RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 A6NJY4 79 aa9.52□□□□□ -0.89
ARHGEF3-204ENST00000465659 HOXA3O43365 443 aaPredicted RBP9.52□□□□□ -0.89
ARHGEF3-204ENST00000465659 CD7P09564 240 aa9.52□□□□□ -0.89
ARHGEF3-204ENST00000465659 JPT2Q9H910 190 aa9.52□□□□□ -0.89
ARHGEF3-204ENST00000465659 IGHV3-16A0A0C4DH30 117 aa9.51□□□□□ -0.89
ARHGEF3-204ENST00000465659 TRAV12-3A0A0B4J271 114 aa9.51□□□□□ -0.89
ARHGEF3-204ENST00000465659 B4DSR2 109 aa9.51□□□□□ -0.89
ARHGEF3-204ENST00000465659 GATA3P23771 443 aa9.51□□□□□ -0.89
ARHGEF3-204ENST00000465659 UBE2D1P51668 147 aa9.51□□□□□ -0.89
ARHGEF3-204ENST00000465659 HERVK_113P61574 105 aa9.51□□□□□ -0.89
ARHGEF3-204ENST00000465659 SCGB2A2Q13296 93 aa9.51□□□□□ -0.89
ARHGEF3-204ENST00000465659 WFDC2Q14508 124 aa9.51□□□□□ -0.89
ARHGEF3-204ENST00000465659 PRO0461Q9UI25 63 aa9.51□□□□□ -0.89
ARHGEF3-204ENST00000465659 SDHAF1A6NFY7 115 aa9.5□□□□□ -0.89
ARHGEF3-204ENST00000465659 H3BMG7 143 aa9.5□□□□□ -0.89
ARHGEF3-204ENST00000465659 AVPP01185 164 aa9.5□□□□□ -0.89
ARHGEF3-204ENST00000465659 A0A087WWL8 130 aa9.5□□□□□ -0.89
ARHGEF3-204ENST00000465659 A0A0J9YX75 114 aa9.5□□□□□ -0.89
ARHGEF3-204ENST00000465659 PLEKHB2Q96CS7 222 aa9.5□□□□□ -0.89
ARHGEF3-204ENST00000465659 CD300EQ496F6 205 aaPredicted RBP9.49□□□□□ -0.89
ARHGEF3-204ENST00000465659 ZNF876PQ49A33 203 aa9.49□□□□□ -0.89
ARHGEF3-204ENST00000465659 SCGB1D4Q6XE38 83 aa9.49□□□□□ -0.89
ARHGEF3-204ENST00000465659 F5H697 171 aa9.49□□□□□ -0.89
ARHGEF3-204ENST00000465659 RPL39P62891 51 aaKnown RBP9.49□□□□□ -0.89
ARHGEF3-204ENST00000465659 GAGE13Q4V321 117 aa9.49□□□□□ -0.89
ARHGEF3-204ENST00000465659 RNF152Q8N8N0 203 aa9.49□□□□□ -0.89
ARHGEF3-204ENST00000465659 SYT8Q8NBV8 401 aa9.49□□□□□ -0.89
ARHGEF3-204ENST00000465659 K7EQG2 157 aa9.49□□□□□ -0.89
ARHGEF3-204ENST00000465659 M0QY20 66 aa9.49□□□□□ -0.89
ARHGEF3-204ENST00000465659 SNRPD3P62318 126 aaKnown RBP9.49□□□□□ -0.89
ARHGEF3-204ENST00000465659 RHOHQ15669 191 aa9.49□□□□□ -0.89
ARHGEF3-204ENST00000465659 TMEM95Q3KNT9 176 aa9.49□□□□□ -0.89
ARHGEF3-204ENST00000465659 A0A0J9YY99 117 aa9.48□□□□□ -0.89
ARHGEF3-204ENST00000465659 NSUN5P1Q3KNT7 163 aa9.48□□□□□ -0.89
ARHGEF3-204ENST00000465659 AMTNQ6UX39 209 aa9.48□□□□□ -0.89
ARHGEF3-204ENST00000465659 KLHL30-AS1Q8NEE0 82 aa9.48□□□□□ -0.89
ARHGEF3-204ENST00000465659 PGPEP1Q9NXJ5 209 aa9.48□□□□□ -0.89
ARHGEF3-204ENST00000465659 J3QR89 54 aa9.48□□□□□ -0.89
ARHGEF3-204ENST00000465659 ZNF688P0C7X2 276 aa9.48□□□□□ -0.89
ARHGEF3-204ENST00000465659 SRSF9Q13242 221 aaKnown RBP eCLIP9.48□□□□□ -0.89
ARHGEF3-204ENST00000465659 WFDC12Q8WWY7 111 aa9.48□□□□□ -0.89
ARHGEF3-204ENST00000465659 MDFICQ9P1T7 246 aa9.48□□□□□ -0.89
ARHGEF3-204ENST00000465659 DSCR9P59020 149 aa9.47□□□□□ -0.89
ARHGEF3-204ENST00000465659 NFE4Q86UQ8 179 aa9.47□□□□□ -0.89
ARHGEF3-204ENST00000465659 Q8N1Y9 231 aa9.47□□□□□ -0.89
ARHGEF3-204ENST00000465659 IGHV1OR15-1A0A075B7D0 117 aa9.47□□□□□ -0.89
ARHGEF3-204ENST00000465659 ZNRF2Q8NHG8 242 aa9.47□□□□□ -0.89
ARHGEF3-204ENST00000465659 MRPL16Q9NX20 251 aaKnown RBP9.47□□□□□ -0.89
ARHGEF3-204ENST00000465659 UTP20O75691 2785 aaKnown RBP9.46□□□□□ -0.89
ARHGEF3-204ENST00000465659 IGHV4-59P01825 116 aa9.46□□□□□ -0.89
ARHGEF3-204ENST00000465659 TRPT1Q86TN4 253 aaKnown RBP9.46□□□□□ -0.89
ARHGEF3-204ENST00000465659 ZNF256Q9Y2P7 627 aaPredicted RBP9.46□□□□□ -0.89
ARHGEF3-204ENST00000465659 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.46□□□□□ -0.92e-7■■■□□ 14.6
ARHGEF3-204ENST00000465659 SLC25A29Q8N8R3 303 aa9.46□□□□□ -0.9
ARHGEF3-204ENST00000465659 AMELXQ99217 191 aa9.46□□□□□ -0.9
ARHGEF3-204ENST00000465659 CENPEQ02224 2701 aa9.46□□□□□ -0.9
ARHGEF3-204ENST00000465659 TMEM238C9JI98 176 aa9.45□□□□□ -0.9
ARHGEF3-204ENST00000465659 EMP1P54849 157 aa9.45□□□□□ -0.9
ARHGEF3-204ENST00000465659 TSPEAR-AS2P59090 65 aa9.45□□□□□ -0.9
ARHGEF3-204ENST00000465659 DEFB112Q30KQ8 113 aa9.45□□□□□ -0.9
ARHGEF3-204ENST00000465659 ETDBQ3ZM63 59 aa9.45□□□□□ -0.9
ARHGEF3-204ENST00000465659 FAM74A4Q5TZK3 123 aa9.45□□□□□ -0.9
ARHGEF3-204ENST00000465659 TRAV12-2A0A075B6T6 113 aa9.45□□□□□ -0.9
ARHGEF3-204ENST00000465659 TSPAN13O95857 204 aa9.45□□□□□ -0.9
ARHGEF3-204ENST00000465659 UBE2D3P61077 147 aa9.45□□□□□ -0.9
ARHGEF3-204ENST00000465659 UBE2D2P62837 147 aa9.45□□□□□ -0.9
ARHGEF3-204ENST00000465659 ZNF56Q15929 161 aa9.45□□□□□ -0.9
ARHGEF3-204ENST00000465659 C10orf99Q6UWK7 81 aa9.45□□□□□ -0.9
ARHGEF3-204ENST00000465659 SH2D6Q7Z4S9 175 aa9.45□□□□□ -0.9
ARHGEF3-204ENST00000465659 IGHV3-30P01768 117 aa9.44□□□□□ -0.9
ARHGEF3-204ENST00000465659 IGHV3-30-5P0DP03 117 aa9.44□□□□□ -0.9
ARHGEF3-204ENST00000465659 DLX4Q92988 240 aaPredicted RBP9.44□□□□□ -0.9
ARHGEF3-204ENST00000465659 TMEM170BQ5T4T1 132 aa9.44□□□□□ -0.9
ARHGEF3-204ENST00000465659 NDUFA11Q86Y39 141 aa9.44□□□□□ -0.9
ARHGEF3-204ENST00000465659 SPAG8Q99932 426 aaPredicted RBP9.44□□□□□ -0.9
ARHGEF3-204ENST00000465659 SPATA25Q9BR10 227 aa9.44□□□□□ -0.9
ARHGEF3-204ENST00000465659 EDA2RQ9HAV5 297 aa9.44□□□□□ -0.9
ARHGEF3-204ENST00000465659 J3QQQ9 107 aa9.43□□□□□ -0.9
ARHGEF3-204ENST00000465659 P0DMU3 169 aa9.43□□□□□ -0.9
ARHGEF3-204ENST00000465659 FAM231AP0DMU4 169 aa9.43□□□□□ -0.9
ARHGEF3-204ENST00000465659 FAM231CP0DMU5 169 aa9.43□□□□□ -0.9
ARHGEF3-204ENST00000465659 SCGB1A1P11684 91 aa9.43□□□□□ -0.9
ARHGEF3-204ENST00000465659 CFAP126Q5VTH2 177 aa9.43□□□□□ -0.9
ARHGEF3-204ENST00000465659 SPINK13Q1W4C9 94 aa9.43□□□□□ -0.9
ARHGEF3-204ENST00000465659 LINC01356Q8N9X3 169 aa9.43□□□□□ -0.9
ARHGEF3-204ENST00000465659 C20orf203Q8NBC4 194 aa9.43□□□□□ -0.9
ARHGEF3-204ENST00000465659 ATP6V0E2Q8NHE4 81 aa9.43□□□□□ -0.9
ARHGEF3-204ENST00000465659 DEFB104AQ8WTQ1 72 aa9.43□□□□□ -0.9
ARHGEF3-204ENST00000465659 TRGV11A0A075B6L2 103 aa9.42□□□□□ -0.9
ARHGEF3-204ENST00000465659 GAGE12HA6NDE8 117 aa9.42□□□□□ -0.9
ARHGEF3-204ENST00000465659 I3L3M4 83 aa9.42□□□□□ -0.9
ARHGEF3-204ENST00000465659 J3QLI3 93 aa9.42□□□□□ -0.9
ARHGEF3-204ENST00000465659 IGKV3-20P01619 116 aa9.42□□□□□ -0.9
ARHGEF3-204ENST00000465659 LYRM7Q5U5X0 104 aa9.42□□□□□ -0.9
ARHGEF3-204ENST00000465659 SIGMAR1Q99720 223 aa9.42□□□□□ -0.9
ARHGEF3-204ENST00000465659 TSSC4Q9Y5U2 329 aaPredicted RBP9.42□□□□□ -0.9
ARHGEF3-204ENST00000465659 TMEM223A0PJW6 202 aa9.42□□□□□ -0.9
ARHGEF3-204ENST00000465659 ELANEP08246 267 aa9.42□□□□□ -0.9
ARHGEF3-204ENST00000465659 SYNJ2BPP57105 145 aa9.42□□□□□ -0.9
ARHGEF3-204ENST00000465659 LEPROTO15243 131 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms