000467288 IGHV3-30-3P0DP02 117 aa13.05□□□□□ -0.32
GMDS-203ENST00000467288 IGHV3-30-5P0DP03 117 aa13.05□□□□□ -0.32
GMDS-203ENST00000467288 VAX2Q9UIW0 290 aa13.05□□□□□ -0.32
GMDS-203ENST00000467288 A0A087WWC5 75 aa13.04□□□□□ -0.32
GMDS-203ENST00000467288 C19orf71A6NCJ1 209 aa13.03□□□□□ -0.32
GMDS-203ENST00000467288 TAGLN2P37802 199 aaKnown RBP13.03□□□□□ -0.32
GMDS-203ENST00000467288 MED9Q9NWA0 146 aa13.03□□□□□ -0.32
GMDS-203ENST00000467288 MUC21A0A0G2JKD1 596 aa13.02□□□□□ -0.33
GMDS-203ENST00000467288 MUC21A0A140T8X8 626 aa13.02□□□□□ -0.33
GMDS-203ENST00000467288 GNG4P50150 75 aa13.02□□□□□ -0.33
GMDS-203ENST00000467288 RAB4BP61018 213 aa13.02□□□□□ -0.33
GMDS-203ENST00000467288 SPANXN1Q5VSR9 72 aa13.02□□□□□ -0.33
GMDS-203ENST00000467288 CDPF1Q6NVV7 123 aa13.02□□□□□ -0.33
GMDS-203ENST00000467288 Q8N1X5 172 aa13.02□□□□□ -0.33
GMDS-203ENST00000467288 Q8N3U1 123 aa13.02□□□□□ -0.33
GMDS-203ENST00000467288 TRBV20OR9-2A0A075B6H5 130 aa13.01□□□□□ -0.33
GMDS-203ENST00000467288 IGLC6P0CF74 106 aa13.01□□□□□ -0.33
GMDS-203ENST00000467288 UBE2D3P61077 147 aa13.01□□□□□ -0.33
GMDS-203ENST00000467288 UBE2D2P62837 147 aa13.01□□□□□ -0.33
GMDS-203ENST00000467288 RPL36AP83881 106 aaKnown RBP13.01□□□□□ -0.33
GMDS-203ENST00000467288 LAGE3Q14657 143 aa13.01□□□□□ -0.33
GMDS-203ENST00000467288 OR10G8Q8NGN5 311 aa13.01□□□□□ -0.33
GMDS-203ENST00000467288 RPL36ALQ969Q0 106 aaKnown RBP13.01□□□□□ -0.33
GMDS-203ENST00000467288 DAZAP1Q96EP5 407 aaKnown RBP13.01□□□□□ -0.33
GMDS-203ENST00000467288 TRBV7-3A0A075B6L6 115 aa13□□□□□ -0.33
GMDS-203ENST00000467288 FUSP35637 526 aaKnown RBP eCLIP13□□□□□ -0.33
GMDS-203ENST00000467288 RPS20P60866 119 aaKnown RBP13□□□□□ -0.33
GMDS-203ENST00000467288 OR2D3Q8NGH3 330 aa13□□□□□ -0.33
GMDS-203ENST00000467288 Q9HAA7 133 aa13□□□□□ -0.33
GMDS-203ENST00000467288 KIF25-AS1Q9Y6Z4 181 aa13□□□□□ -0.33
GMDS-203ENST00000467288 LRCOL1A6NCL2 159 aa12.99□□□□□ -0.33
GMDS-203ENST00000467288 GZMBP10144 247 aa12.99□□□□□ -0.33
GMDS-203ENST00000467288 ZNF56Q15929 161 aa12.99□□□□□ -0.33
GMDS-203ENST00000467288 ALKAL2Q6UX46 152 aa12.99□□□□□ -0.33
GMDS-203ENST00000467288 PSCAO43653 123 aa12.98□□□□□ -0.33
GMDS-203ENST00000467288 FER1L6-AS1Q8NA97 138 aa12.98□□□□□ -0.33
GMDS-203ENST00000467288 NEXN-AS1Q8NBZ9 246 aa12.98□□□□□ -0.33
GMDS-203ENST00000467288 BIN3Q9NQY0 253 aa12.98□□□□□ -0.33
GMDS-203ENST00000467288 SSTP61278 116 aa12.97□□□□□ -0.33
GMDS-203ENST00000467288 BLOC1S1P78537 153 aa12.97□□□□□ -0.33
GMDS-203ENST00000467288 DAZ4Q86SG3 579 aaKnown RBP12.97□□□□□ -0.33
GMDS-203ENST00000467288 NIT1Q86X76 327 aa12.97□□□□□ -0.33
GMDS-203ENST00000467288 LYPD6BQ8NI32 183 aa12.97□□□□□ -0.33
GMDS-203ENST00000467288 AP1S3Q96PC3 154 aa12.97□□□□□ -0.33
GMDS-203ENST00000467288 DAZ3Q9NR90 486 aaKnown RBP12.97□□□□□ -0.33
GMDS-203ENST00000467288 HERC1Q15751 4861 aa12.97□□□□□ -0.33
GMDS-203ENST00000467288 RBFOX3A6NFN3 312 aa12.96□□□□□ -0.33
GMDS-203ENST00000467288 P01737 135 aa12.96□□□□□ -0.33
GMDS-203ENST00000467288 TM2D2Q9BX73 214 aa12.96□□□□□ -0.33
GMDS-203ENST00000467288 TRAV8-3A0A0A6YYJ7 113 aa12.95□□□□□ -0.34
GMDS-203ENST00000467288 XKRY2A2RUG3 117 aa12.95□□□□□ -0.34
GMDS-203ENST00000467288 SMIM17P0DL12 118 aa12.95□□□□□ -0.34
GMDS-203ENST00000467288 TOR2AQ5JU69 321 aa12.95□□□□□ -0.34
GMDS-203ENST00000467288 F2Z2F3 143 aa12.94□□□□□ -0.34
GMDS-203ENST00000467288 F5H697 171 aa12.94□□□□□ -0.34
GMDS-203ENST00000467288 CACNG7P62955 275 aa12.94□□□□□ -0.34
GMDS-203ENST00000467288 NUDT10Q8NFP7 164 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms