RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 C1orf43Q9BWL3 253 aa12.14□□□□□ -0.47
SMC4-204ENST00000462787 C20orf203Q8NBC4 194 aa12.14□□□□□ -0.47
SMC4-204ENST00000462787 SND1-IT1Q9HBX3 110 aa12.14□□□□□ -0.47
SMC4-204ENST00000462787 TEX49A0A1B0GTD5 131 aa12.14□□□□□ -0.47
SMC4-204ENST00000462787 FANCD2OSQ96PS1 177 aa12.14□□□□□ -0.47
SMC4-204ENST00000462787 NCOR1O75376 2440 aa12.14□□□□□ -0.47
SMC4-204ENST00000462787 NCKAP5O14513 1909 aa12.14□□□□□ -0.47
SMC4-204ENST00000462787 IGHV3-30-3P0DP02 117 aa12.13□□□□□ -0.47
SMC4-204ENST00000462787 MIAQ16674 131 aa12.13□□□□□ -0.47
SMC4-204ENST00000462787 IGFL2Q6UWQ7 119 aa12.13□□□□□ -0.47
SMC4-204ENST00000462787 CENPVL3A0A0U1RRI6 287 aa12.13□□□□□ -0.47
SMC4-204ENST00000462787 CRYGBP07316 175 aa12.13□□□□□ -0.47
SMC4-204ENST00000462787 RNF185Q96GF1 192 aa12.13□□□□□ -0.47
SMC4-204ENST00000462787 RPL35AP18077 110 aaKnown RBP12.13□□□□□ -0.47
SMC4-204ENST00000462787 IGLV2-11P01706 119 aa12.12□□□□□ -0.47
SMC4-204ENST00000462787 GATA3P23771 443 aa12.12□□□□□ -0.47
SMC4-204ENST00000462787 URB1-AS1Q96HZ7 61 aa12.12□□□□□ -0.47
SMC4-204ENST00000462787 MDFICQ9P1T7 246 aa12.12□□□□□ -0.47
SMC4-204ENST00000462787 CREBBPQ92793 2442 aa12.12□□□□□ -0.47
SMC4-204ENST00000462787 MSMPQ1L6U9 139 aa12.12□□□□□ -0.47
SMC4-204ENST00000462787 A0A0J9YXY3 114 aa12.12□□□□□ -0.47
SMC4-204ENST00000462787 Q8N9W7 124 aa12.12□□□□□ -0.47
SMC4-204ENST00000462787 GTF3C1Q12789 2109 aa12.11□□□□□ -0.47
SMC4-204ENST00000462787 hADV29S1A0JD25 119 aa12.11□□□□□ -0.47
SMC4-204ENST00000462787 XGP55808 180 aa12.11□□□□□ -0.47
SMC4-204ENST00000462787 DAZAP2Q15038 168 aaPredicted RBP12.11□□□□□ -0.47
SMC4-204ENST00000462787 C5orf47Q569G3 176 aa12.11□□□□□ -0.47
SMC4-204ENST00000462787 EP300Q09472 2414 aaPredicted RBP12.11□□□□□ -0.47
SMC4-204ENST00000462787 JMJD7-PLA2G4BH0Y9G9 81 aa12.11□□□□□ -0.47
SMC4-204ENST00000462787 MSMBP08118 114 aa12.11□□□□□ -0.47
SMC4-204ENST00000462787 PSMB8P28062 276 aa12.11□□□□□ -0.47
SMC4-204ENST00000462787 C3orf22Q8N5N4 141 aa12.11□□□□□ -0.47
SMC4-204ENST00000462787 VSIG2Q96IQ7 327 aa12.1□□□□□ -0.47
SMC4-204ENST00000462787 F8WEM9 126 aa12.1□□□□□ -0.47
SMC4-204ENST00000462787 DAND5Q8N907 189 aa12.1□□□□□ -0.47
SMC4-204ENST00000462787 TRBV30A0A0K0K1B3 111 aa12.1□□□□□ -0.47
SMC4-204ENST00000462787 NDUFC2O95298 119 aa12.1□□□□□ -0.47
SMC4-204ENST00000462787 HOXD3P31249 432 aaPredicted RBP12.1□□□□□ -0.47
SMC4-204ENST00000462787 FREM1Q5H8C1 2179 aa12.1□□□□□ -0.47
SMC4-204ENST00000462787 IGHV3-33P01772 117 aa12.09□□□□□ -0.47
SMC4-204ENST00000462787 RNF152Q8N8N0 203 aa12.09□□□□□ -0.47
SMC4-204ENST00000462787 DEFB130BP0DP73 79 aa12.09□□□□□ -0.47
SMC4-204ENST00000462787 DEFB130AP0DP74 79 aa12.09□□□□□ -0.47
SMC4-204ENST00000462787 C11orf44Q8N8P7 122 aa12.09□□□□□ -0.47
SMC4-204ENST00000462787 U3KQE9 123 aa12.09□□□□□ -0.47
SMC4-204ENST00000462787 GPR179Q6PRD1 2367 aa12.08□□□□□ -0.48
SMC4-204ENST00000462787 ARFGEF3Q5TH69 2177 aa12.08□□□□□ -0.48
SMC4-204ENST00000462787 TRBV7-3A0A075B6L6 115 aa12.08□□□□□ -0.48
SMC4-204ENST00000462787 COX7A2LO14548 114 aa12.08□□□□□ -0.48
SMC4-204ENST00000462787 NFE4Q86UQ8 179 aa12.08□□□□□ -0.48
SMC4-204ENST00000462787 IMUPQ9GZP8 106 aa12.08□□□□□ -0.48
SMC4-204ENST00000462787 ELANEP08246 267 aa12.08□□□□□ -0.48
SMC4-204ENST00000462787 IGHG2P01859 326 aa12.07□□□□□ -0.48
SMC4-204ENST00000462787 LINC01356Q8N9X3 169 aa12.07□□□□□ -0.48
SMC4-204ENST00000462787 INSL3P51460 131 aa12.07□□□□□ -0.48
SMC4-204ENST00000462787 CFHR3Q02985 330 aa12.07□□□□□ -0.48
SMC4-204ENST00000462787 SPTAN1Q13813 2472 aaKnown RBP12.06□□□□□ -0.48
SMC4-204ENST00000462787 CACNA1GO43497 2377 aa12.06□□□□□ -0.48
SMC4-204ENST00000462787 COX7B2Q8TF08 81 aa12.06□□□□□ -0.48
SMC4-204ENST00000462787 PRR30Q53SZ7 412 aaPredicted RBP12.05□□□□□ -0.48
SMC4-204ENST00000462787 Q6Q795 121 aa12.05□□□□□ -0.48
SMC4-204ENST00000462787 H3BQ85 93 aa12.05□□□□□ -0.48
SMC4-204ENST00000462787 TMEM61Q8N0U2 210 aa12.05□□□□□ -0.48
SMC4-204ENST00000462787 DPH3Q96FX2 82 aa12.05□□□□□ -0.48
SMC4-204ENST00000462787 OPRPNQ99935 248 aaPredicted RBP12.05□□□□□ -0.48
SMC4-204ENST00000462787 TMEM223A0PJW6 202 aa12.05□□□□□ -0.48
SMC4-204ENST00000462787 DAZ2Q13117 558 aaKnown RBP12.05□□□□□ -0.48
SMC4-204ENST00000462787 DAZ4Q86SG3 579 aaKnown RBP12.05□□□□□ -0.48
SMC4-204ENST00000462787 DAZ3Q9NR90 486 aaKnown RBP12.05□□□□□ -0.48
SMC4-204ENST00000462787 IGHV3-30P01768 117 aa12.05□□□□□ -0.48
SMC4-204ENST00000462787 IGHV3-30-5P0DP03 117 aa12.05□□□□□ -0.48
SMC4-204ENST00000462787 K7EMT4 169 aa12.04□□□□□ -0.48
SMC4-204ENST00000462787 LECT2O14960 151 aa12.04□□□□□ -0.48
SMC4-204ENST00000462787 TRIAP1O43715 76 aa12.04□□□□□ -0.48
SMC4-204ENST00000462787 AJUBAQ96IF1 538 aa12.04□□□□□ -0.48
SMC4-204ENST00000462787 SPRY4Q9C004 299 aa12.04□□□□□ -0.48
SMC4-204ENST00000462787 TRAV4A0A0B4J268 109 aa12.04□□□□□ -0.48
SMC4-204ENST00000462787 PLA2G2CQ5R387 149 aa12.04□□□□□ -0.48
SMC4-204ENST00000462787 DOPEY2Q9Y3R5 2298 aa12.04□□□□□ -0.48
SMC4-204ENST00000462787 TNCP24821 2201 aa12.03□□□□□ -0.48
SMC4-204ENST00000462787 MED12LQ86YW9 2145 aa12.03□□□□□ -0.48
SMC4-204ENST00000462787 MRPS12O15235 138 aaKnown RBP12.03□□□□□ -0.48
SMC4-204ENST00000462787 SPTBN2O15020 2390 aa12.03□□□□□ -0.48
SMC4-204ENST00000462787 CCDC179H3BU77 68 aa12.03□□□□□ -0.48
SMC4-204ENST00000462787 SEM1Q6ZVN7 128 aa12.03□□□□□ -0.48
SMC4-204ENST00000462787 TRAV25A0A0B4J276 109 aa12.03□□□□□ -0.48
SMC4-204ENST00000462787 ZNF22P17026 224 aaPredicted RBP12.02□□□□□ -0.48
SMC4-204ENST00000462787 NUP210LQ5VU65 1888 aa12.02□□□□□ -0.48
SMC4-204ENST00000462787 NDUFA7O95182 113 aa12.02□□□□□ -0.48
SMC4-204ENST00000462787 C5orf56Q8N8D9 126 aa12.02□□□□□ -0.48
SMC4-204ENST00000462787 ACACAQ13085 2346 aa12.02□□□□□ -0.49
SMC4-204ENST00000462787 NBL1P41271 181 aa12.02□□□□□ -0.49
SMC4-204ENST00000462787 HHLA3Q9XRX5 114 aa12.02□□□□□ -0.49
SMC4-204ENST00000462787 ZNF561-AS1K7EIQ3 104 aa12.02□□□□□ -0.49
SMC4-204ENST00000462787 NSUN5P1Q3KNT7 163 aa12.02□□□□□ -0.49
SMC4-204ENST00000462787 NRACQ8N912 160 aa12.02□□□□□ -0.49
SMC4-204ENST00000462787 HIST2H2BCQ6DN03 193 aa12.01□□□□□ -0.49
SMC4-204ENST00000462787 HIST2H2BDQ6DRA6 164 aa12.01□□□□□ -0.49
SMC4-204ENST00000462787 K7EQD1 137 aa12□□□□□ -0.49
SMC4-204ENST00000462787 C5orf38Q86SI9 138 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms