RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 KCNIP4Q6PIL6 250 aa13.43□□□□□ -0.26
CPSF7-209ENST00000463244 HSD17B11Q8NBQ5 300 aa13.43□□□□□ -0.26
CPSF7-209ENST00000463244 B4DEV8 164 aa13.42□□□□□ -0.26
CPSF7-209ENST00000463244 ARMS2P0C7Q2 107 aa13.42□□□□□ -0.26
CPSF7-209ENST00000463244 OR11H4Q8NGC9 324 aa13.42□□□□□ -0.26
CPSF7-209ENST00000463244 DAZAP1Q96EP5 407 aaKnown RBP13.42□□□□□ -0.26
CPSF7-209ENST00000463244 PSMG3Q9BT73 122 aaPredicted RBP13.42□□□□□ -0.26
CPSF7-209ENST00000463244 C1orf43Q9BWL3 253 aa13.42□□□□□ -0.26
CPSF7-209ENST00000463244 A0A1W2PRE2 83 aa13.41□□□□□ -0.26
CPSF7-209ENST00000463244 CXorf1O96002 111 aa13.41□□□□□ -0.26
CPSF7-209ENST00000463244 A0A087WWL8 130 aa13.4□□□□□ -0.26
CPSF7-209ENST00000463244 TRBV10-1A0A0K0K1A3 114 aa13.4□□□□□ -0.26
CPSF7-209ENST00000463244 KRBOX1C9JBD0 128 aa13.4□□□□□ -0.26
CPSF7-209ENST00000463244 MBP02144 154 aa13.4□□□□□ -0.26
CPSF7-209ENST00000463244 ATP6V0CP27449 155 aa13.4□□□□□ -0.26
CPSF7-209ENST00000463244 UBE2D3P61077 147 aa13.4□□□□□ -0.26
CPSF7-209ENST00000463244 UBE2D2P62837 147 aa13.4□□□□□ -0.26
CPSF7-209ENST00000463244 SFRP2Q96HF1 295 aa13.4□□□□□ -0.26
CPSF7-209ENST00000463244 LRP2P98164 4655 aa13.39□□□□□ -0.27
CPSF7-209ENST00000463244 CRIP1P50238 77 aa13.39□□□□□ -0.27
CPSF7-209ENST00000463244 SERF2P84101 59 aa13.39□□□□□ -0.27
CPSF7-209ENST00000463244 ENHOQ6UWT2 76 aa13.39□□□□□ -0.27
CPSF7-209ENST00000463244 Q86TA4 180 aa13.39□□□□□ -0.27
CPSF7-209ENST00000463244 M0R036 132 aa13.38□□□□□ -0.27
CPSF7-209ENST00000463244 RPL36AP83881 106 aaKnown RBP13.38□□□□□ -0.27
CPSF7-209ENST00000463244 RPL36ALQ969Q0 106 aaKnown RBP13.38□□□□□ -0.27
CPSF7-209ENST00000463244 ACTR3CQ9C0K3 210 aaPredicted RBP13.38□□□□□ -0.27
CPSF7-209ENST00000463244 PHLDA3Q9Y5J5 127 aa13.38□□□□□ -0.27
CPSF7-209ENST00000463244 TRBV7-3A0A075B6L6 115 aa13.37□□□□□ -0.27
CPSF7-209ENST00000463244 GRIFINA4D1Z8 144 aa13.37□□□□□ -0.27
CPSF7-209ENST00000463244 TMEM262E9PQX1 116 aa13.37□□□□□ -0.27
CPSF7-209ENST00000463244 CRPP02741 224 aa13.37□□□□□ -0.27
CPSF7-209ENST00000463244 ZC2HC1AQ96GY0 325 aa13.37□□□□□ -0.27
CPSF7-209ENST00000463244 TNFSF18Q9UNG2 199 aa13.37□□□□□ -0.27
CPSF7-209ENST00000463244 TRBV6-8A0A0A6YYG3 113 aa13.36□□□□□ -0.27
CPSF7-209ENST00000463244 USP17L23D6RBM5 183 aa13.36□□□□□ -0.27
CPSF7-209ENST00000463244 M0R381 172 aa13.36□□□□□ -0.27
CPSF7-209ENST00000463244 PEX7O00628 323 aa13.36□□□□□ -0.27
CPSF7-209ENST00000463244 IFNA7P01567 189 aa13.36□□□□□ -0.27
CPSF7-209ENST00000463244 COX8CQ7Z4L0 72 aa13.36□□□□□ -0.27
CPSF7-209ENST00000463244 C15orf54Q8N8G6 183 aa13.36□□□□□ -0.27
CPSF7-209ENST00000463244 TNXBP22105 4242 aa13.35□□□□□ -0.27
CPSF7-209ENST00000463244 SH2D1AO60880 128 aa13.35□□□□□ -0.27
CPSF7-209ENST00000463244 MT1HL1P0DM35 61 aa13.35□□□□□ -0.27
CPSF7-209ENST00000463244 TPT1P13693 172 aaKnown RBP13.35□□□□□ -0.27
CPSF7-209ENST00000463244 MPV17L2Q567V2 206 aa13.35□□□□□ -0.27
CPSF7-209ENST00000463244 OR10G8Q8NGN5 311 aa13.35□□□□□ -0.27
CPSF7-209ENST00000463244 HLA-DQA1P01909 254 aa13.34□□□□□ -0.27
CPSF7-209ENST00000463244 PRSS1P07477 247 aa13.34□□□□□ -0.27
CPSF7-209ENST00000463244 FAM162BQ5T6X4 162 aa13.34□□□□□ -0.27
CPSF7-209ENST00000463244 DGAT2L7PQ6IED9 249 aa13.34□□□□□ -0.27
CPSF7-209ENST00000463244 ZFP82Q8N141 532 aa13.34□□□□□ -0.27
CPSF7-209ENST00000463244 C9orf163Q8N9P6 203 aa13.34□□□□□ -0.27
CPSF7-209ENST00000463244 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.34□□□□□ -0.27
CPSF7-209ENST00000463244 UBE2G2P60604 165 aa13.33□□□□□ -0.28
CPSF7-209ENST00000463244 HIST1H2BAQ96A08 127 aa13.33□□□□□ -0.28
CPSF7-209ENST00000463244 AQP10Q96PS8 301 aa13.33□□□□□ -0.28
CPSF7-209ENST00000463244 ANGP03950 147 aaKnown RBP13.32□□□□□ -0.28
CPSF7-209ENST00000463244 ZNF726P1Q15940 193 aa13.32□□□□□ -0.28
CPSF7-209ENST00000463244 MIAQ16674 131 aa13.32□□□□□ -0.28
CPSF7-209ENST00000463244 LINC01559Q495D7 138 aa13.32□□□□□ -0.28
CPSF7-209ENST00000463244 ZFP30Q9Y2G7 519 aa13.32□□□□□ -0.28
CPSF7-209ENST00000463244 TMSB15BA0A087X1C1 80 aa13.31□□□□□ -0.28
CPSF7-209ENST00000463244 FAM74A7A6NL05 159 aa13.31□□□□□ -0.28
CPSF7-209ENST00000463244 PANO1I0J062 215 aa13.31□□□□□ -0.28
CPSF7-209ENST00000463244 ZNF674Q2M3X9 581 aa13.31□□□□□ -0.28
CPSF7-209ENST00000463244 NEXN-AS1Q8NBZ9 246 aa13.31□□□□□ -0.28
CPSF7-209ENST00000463244 NKX6-2Q9C056 277 aaPredicted RBP13.31□□□□□ -0.28
CPSF7-209ENST00000463244 CTXND1A0A1B0GTU2 59 aa13.29□□□□□ -0.28
CPSF7-209ENST00000463244 PTTG1O95997 202 aa13.29□□□□□ -0.28
CPSF7-209ENST00000463244 RAB4BP61018 213 aa13.29□□□□□ -0.28
CPSF7-209ENST00000463244 PKIAP61925 76 aa13.29□□□□□ -0.28
CPSF7-209ENST00000463244 Q6ZRU5 148 aa13.29□□□□□ -0.28
CPSF7-209ENST00000463244 FMC1Q96HJ9 113 aa13.29□□□□□ -0.28
CPSF7-209ENST00000463244 CHCHD5Q9BSY4 110 aa13.29□□□□□ -0.28
CPSF7-209ENST00000463244 DEFA1P59665 94 aa13.28□□□□□ -0.28
CPSF7-209ENST00000463244 DEFA3P59666 94 aa13.28□□□□□ -0.28
CPSF7-209ENST00000463244 RPL19P84098 196 aaKnown RBP13.28□□□□□ -0.28
CPSF7-209ENST00000463244 PRR27Q6MZM9 219 aa13.28□□□□□ -0.28
CPSF7-209ENST00000463244 SDIM1Q6ZPB5 146 aa13.28□□□□□ -0.28
CPSF7-209ENST00000463244 PRR34Q9NV39 138 aa13.28□□□□□ -0.28
CPSF7-209ENST00000463244 RNF213Q63HN8 5207 aa13.28□□□□□ -0.28
CPSF7-209ENST00000463244 UBE2G1P62253 170 aa13.27□□□□□ -0.29
CPSF7-209ENST00000463244 KRTAP26-1Q6PEX3 210 aa13.27□□□□□ -0.29
CPSF7-209ENST00000463244 LTAP01374 205 aa13.26□□□□□ -0.29
CPSF7-209ENST00000463244 ZNF56Q15929 161 aa13.26□□□□□ -0.29
CPSF7-209ENST00000463244 A0A0D9SG52 128 aa13.25□□□□□ -0.29
CPSF7-209ENST00000463244 TRBV6-1A0A0K0K1D8 114 aa13.25□□□□□ -0.29
CPSF7-209ENST00000463244 RPL7L1Q6DKI1 246 aaKnown RBP13.25□□□□□ -0.29
CPSF7-209ENST00000463244 NTM-AS1Q6ZSK4 140 aa13.25□□□□□ -0.29
CPSF7-209ENST00000463244 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.25□□□□□ -0.29
CPSF7-209ENST00000463244 ALG5Q9Y673 324 aa13.25□□□□□ -0.29
CPSF7-209ENST00000463244 CIRBPQ14011 172 aaKnown RBP13.24□□□□□ -0.29
CPSF7-209ENST00000463244 CLPSL2Q6UWE3 100 aa13.24□□□□□ -0.29
CPSF7-209ENST00000463244 OR10AG1Q8NH19 301 aa13.24□□□□□ -0.29
CPSF7-209ENST00000463244 RBX1P62877 108 aa13.23□□□□□ -0.29
CPSF7-209ENST00000463244 LINC00269Q8N2A0 174 aa13.23□□□□□ -0.29
CPSF7-209ENST00000463244 CLRN3Q8NCR9 226 aa13.23□□□□□ -0.29
CPSF7-209ENST00000463244 VAX2Q9UIW0 290 aa13.23□□□□□ -0.29
CPSF7-209ENST00000463244 CNBPP62633 177 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms