RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 Q96NJ1 140 aa-0.07□□□□□ -2.42
NUCKS1-202ENST00000464938 PRR15LQ9BU68 103 aa-0.07□□□□□ -2.42
NUCKS1-202ENST00000464938 DMBT1Q9UGM3 2413 aaPredicted RBP-0.07□□□□□ -2.42
NUCKS1-202ENST00000464938 RBAKDNA6NC62 111 aa-0.08□□□□□ -2.42
NUCKS1-202ENST00000464938 F2Z2F3 143 aa-0.08□□□□□ -2.42
NUCKS1-202ENST00000464938 DR1Q01658 176 aa-0.08□□□□□ -2.42
NUCKS1-202ENST00000464938 SSBP1Q04837 148 aaKnown RBP-0.08□□□□□ -2.42
NUCKS1-202ENST00000464938 Q5BKY6 102 aa-0.08□□□□□ -2.42
NUCKS1-202ENST00000464938 LINC01545Q5VT33 79 aa-0.08□□□□□ -2.42
NUCKS1-202ENST00000464938 CYP2G1PQ6ZSU1 146 aa-0.08□□□□□ -2.42
NUCKS1-202ENST00000464938 AKAP14Q86UN6 197 aa-0.08□□□□□ -2.42
NUCKS1-202ENST00000464938 SMIM11BQ8TCY0 68 aa-0.08□□□□□ -2.42
NUCKS1-202ENST00000464938 KIF13AQ9H1H9 1805 aa-0.08□□□□□ -2.42
NUCKS1-202ENST00000464938 ASXL3Q9C0F0 2248 aa-0.09□□□□□ -2.42
NUCKS1-202ENST00000464938 IGF2RP11717 2491 aa-0.09□□□□□ -2.42
NUCKS1-202ENST00000464938 DISP2A7MBM2 1401 aa-0.09□□□□□ -2.42
NUCKS1-202ENST00000464938 FAM236AA0A1B0GUQ0 79 aa-0.09□□□□□ -2.42
NUCKS1-202ENST00000464938 FAM236BA0A1B0GV22 79 aa-0.09□□□□□ -2.42
NUCKS1-202ENST00000464938 PITX3O75364 302 aa-0.09□□□□□ -2.42
NUCKS1-202ENST00000464938 VSTM2AQ8TAG5 236 aa-0.09□□□□□ -2.42
NUCKS1-202ENST00000464938 COX7B2Q8TF08 81 aa-0.09□□□□□ -2.42
NUCKS1-202ENST00000464938 PYDC1Q8WXC3 89 aa-0.09□□□□□ -2.42
NUCKS1-202ENST00000464938 AIF1LQ9BQI0 150 aa-0.09□□□□□ -2.42
NUCKS1-202ENST00000464938 NDUFA12Q9UI09 145 aa-0.09□□□□□ -2.42
NUCKS1-202ENST00000464938 OTOGQ6ZRI0 2925 aa-0.09□□□□□ -2.42
NUCKS1-202ENST00000464938 KIAA0100Q14667 2235 aaKnown RBP-0.09□□□□□ -2.42
NUCKS1-202ENST00000464938 MUC22E2RYF6 1773 aaPredicted RBP-0.09□□□□□ -2.42
NUCKS1-202ENST00000464938 CELSR2Q9HCU4 2923 aa-0.1□□□□□ -2.42
NUCKS1-202ENST00000464938 NRXN2Q9P2S2 1712 aa-0.1□□□□□ -2.42
NUCKS1-202ENST00000464938 F8P00451 2351 aa-0.1□□□□□ -2.42
NUCKS1-202ENST00000464938 PHIPQ8WWQ0 1821 aa-0.1□□□□□ -2.43
NUCKS1-202ENST00000464938 TRAV12-3A0A0B4J271 114 aa-0.1□□□□□ -2.43
NUCKS1-202ENST00000464938 ARPC5O15511 151 aa-0.1□□□□□ -2.43
NUCKS1-202ENST00000464938 NCR2O95944 276 aa-0.1□□□□□ -2.43
NUCKS1-202ENST00000464938 SPINK1P00995 79 aa-0.1□□□□□ -2.43
NUCKS1-202ENST00000464938 IGLC6P0CF74 106 aa-0.1□□□□□ -2.43
NUCKS1-202ENST00000464938 COX4I1P13073 169 aa-0.1□□□□□ -2.43
NUCKS1-202ENST00000464938 HIST1H1AQ02539 215 aaPredicted RBP-0.1□□□□□ -2.43
NUCKS1-202ENST00000464938 C4orf33Q8N1A6 199 aa-0.1□□□□□ -2.43
NUCKS1-202ENST00000464938 SPRR2GQ9BYE4 73 aa-0.1□□□□□ -2.43
NUCKS1-202ENST00000464938 TMEM242Q9NWH2 141 aa-0.1□□□□□ -2.43
NUCKS1-202ENST00000464938 COL7A1Q02388 2944 aa-0.1□□□□□ -2.43
NUCKS1-202ENST00000464938 ARHGEF10O15013 1369 aa-0.1□□□□□ -2.43
NUCKS1-202ENST00000464938 MYO7AQ13402 2215 aa-0.1□□□□□ -2.43
NUCKS1-202ENST00000464938 CEP152O94986 1710 aa-0.1□□□□□ -2.43
NUCKS1-202ENST00000464938 UNC79Q9P2D8 2635 aa-0.11□□□□□ -2.43
NUCKS1-202ENST00000464938 SIPA1L3O60292 1781 aaPredicted RBP-0.11□□□□□ -2.43
NUCKS1-202ENST00000464938 CLPSL1A2RUU4 121 aa-0.11□□□□□ -2.43
NUCKS1-202ENST00000464938 NMBP08949 121 aa-0.11□□□□□ -2.43
NUCKS1-202ENST00000464938 NCS1P62166 190 aa-0.11□□□□□ -2.43
NUCKS1-202ENST00000464938 SPCS2Q15005 226 aa-0.11□□□□□ -2.43
NUCKS1-202ENST00000464938 MIC13Q5XKP0 118 aa-0.11□□□□□ -2.43
NUCKS1-202ENST00000464938 SLC48A1Q6P1K1 146 aa-0.11□□□□□ -2.43
NUCKS1-202ENST00000464938 C20orf197Q8N268 126 aa-0.11□□□□□ -2.43
NUCKS1-202ENST00000464938 MMGT1Q8N4V1 131 aa-0.11□□□□□ -2.43
NUCKS1-202ENST00000464938 SAR1AQ9NR31 198 aa-0.11□□□□□ -2.43
NUCKS1-202ENST00000464938 UNC13AQ9UPW8 1703 aa-0.11□□□□□ -2.43
NUCKS1-202ENST00000464938 TMEM2Q9UHN6 1383 aa-0.11□□□□□ -2.43
NUCKS1-202ENST00000464938 GOLGA3Q08378 1498 aa-0.11□□□□□ -2.43
NUCKS1-202ENST00000464938 AKAP11Q9UKA4 1901 aa-0.11□□□□□ -2.43
NUCKS1-202ENST00000464938 CELSR1Q9NYQ6 3014 aa-0.11□□□□□ -2.43
NUCKS1-202ENST00000464938 CADP27708 2225 aa-0.11□□□□□ -2.43
NUCKS1-202ENST00000464938 FHAD1B1AJZ9 1412 aa-0.12□□□□□ -2.43
NUCKS1-202ENST00000464938 TRBV7-1A0A0A6YYK4 115 aa-0.12□□□□□ -2.43
NUCKS1-202ENST00000464938 APODP05090 189 aa-0.12□□□□□ -2.43
NUCKS1-202ENST00000464938 LINC00694P0DN24 101 aa-0.12□□□□□ -2.43
NUCKS1-202ENST00000464938 CKS1BP61024 79 aa-0.12□□□□□ -2.43
NUCKS1-202ENST00000464938 COX6A2Q02221 97 aa-0.12□□□□□ -2.43
NUCKS1-202ENST00000464938 FAM74A4Q5TZK3 123 aa-0.12□□□□□ -2.43
NUCKS1-202ENST00000464938 SPANXN1Q5VSR9 72 aa-0.12□□□□□ -2.43
NUCKS1-202ENST00000464938 DAPK1P53355 1430 aa-0.13□□□□□ -2.43
NUCKS1-202ENST00000464938 CACNA1CQ13936 2221 aa-0.13□□□□□ -2.43
NUCKS1-202ENST00000464938 CACNA1AO00555 2505 aa-0.13□□□□□ -2.43
NUCKS1-202ENST00000464938 CDK5RAP2Q96SN8 1893 aa-0.13□□□□□ -2.43
NUCKS1-202ENST00000464938 IBTKQ9P2D0 1353 aaPredicted RBP-0.13□□□□□ -2.43
NUCKS1-202ENST00000464938 TMEM14DPA8MWL7 114 aa-0.13□□□□□ -2.43
NUCKS1-202ENST00000464938 M0R129 80 aa-0.13□□□□□ -2.43
NUCKS1-202ENST00000464938 PIRTP0C851 137 aa-0.13□□□□□ -2.43
NUCKS1-202ENST00000464938 UBE2D1P51668 147 aa-0.13□□□□□ -2.43
NUCKS1-202ENST00000464938 INSL4Q14641 139 aa-0.13□□□□□ -2.43
NUCKS1-202ENST00000464938 ALX1Q15699 326 aa-0.13□□□□□ -2.43
NUCKS1-202ENST00000464938 C9orf116Q5BN46 136 aaPredicted RBP-0.13□□□□□ -2.43
NUCKS1-202ENST00000464938 Q6ZRX8 168 aa-0.13□□□□□ -2.43
NUCKS1-202ENST00000464938 Q6ZUT4 128 aa-0.13□□□□□ -2.43
NUCKS1-202ENST00000464938 C10orf82Q8WW14 230 aa-0.13□□□□□ -2.43
NUCKS1-202ENST00000464938 GSKIPQ9P0R6 139 aa-0.13□□□□□ -2.43
NUCKS1-202ENST00000464938 V9GYV3 84 aa-0.13□□□□□ -2.43
NUCKS1-202ENST00000464938 MYOM3Q5VTT5 1437 aa-0.13□□□□□ -2.43
NUCKS1-202ENST00000464938 UBR5O95071 2799 aaPredicted RBP-0.14□□□□□ -2.43
NUCKS1-202ENST00000464938 PXDNQ92626 1479 aa-0.14□□□□□ -2.43
NUCKS1-202ENST00000464938 TRGV1A0A0A0MS02 117 aa-0.14□□□□□ -2.43
NUCKS1-202ENST00000464938 G3V318 75 aa-0.14□□□□□ -2.43
NUCKS1-202ENST00000464938 ACYP2P14621 99 aa-0.14□□□□□ -2.43
NUCKS1-202ENST00000464938 EDDM3BP56851 147 aa-0.14□□□□□ -2.43
NUCKS1-202ENST00000464938 CTAGE3PQ8IX95 158 aa-0.14□□□□□ -2.43
NUCKS1-202ENST00000464938 SMIM3Q9BZL3 60 aa-0.14□□□□□ -2.43
NUCKS1-202ENST00000464938 U3KQA8 63 aa-0.14□□□□□ -2.43
NUCKS1-202ENST00000464938 MACF1Q9UPN3 7388 aaKnown RBP-0.14□□□□□ -2.43
NUCKS1-202ENST00000464938 ANKRD17O75179 2603 aaKnown RBP-0.15□□□□□ -2.43
NUCKS1-202ENST00000464938 MYH13Q9UKX3 1938 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms