RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 RHOHQ15669 191 aa8.02□□□□□ -1.13
CUX1-207ENST00000465461 LYZL1Q6UWQ5 148 aa8.02□□□□□ -1.13
CUX1-207ENST00000465461 ZFP2Q6ZN57 461 aa8.02□□□□□ -1.13
CUX1-207ENST00000465461 NEGR1Q7Z3B1 354 aa8.02□□□□□ -1.13
CUX1-207ENST00000465461 LINC01551Q86U37 167 aa8.02□□□□□ -1.13
CUX1-207ENST00000465461 PRADC1Q9BSG0 188 aa8.02□□□□□ -1.13
CUX1-207ENST00000465461 Q9H8V8 135 aa8.02□□□□□ -1.13
CUX1-207ENST00000465461 KMT2AQ03164 3969 aa8.02□□□□□ -1.13
CUX1-207ENST00000465461 GAGE12JA6NER3 117 aa8.01□□□□□ -1.13
CUX1-207ENST00000465461 GATCO43716 136 aaKnown RBP8.01□□□□□ -1.13
CUX1-207ENST00000465461 CIDEAO60543 219 aa8.01□□□□□ -1.13
CUX1-207ENST00000465461 NDUFS6O75380 124 aaKnown RBP8.01□□□□□ -1.13
CUX1-207ENST00000465461 NXPH4O95158 308 aa8.01□□□□□ -1.13
CUX1-207ENST00000465461 ERVFC1-1P60608 527 aa8.01□□□□□ -1.13
CUX1-207ENST00000465461 RAB14P61106 215 aa8.01□□□□□ -1.13
CUX1-207ENST00000465461 GAGE1Q13065 139 aa8.01□□□□□ -1.13
CUX1-207ENST00000465461 GAGE4Q13068 117 aa8.01□□□□□ -1.13
CUX1-207ENST00000465461 GAGE5Q13069 117 aa8.01□□□□□ -1.13
CUX1-207ENST00000465461 GAGE13Q4V321 117 aa8.01□□□□□ -1.13
CUX1-207ENST00000465461 MRPS16Q9Y3D3 137 aaKnown RBP8.01□□□□□ -1.13
CUX1-207ENST00000465461 XKRY2A2RUG3 117 aa8□□□□□ -1.13
CUX1-207ENST00000465461 FAM3BP58499 235 aaPredicted RBP8□□□□□ -1.13
CUX1-207ENST00000465461 RPL23P62829 140 aaKnown RBP8□□□□□ -1.13
CUX1-207ENST00000465461 TMEM241Q24JQ0 296 aa8□□□□□ -1.13
CUX1-207ENST00000465461 Q6ZR54 194 aa8□□□□□ -1.13
CUX1-207ENST00000465461 GTSF1Q8WW33 167 aa8□□□□□ -1.13
CUX1-207ENST00000465461 LY96Q9Y6Y9 160 aa8□□□□□ -1.13
CUX1-207ENST00000465461 NBDYA0A0U1RRE5 68 aa7.99□□□□□ -1.13
CUX1-207ENST00000465461 RHODO00212 210 aa7.99□□□□□ -1.13
CUX1-207ENST00000465461 LCE2BO14633 110 aa7.99□□□□□ -1.13
CUX1-207ENST00000465461 NTF3P20783 257 aa7.99□□□□□ -1.13
CUX1-207ENST00000465461 ZNF56Q15929 161 aa7.99□□□□□ -1.13
CUX1-207ENST00000465461 FAM231DQ6ZW35 169 aa7.99□□□□□ -1.13
CUX1-207ENST00000465461 UPK3BQ9BT76 320 aa7.99□□□□□ -1.13
CUX1-207ENST00000465461 KRTAP1-5Q9BYS1 174 aa7.99□□□□□ -1.13
CUX1-207ENST00000465461 F5H697 171 aa7.98□□□□□ -1.13
CUX1-207ENST00000465461 MGPP08493 103 aa7.98□□□□□ -1.13
CUX1-207ENST00000465461 EVI2AP22794 236 aa7.98□□□□□ -1.13
CUX1-207ENST00000465461 CACNG7P62955 275 aa7.98□□□□□ -1.13
CUX1-207ENST00000465461 ADIRFQ15847 76 aa7.98□□□□□ -1.13
CUX1-207ENST00000465461 CLLU1Q5K131 121 aa7.98□□□□□ -1.13
CUX1-207ENST00000465461 WFDC10BQ8IUB3 73 aa7.98□□□□□ -1.13
CUX1-207ENST00000465461 ATP6V0E2Q8NHE4 81 aa7.98□□□□□ -1.13
CUX1-207ENST00000465461 ISOC2Q96AB3 205 aa7.98□□□□□ -1.13
CUX1-207ENST00000465461 PGLYRP4Q96LB8 373 aa7.98□□□□□ -1.13
CUX1-207ENST00000465461 KIF25-AS1Q9Y6Z4 181 aa7.98□□□□□ -1.13
CUX1-207ENST00000465461 A0A1W2PPQ1 181 aa7.97□□□□□ -1.13
CUX1-207ENST00000465461 F2Z2F3 143 aa7.97□□□□□ -1.13
CUX1-207ENST00000465461 RTL8CO15255 209 aa7.97□□□□□ -1.13
CUX1-207ENST00000465461 SIVA1O15304 175 aa7.97□□□□□ -1.13
CUX1-207ENST00000465461 CTRLP40313 264 aa7.97□□□□□ -1.13
CUX1-207ENST00000465461 LINC00315P59091 139 aa7.97□□□□□ -1.13
CUX1-207ENST00000465461 TWIST1Q15672 202 aa7.97□□□□□ -1.13
CUX1-207ENST00000465461 FAM74A3Q4VXF1 159 aa7.97□□□□□ -1.13
CUX1-207ENST00000465461 SOHLH1Q5JUK2 328 aa7.97□□□□□ -1.13
CUX1-207ENST00000465461 AP1S3Q96PC3 154 aa7.97□□□□□ -1.13
CUX1-207ENST00000465461 SMDT1Q9H4I9 107 aa7.97□□□□□ -1.13
CUX1-207ENST00000465461 NAT8Q9UHE5 227 aa7.97□□□□□ -1.13
CUX1-207ENST00000465461 SMIM17P0DL12 118 aa7.96□□□□□ -1.14
CUX1-207ENST00000465461 LINC00694P0DN24 101 aa7.96□□□□□ -1.14
CUX1-207ENST00000465461 FOXA3P55318 350 aaPredicted RBP7.96□□□□□ -1.14
CUX1-207ENST00000465461 RAB4BP61018 213 aa7.96□□□□□ -1.14
CUX1-207ENST00000465461 OSTCQ9NRP0 149 aa7.96□□□□□ -1.14
CUX1-207ENST00000465461 V9GYV3 84 aa7.96□□□□□ -1.14
CUX1-207ENST00000465461 IGHV3-38A0A0C4DH36 116 aa7.95□□□□□ -1.14
CUX1-207ENST00000465461 A8MWL6 223 aa7.95□□□□□ -1.14
CUX1-207ENST00000465461 SH2D6Q7Z4S9 175 aa7.95□□□□□ -1.14
CUX1-207ENST00000465461 NEXN-AS1Q8NBZ9 246 aa7.95□□□□□ -1.14
CUX1-207ENST00000465461 OR10G8Q8NGN5 311 aa7.95□□□□□ -1.14
CUX1-207ENST00000465461 GTSF1LQ9H1H1 148 aa7.95□□□□□ -1.14
CUX1-207ENST00000465461 TNFRSF18Q9Y5U5 241 aa7.95□□□□□ -1.14
CUX1-207ENST00000465461 CT83Q5H943 113 aa7.94□□□□□ -1.14
CUX1-207ENST00000465461 OR10J3Q5JRS4 329 aa7.94□□□□□ -1.14
CUX1-207ENST00000465461 C1orf134Q5TEV5 83 aa7.94□□□□□ -1.14
CUX1-207ENST00000465461 SUMO4Q6EEV6 95 aa7.94□□□□□ -1.14
CUX1-207ENST00000465461 C15orf54Q8N8G6 183 aa7.94□□□□□ -1.14
CUX1-207ENST00000465461 TSKUQ8WUA8 353 aa7.94□□□□□ -1.14
CUX1-207ENST00000465461 DNAH6Q9C0G6 4158 aa7.93□□□□□ -1.14
CUX1-207ENST00000465461 HIGD1CA8MV81 97 aa7.93□□□□□ -1.14
CUX1-207ENST00000465461 TRGC1P0CF51 173 aa7.93□□□□□ -1.14
CUX1-207ENST00000465461 UBE2D3P61077 147 aa7.93□□□□□ -1.14
CUX1-207ENST00000465461 UBE2D2P62837 147 aa7.93□□□□□ -1.14
CUX1-207ENST00000465461 RPL36AP83881 106 aaKnown RBP7.93□□□□□ -1.14
CUX1-207ENST00000465461 LELP1Q5T871 98 aa7.93□□□□□ -1.14
CUX1-207ENST00000465461 WDR73Q6P4I2 378 aa7.93□□□□□ -1.14
CUX1-207ENST00000465461 Q8N3U1 123 aa7.93□□□□□ -1.14
CUX1-207ENST00000465461 DEFB104AQ8WTQ1 72 aa7.93□□□□□ -1.14
CUX1-207ENST00000465461 RPL36ALQ969Q0 106 aaKnown RBP7.93□□□□□ -1.14
CUX1-207ENST00000465461 CNFNQ9BYD5 112 aa7.93□□□□□ -1.14
CUX1-207ENST00000465461 DPH3P1Q9H4G8 78 aa7.93□□□□□ -1.14
CUX1-207ENST00000465461 TRBV7-3A0A075B6L6 115 aa7.92□□□□□ -1.14
CUX1-207ENST00000465461 TRAV26-2A0A0B4J265 109 aa7.92□□□□□ -1.14
CUX1-207ENST00000465461 TRBV10-1A0A0K0K1A3 114 aa7.92□□□□□ -1.14
CUX1-207ENST00000465461 PRSS29PA6NIE9 313 aa7.92□□□□□ -1.14
CUX1-207ENST00000465461 M0QY20 66 aa7.92□□□□□ -1.14
CUX1-207ENST00000465461 IGHV3-30P01768 117 aa7.92□□□□□ -1.14
CUX1-207ENST00000465461 IGHV3-33P01772 117 aa7.92□□□□□ -1.14
CUX1-207ENST00000465461 IGHV3-30-3P0DP02 117 aa7.92□□□□□ -1.14
CUX1-207ENST00000465461 IGHV3-30-5P0DP03 117 aa7.92□□□□□ -1.14
CUX1-207ENST00000465461 TIRAPP58753 221 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms