RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 RNF182Q8N6D2 247 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 FAM110DQ8TAY7 271 aaPredicted RBP2.73□□□□□ -1.97
COL8A1-205ENST00000463753 RNF185Q96GF1 192 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 UPK3BQ9BT76 320 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 SPANXDQ9BXN6 97 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 TMEM14BQ9NUH8 114 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 MRPL36Q9P0J6 103 aaKnown RBP2.73□□□□□ -1.97
COL8A1-205ENST00000463753 TP53TG1Q9Y2A0 90 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 ICOSQ9Y6W8 199 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 FRYLO94915 3013 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 TRAV12-2A0A075B6T6 113 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 A0A0B4J2C4 111 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 USP17L23D6RBM5 183 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 ORMDL2Q53FV1 153 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 C5orf38Q86SI9 138 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 SLC50A1Q9BRV3 221 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 PRR14LQ5THK1 2151 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 LAMA1P25391 3075 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 PRUNE2Q8WUY3 3088 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 MYO9AB2RTY4 2548 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 PTPN13Q12923 2485 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 CELSR3Q9NYQ7 3312 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 DCHS1Q96JQ0 3298 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 MGAQ8IWI9 3026 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 A0A1W2PPC4 97 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 C11orf86A6NJI1 115 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 CGB1A6NKQ9 187 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 FAM223BA6NKX1 122 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 J3QT63 122 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 EGR2P11161 476 aaPredicted RBP2.73□□□□□ -1.97
COL8A1-205ENST00000463753 GP9P14770 177 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 CXCL5P42830 114 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 NDPQ00604 133 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 PRCDQ00LT1 54 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 HIST2H2BCQ6DN03 193 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 HIST2H2BDQ6DRA6 164 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 ZNF826PQ6ZT77 177 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 SLC25A29Q8N8R3 303 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 Q8TAT8 98 aa2.73□□□□□ -1.97
COL8A1-205ENST00000463753 PTPRZ1P23471 2315 aaPredicted RBP2.72□□□□□ -1.97
COL8A1-205ENST00000463753 TRBV19A0A075B6N1 114 aa2.72□□□□□ -1.97
COL8A1-205ENST00000463753 KNCNA6PVL3 124 aa2.72□□□□□ -1.97
COL8A1-205ENST00000463753 SS18L1O75177 396 aaPredicted RBP2.72□□□□□ -1.97
COL8A1-205ENST00000463753 FSTL3O95633 263 aa2.72□□□□□ -1.97
COL8A1-205ENST00000463753 TRGV3P03979 118 aa2.72□□□□□ -1.97
COL8A1-205ENST00000463753 ERHP84090 104 aaKnown RBP2.72□□□□□ -1.97
COL8A1-205ENST00000463753 C10orf55Q5SWW7 151 aa2.72□□□□□ -1.97
COL8A1-205ENST00000463753 RUSC1-AS1Q66K80 236 aa2.72□□□□□ -1.97
COL8A1-205ENST00000463753 FP248Q71RG6 208 aaPredicted RBP2.72□□□□□ -1.97
COL8A1-205ENST00000463753 SRXN1Q9BYN0 137 aa2.72□□□□□ -1.97
COL8A1-205ENST00000463753 C16orf95Q9H693 158 aa2.72□□□□□ -1.97
COL8A1-205ENST00000463753 SERP1Q9Y6X1 66 aa2.72□□□□□ -1.97
COL8A1-205ENST00000463753 FER1L5A0AVI2 2057 aa2.72□□□□□ -1.97
COL8A1-205ENST00000463753 IGKV2-40A0A087WW87 121 aaPredicted RBP2.72□□□□□ -1.97
COL8A1-205ENST00000463753 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.72□□□□□ -1.97
COL8A1-205ENST00000463753 TRAV12-1A0A0B4J245 112 aa2.72□□□□□ -1.97
COL8A1-205ENST00000463753 TMEM223A0PJW6 202 aa2.72□□□□□ -1.97
COL8A1-205ENST00000463753 TIMM17BO60830 172 aa2.72□□□□□ -1.97
COL8A1-205ENST00000463753 IGKV2D-40P01614 121 aaPredicted RBP2.72□□□□□ -1.97
COL8A1-205ENST00000463753 IGKV1-16P04430 117 aa2.72□□□□□ -1.97
COL8A1-205ENST00000463753 SNRPD3P62318 126 aaKnown RBP2.72□□□□□ -1.97
COL8A1-205ENST00000463753 HCP5Q6MZN7 132 aa2.72□□□□□ -1.97
COL8A1-205ENST00000463753 IGFL2Q6UWQ7 119 aa2.72□□□□□ -1.97
COL8A1-205ENST00000463753 GFRALQ6UXV0 394 aa2.72□□□□□ -1.97
COL8A1-205ENST00000463753 SEC16AO15027 2179 aa2.72□□□□□ -1.97
COL8A1-205ENST00000463753 IGKV1D-37A0A075B6S9 117 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 TRAV23DV6A0A075B6W5 121 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 SMIM26A0A096LP01 95 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 IGKV3D-11A0A0A0MRZ8 115 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 TRBV30A0A0K0K1B3 111 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.71□□□□□ -1.98
COL8A1-205ENST00000463753 RBMY1BA6NDE4 496 aaKnown RBP2.71□□□□□ -1.98
COL8A1-205ENST00000463753 RBMY1EA6NEQ0 496 aaKnown RBP2.71□□□□□ -1.98
COL8A1-205ENST00000463753 M0R1W7 72 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 RBMY1DP0C7P1 496 aaKnown RBP2.71□□□□□ -1.98
COL8A1-205ENST00000463753 RBMY1A1P0DJD3 496 aaKnown RBP2.71□□□□□ -1.98
COL8A1-205ENST00000463753 RBMY1CP0DJD4 496 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 LIFP15018 202 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 MAGEA5P43359 124 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 SLURP1P55000 103 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 DAZ2Q13117 558 aaKnown RBP2.71□□□□□ -1.98
COL8A1-205ENST00000463753 RBMY1FQ15415 496 aaKnown RBP2.71□□□□□ -1.98
COL8A1-205ENST00000463753 SOSTDC1Q6X4U4 206 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 WDR86Q86TI4 376 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 C17orf82Q86X59 251 aaPredicted RBP2.71□□□□□ -1.98
COL8A1-205ENST00000463753 DYNAPQ8N1N2 210 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 SLC25A45Q8N413 288 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 KLF14Q8TD94 323 aaPredicted RBP2.71□□□□□ -1.98
COL8A1-205ENST00000463753 TIMM21Q9BVV7 248 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 DAZ3Q9NR90 486 aaKnown RBP2.71□□□□□ -1.98
COL8A1-205ENST00000463753 REV3LO60673 3130 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 IGLV2-18A0A075B6J9 118 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 IGHV1-45A0A0A0MS14 117 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 IGHV5-51A0A0C4DH38 117 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 E7EUB6 86 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 I3L3M4 83 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 LST1O00453 97 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 SCRG1O75711 98 aa2.71□□□□□ -1.98
COL8A1-205ENST00000463753 SAA2P0DJI9 122 aaPredicted RBP2.71□□□□□ -1.98
COL8A1-205ENST00000463753 DEFB121Q5J5C9 76 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms