RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 PRR34Q9NV39 138 aa5.7□□□□□ -1.5
APP-213ENST00000464867 TRAV8-4A0A0B4J246 113 aa5.69□□□□□ -1.5
APP-213ENST00000464867 F6UZH7 168 aa5.69□□□□□ -1.5
APP-213ENST00000464867 P01737 135 aa5.69□□□□□ -1.5
APP-213ENST00000464867 GZMBP10144 247 aa5.69□□□□□ -1.5
APP-213ENST00000464867 UBE2D1P51668 147 aa5.69□□□□□ -1.5
APP-213ENST00000464867 TAS2R30P59541 319 aa5.69□□□□□ -1.5
APP-213ENST00000464867 PIK3CD-AS1Q5SR53 167 aa5.69□□□□□ -1.5
APP-213ENST00000464867 TRBV7-3A0A075B6L6 115 aa5.68□□□□□ -1.5
APP-213ENST00000464867 TRBV10-1A0A0K0K1A3 114 aa5.68□□□□□ -1.5
APP-213ENST00000464867 PTTG1O95997 202 aa5.68□□□□□ -1.5
APP-213ENST00000464867 MT-ND6P03923 174 aa5.68□□□□□ -1.5
APP-213ENST00000464867 S100A4P26447 101 aaKnown RBP5.68□□□□□ -1.5
APP-213ENST00000464867 RPL13AP40429 203 aaKnown RBP5.68□□□□□ -1.5
APP-213ENST00000464867 SUMO2P61956 95 aaKnown RBP5.68□□□□□ -1.5
APP-213ENST00000464867 ARL16Q0P5N6 197 aa5.68□□□□□ -1.5
APP-213ENST00000464867 FAM74A4Q5TZK3 123 aa5.68□□□□□ -1.5
APP-213ENST00000464867 CMTM2Q8TAZ6 248 aa5.68□□□□□ -1.5
APP-213ENST00000464867 PHYHIPLQ96FC7 376 aa5.68□□□□□ -1.5
APP-213ENST00000464867 HYLS1Q96M11 299 aa5.68□□□□□ -1.5
APP-213ENST00000464867 NDFIP1Q9BT67 221 aa5.68□□□□□ -1.5
APP-213ENST00000464867 SLC25A2Q9BXI2 301 aa5.68□□□□□ -1.5
APP-213ENST00000464867 A0A096LNI7 61 aa5.67□□□□□ -1.5
APP-213ENST00000464867 SFT2D2O95562 160 aa5.67□□□□□ -1.5
APP-213ENST00000464867 UBE2D3P61077 147 aa5.67□□□□□ -1.5
APP-213ENST00000464867 UBE2D2P62837 147 aa5.67□□□□□ -1.5
APP-213ENST00000464867 REG3AQ06141 175 aa5.67□□□□□ -1.5
APP-213ENST00000464867 BAXQ07812 192 aa5.67□□□□□ -1.5
APP-213ENST00000464867 FAM74A1Q5RGS3 127 aa5.67□□□□□ -1.5
APP-213ENST00000464867 SMIM4Q8WVI0 70 aa5.67□□□□□ -1.5
APP-213ENST00000464867 SLIRPQ9GZT3 109 aaKnown RBP5.67□□□□□ -1.5
APP-213ENST00000464867 LYRM2Q9NU23 88 aaPredicted RBP5.67□□□□□ -1.5
APP-213ENST00000464867 UQCC1Q9NVA1 299 aa5.67□□□□□ -1.5
APP-213ENST00000464867 RAB26Q9ULW5 256 aa5.67□□□□□ -1.5
APP-213ENST00000464867 L7N2F9 121 aa5.66□□□□□ -1.5
APP-213ENST00000464867 RAB5CP51148 216 aa5.66□□□□□ -1.5
APP-213ENST00000464867 RBX1P62877 108 aa5.66□□□□□ -1.5
APP-213ENST00000464867 VAMP2P63027 116 aa5.66□□□□□ -1.5
APP-213ENST00000464867 UFSP1Q6NVU6 142 aa5.66□□□□□ -1.5
APP-213ENST00000464867 FXYD5Q96DB9 178 aa5.66□□□□□ -1.5
APP-213ENST00000464867 WDR83OSQ9Y284 106 aa5.66□□□□□ -1.5
APP-213ENST00000464867 TRAV6A0A075B6T7 132 aa5.65□□□□□ -1.5
APP-213ENST00000464867 ANKRD20A5PA0PJZ0 165 aa5.65□□□□□ -1.5
APP-213ENST00000464867 OR7C2O60412 319 aa5.65□□□□□ -1.5
APP-213ENST00000464867 TSPAN13O95857 204 aa5.65□□□□□ -1.5
APP-213ENST00000464867 RNASE3P12724 160 aaKnown RBP5.65□□□□□ -1.5
APP-213ENST00000464867 FAUP35544 74 aaKnown RBP5.65□□□□□ -1.5
APP-213ENST00000464867 BCAP31P51572 246 aa5.65□□□□□ -1.5
APP-213ENST00000464867 TMEM97Q5BJF2 176 aa5.65□□□□□ -1.5
APP-213ENST00000464867 C1orf137Q5JT78 98 aa5.65□□□□□ -1.5
APP-213ENST00000464867 MIR17HGQ75NE6 70 aa5.65□□□□□ -1.5
APP-213ENST00000464867 Q8N9P0 234 aaPredicted RBP5.65□□□□□ -1.5
APP-213ENST00000464867 DIRAS2Q96HU8 199 aa5.65□□□□□ -1.5
APP-213ENST00000464867 FAM167A-AS1Q96KT0 104 aa5.65□□□□□ -1.5
APP-213ENST00000464867 BCL7BQ9BQE9 202 aa5.65□□□□□ -1.5
APP-213ENST00000464867 MIXL1Q9H2W2 232 aa5.65□□□□□ -1.5
APP-213ENST00000464867 JPT2Q9H910 190 aa5.65□□□□□ -1.5
APP-213ENST00000464867 UBE2L5PA0A1B0GUS4 154 aa5.64□□□□□ -1.51
APP-213ENST00000464867 FAM24AA6NFZ4 105 aa5.64□□□□□ -1.51
APP-213ENST00000464867 RGS5O15539 181 aa5.64□□□□□ -1.51
APP-213ENST00000464867 RAB2AP61019 212 aa5.64□□□□□ -1.51
APP-213ENST00000464867 NCS1P62166 190 aa5.64□□□□□ -1.51
APP-213ENST00000464867 PPP1R1AQ13522 171 aa5.64□□□□□ -1.51
APP-213ENST00000464867 IL18Q14116 193 aa5.64□□□□□ -1.51
APP-213ENST00000464867 ZFP69Q49AA0 526 aa5.64□□□□□ -1.51
APP-213ENST00000464867 SPANXN2Q5MJ10 180 aa5.64□□□□□ -1.51
APP-213ENST00000464867 GOLT1AQ6ZVE7 132 aa5.64□□□□□ -1.51
APP-213ENST00000464867 ARL6IP6Q8N6S5 226 aa5.64□□□□□ -1.51
APP-213ENST00000464867 MCFD2Q8NI22 146 aa5.64□□□□□ -1.51
APP-213ENST00000464867 SUN5Q8TC36 379 aa5.64□□□□□ -1.51
APP-213ENST00000464867 OR5AC2Q9NZP5 309 aa5.64□□□□□ -1.51
APP-213ENST00000464867 C7orf66A4D0T2 115 aa5.63□□□□□ -1.51
APP-213ENST00000464867 FGF7P21781 194 aa5.63□□□□□ -1.51
APP-213ENST00000464867 VBP1P61758 197 aa5.63□□□□□ -1.51
APP-213ENST00000464867 UBE2L3P68036 154 aaKnown RBP5.63□□□□□ -1.51
APP-213ENST00000464867 GAGE6Q13070 117 aa5.63□□□□□ -1.51
APP-213ENST00000464867 GCSAMLQ5JQS6 135 aa5.63□□□□□ -1.51
APP-213ENST00000464867 TVP23CQ96ET8 276 aa5.63□□□□□ -1.51
APP-213ENST00000464867 Q9H521 79 aa5.63□□□□□ -1.51
APP-213ENST00000464867 VCX3AQ9NNX9 186 aa5.63□□□□□ -1.51
APP-213ENST00000464867 GSKIPQ9P0R6 139 aa5.63□□□□□ -1.51
APP-213ENST00000464867 H0Y9J4 135 aa5.62□□□□□ -1.51
APP-213ENST00000464867 CST7O76096 145 aa5.62□□□□□ -1.51
APP-213ENST00000464867 GCGP01275 180 aa5.62□□□□□ -1.51
APP-213ENST00000464867 S100A11P31949 105 aa5.62□□□□□ -1.51
APP-213ENST00000464867 IAH1Q2TAA2 248 aaPredicted RBP5.62□□□□□ -1.51
APP-213ENST00000464867 HIGD2BQ4VC39 106 aa5.62□□□□□ -1.51
APP-213ENST00000464867 MITD1Q8WV92 249 aa5.62□□□□□ -1.51
APP-213ENST00000464867 SLC25A21Q9BQT8 299 aaPredicted RBP5.62□□□□□ -1.51
APP-213ENST00000464867 GFRA4Q9GZZ7 299 aa5.62□□□□□ -1.51
APP-213ENST00000464867 OTORQ9NRC9 128 aa5.62□□□□□ -1.51
APP-213ENST00000464867 TRBV25-1A0A075B6N4 114 aa5.61□□□□□ -1.51
APP-213ENST00000464867 NPSP0C0P6 89 aa5.61□□□□□ -1.51
APP-213ENST00000464867 CRYGAP11844 174 aa5.61□□□□□ -1.51
APP-213ENST00000464867 ZNF80P51504 273 aaPredicted RBP5.61□□□□□ -1.51
APP-213ENST00000464867 EIF5AP63241 154 aaKnown RBP5.61□□□□□ -1.51
APP-213ENST00000464867 HBG1P69891 147 aa5.61□□□□□ -1.51
APP-213ENST00000464867 HBG2P69892 147 aa5.61□□□□□ -1.51
APP-213ENST00000464867 CTF1Q16619 201 aa5.61□□□□□ -1.51
APP-213ENST00000464867 C15orf56Q8N910 161 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms