RNA–Protein interactions for RNA: ENST00000465158.5

RBM39-225, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 825 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-225ENST00000465158 MRPL54Q6P161 138 aaKnown RBP4.86□□□□□ -1.63
RBM39-225ENST00000465158 C1orf158Q8N1D5 194 aa4.86□□□□□ -1.63
RBM39-225ENST00000465158 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.86□□□□□ -1.63
RBM39-225ENST00000465158 IL17DQ8TAD2 202 aa4.86□□□□□ -1.63
RBM39-225ENST00000465158 C9orf85Q96MD7 179 aa4.86□□□□□ -1.63
RBM39-225ENST00000465158 DPH3P1Q9H4G8 78 aa4.86□□□□□ -1.63
RBM39-225ENST00000465158 TIMM8BQ9Y5J9 83 aaPredicted RBP4.86□□□□□ -1.63
RBM39-225ENST00000465158 MUC4Q99102 2169 aa4.86□□□□□ -1.63
RBM39-225ENST00000465158 KRTAP23-1A1A580 65 aa4.85□□□□□ -1.63
RBM39-225ENST00000465158 G3V4G9 280 aa4.85□□□□□ -1.63
RBM39-225ENST00000465158 H7C1H1 209 aa4.85□□□□□ -1.63
RBM39-225ENST00000465158 SPRY2O43597 315 aa4.85□□□□□ -1.63
RBM39-225ENST00000465158 RNASE3P12724 160 aaKnown RBP4.85□□□□□ -1.63
RBM39-225ENST00000465158 HTN1P15515 57 aa4.85□□□□□ -1.63
RBM39-225ENST00000465158 FABP9Q0Z7S8 132 aa4.85□□□□□ -1.63
RBM39-225ENST00000465158 ZNF876PQ49A33 203 aa4.85□□□□□ -1.63
RBM39-225ENST00000465158 GAGE13Q4V321 117 aa4.85□□□□□ -1.63
RBM39-225ENST00000465158 TMEM136Q6ZRR5 245 aa4.85□□□□□ -1.63
RBM39-225ENST00000465158 RASL10AQ92737 203 aa4.85□□□□□ -1.63
RBM39-225ENST00000465158 RNF183Q96D59 192 aa4.85□□□□□ -1.63
RBM39-225ENST00000465158 MRAP2Q96G30 205 aa4.85□□□□□ -1.63
RBM39-225ENST00000465158 OVOL2Q9BRP0 275 aa4.85□□□□□ -1.63
RBM39-225ENST00000465158 IGHV3OR16-12A0A075B7B8 117 aa4.84□□□□□ -1.63
RBM39-225ENST00000465158 LYRM9A8MSI8 78 aa4.84□□□□□ -1.63
RBM39-225ENST00000465158 M0R381 172 aa4.84□□□□□ -1.63
RBM39-225ENST00000465158 PHOX2AO14813 284 aa4.84□□□□□ -1.63
RBM39-225ENST00000465158 TCAPO15273 167 aa4.84□□□□□ -1.63
RBM39-225ENST00000465158 SPINK4O60575 86 aa4.84□□□□□ -1.63
RBM39-225ENST00000465158 S100A6P06703 90 aa4.84□□□□□ -1.63
RBM39-225ENST00000465158 GIG44P09565 113 aaPredicted RBP4.84□□□□□ -1.63
RBM39-225ENST00000465158 PRB4P10163 310 aaPredicted RBP4.84□□□□□ -1.63
RBM39-225ENST00000465158 G0S2P27469 103 aa4.84□□□□□ -1.63
RBM39-225ENST00000465158 KRTAP10-11P60412 298 aa4.84□□□□□ -1.63
RBM39-225ENST00000465158 SLAQ13239 276 aa4.84□□□□□ -1.63
RBM39-225ENST00000465158 FAM104BQ5XKR9 115 aa4.84□□□□□ -1.63
RBM39-225ENST00000465158 ZFP2Q6ZN57 461 aa4.84□□□□□ -1.63
RBM39-225ENST00000465158 OR10AG1Q8NH19 301 aa4.84□□□□□ -1.63
RBM39-225ENST00000465158 RNASE8Q8TDE3 154 aaKnown RBP4.84□□□□□ -1.63
RBM39-225ENST00000465158 WFDC10AQ9H1F0 79 aa4.84□□□□□ -1.63
RBM39-225ENST00000465158 TRRAPQ9Y4A5 3859 aa4.83□□□□□ -1.64
RBM39-225ENST00000465158 K7EMI3 77 aa4.83□□□□□ -1.64
RBM39-225ENST00000465158 TRGC2P03986 189 aa4.83□□□□□ -1.64
RBM39-225ENST00000465158 FRMD6-AS1P0C7T7 363 aa4.83□□□□□ -1.64
RBM39-225ENST00000465158 AZU1P20160 251 aa4.83□□□□□ -1.64
RBM39-225ENST00000465158 CKS2P33552 79 aa4.83□□□□□ -1.64
RBM39-225ENST00000465158 OR10J3Q5JRS4 329 aa4.83□□□□□ -1.64
RBM39-225ENST00000465158 ZNF575Q86XF7 245 aa4.83□□□□□ -1.64
RBM39-225ENST00000465158 ORMDL3Q8N138 153 aa4.83□□□□□ -1.64
RBM39-225ENST00000465158 C11orf72Q8NBR9 251 aa4.83□□□□□ -1.64
RBM39-225ENST00000465158 OR11H2Q8NH07 326 aa4.83□□□□□ -1.64
RBM39-225ENST00000465158 C18orf15Q96N68 181 aa4.83□□□□□ -1.64
RBM39-225ENST00000465158 GSN-AS1Q9NRJ2 163 aa4.83□□□□□ -1.64
RBM39-225ENST00000465158 MDFICQ9P1T7 246 aa4.83□□□□□ -1.64
RBM39-225ENST00000465158 NBEAL1Q6ZS30 2694 aa4.82□□□□□ -1.64
RBM39-225ENST00000465158 MGAM2Q2M2H8 2515 aa4.82□□□□□ -1.64
RBM39-225ENST00000465158 TRAV4A0A0B4J268 109 aa4.82□□□□□ -1.64
RBM39-225ENST00000465158 LINC01549A6NIU2 74 aa4.82□□□□□ -1.64
RBM39-225ENST00000465158 NHLRC4P0CG21 123 aaPredicted RBP4.82□□□□□ -1.64
RBM39-225ENST00000465158 SPART-AS1P0CW21 52 aa4.82□□□□□ -1.64
RBM39-225ENST00000465158 RBMY1A1P0DJD3 496 aaKnown RBP4.82□□□□□ -1.64
RBM39-225ENST00000465158 RBMY1CP0DJD4 496 aa4.82□□□□□ -1.64
RBM39-225ENST00000465158 RAB4AP20338 218 aa4.82□□□□□ -1.64
RBM39-225ENST00000465158 RBMY1FQ15415 496 aaKnown RBP4.82□□□□□ -1.64
RBM39-225ENST00000465158 DEFB135Q30KP9 77 aa4.82□□□□□ -1.64
RBM39-225ENST00000465158 DEFB121Q5J5C9 76 aa4.82□□□□□ -1.64
RBM39-225ENST00000465158 EDA2RQ9HAV5 297 aa4.82□□□□□ -1.64
RBM39-225ENST00000465158 ANK2Q01484 3957 aa4.81□□□□□ -1.64
RBM39-225ENST00000465158 TRGV2A0A075B6R0 118 aa4.81□□□□□ -1.64
RBM39-225ENST00000465158 TRGV1A0A0A0MS02 117 aa4.81□□□□□ -1.64
RBM39-225ENST00000465158 F5H697 171 aa4.81□□□□□ -1.64
RBM39-225ENST00000465158 RS1O15537 224 aa4.81□□□□□ -1.64
RBM39-225ENST00000465158 PMCHP20382 165 aa4.81□□□□□ -1.64
RBM39-225ENST00000465158 EVI2AP22794 236 aa4.81□□□□□ -1.64
RBM39-225ENST00000465158 Q0VG73 95 aa4.81□□□□□ -1.64
RBM39-225ENST00000465158 Q6ZQT7 251 aa4.81□□□□□ -1.64
RBM39-225ENST00000465158 C14orf178Q8N769 122 aaPredicted RBP4.81□□□□□ -1.64
RBM39-225ENST00000465158 POM121L12Q8N7R1 296 aa4.81□□□□□ -1.64
RBM39-225ENST00000465158 OR4C5Q8NGB2 326 aa4.81□□□□□ -1.64
RBM39-225ENST00000465158 DNAJC30Q96LL9 226 aa4.81□□□□□ -1.64
RBM39-225ENST00000465158 PRELID3AQ96N28 172 aa4.81□□□□□ -1.64
RBM39-225ENST00000465158 C20orf78Q9BR46 151 aa4.81□□□□□ -1.64
RBM39-225ENST00000465158 C11orf68Q9H3H3 251 aaKnown RBP4.81□□□□□ -1.64
RBM39-225ENST00000465158 NOP10Q9NPE3 64 aaKnown RBP4.81□□□□□ -1.64
RBM39-225ENST00000465158 NXT2Q9NPJ8 142 aaKnown RBP4.81□□□□□ -1.64
RBM39-225ENST00000465158 U3KQK5 164 aa4.81□□□□□ -1.64
RBM39-225ENST00000465158 NOTCH1P46531 2555 aa4.81□□□□□ -1.64
RBM39-225ENST00000465158 NACAE9PAV3 2078 aa4.81□□□□□ -1.64
RBM39-225ENST00000465158 TRBV10-1A0A0K0K1A3 114 aa4.8□□□□□ -1.64
RBM39-225ENST00000465158 PRSS47A8MTI9 375 aa4.8□□□□□ -1.64
RBM39-225ENST00000465158 SSTP61278 116 aa4.8□□□□□ -1.64
RBM39-225ENST00000465158 RPL32P62910 135 aaKnown RBP4.8□□□□□ -1.64
RBM39-225ENST00000465158 MRPL51Q4U2R6 128 aaKnown RBP4.8□□□□□ -1.64
RBM39-225ENST00000465158 BAGE3Q86Y29 109 aa4.8□□□□□ -1.64
RBM39-225ENST00000465158 AMN1Q8IY45 258 aa4.8□□□□□ -1.64
RBM39-225ENST00000465158 CHCHD1Q96BP2 118 aaKnown RBP4.8□□□□□ -1.64
RBM39-225ENST00000465158 ALKBH7Q9BT30 221 aaPredicted RBP4.8□□□□□ -1.64
RBM39-225ENST00000465158 MAP1LC3AQ9H492 121 aa4.8□□□□□ -1.64
RBM39-225ENST00000465158 MSRB1Q9NZV6 116 aa4.8□□□□□ -1.64
RBM39-225ENST00000465158 MUC21A0A0G2JKD1 596 aa4.79□□□□□ -1.64
RBM39-225ENST00000465158 MUC21A0A140T8X8 626 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms