RNA–Protein interactions for RNA: ENST00000462597.1

PDLIM4-204, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 767 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-204ENST00000462597 V9GYV3 84 aa12.91□□□□□ -0.34
PDLIM4-204ENST00000462597 KIAA1109Q2LD37 5005 aa12.91□□□□□ -0.34
PDLIM4-204ENST00000462597 TRAV26-1A0A087WT03 109 aa12.9□□□□□ -0.34
PDLIM4-204ENST00000462597 A0A0J9YY99 117 aa12.9□□□□□ -0.34
PDLIM4-204ENST00000462597 A0A1B0GVY2 172 aa12.9□□□□□ -0.34
PDLIM4-204ENST00000462597 A0A1W2PPQ1 181 aa12.9□□□□□ -0.34
PDLIM4-204ENST00000462597 A8MWV9 139 aa12.9□□□□□ -0.34
PDLIM4-204ENST00000462597 NXPH4O95158 308 aa12.9□□□□□ -0.34
PDLIM4-204ENST00000462597 FHL2Q14192 279 aa12.9□□□□□ -0.34
PDLIM4-204ENST00000462597 LYZL1Q6UWQ5 148 aa12.9□□□□□ -0.34
PDLIM4-204ENST00000462597 GTSF1Q8WW33 167 aa12.9□□□□□ -0.34
PDLIM4-204ENST00000462597 IGHV3-73A0A0B4J1V6 119 aa12.89□□□□□ -0.35
PDLIM4-204ENST00000462597 PRSS29PA6NIE9 313 aa12.89□□□□□ -0.35
PDLIM4-204ENST00000462597 CTRLP40313 264 aa12.89□□□□□ -0.35
PDLIM4-204ENST00000462597 PNRC1Q12796 327 aaPredicted RBP12.89□□□□□ -0.35
PDLIM4-204ENST00000462597 RNF212Q495C1 297 aa12.89□□□□□ -0.35
PDLIM4-204ENST00000462597 Q6ZR54 194 aa12.89□□□□□ -0.35
PDLIM4-204ENST00000462597 PKD1P98161 4303 aa12.89□□□□□ -0.35
PDLIM4-204ENST00000462597 F2Z2F3 143 aa12.88□□□□□ -0.35
PDLIM4-204ENST00000462597 CACNG7P62955 275 aa12.88□□□□□ -0.35
PDLIM4-204ENST00000462597 FAM74A4Q5TZK3 123 aa12.88□□□□□ -0.35
PDLIM4-204ENST00000462597 C15orf53Q8NAA6 179 aa12.88□□□□□ -0.35
PDLIM4-204ENST00000462597 TSKUQ8WUA8 353 aa12.88□□□□□ -0.35
PDLIM4-204ENST00000462597 SAMD10Q9BYL1 202 aa12.88□□□□□ -0.35
PDLIM4-204ENST00000462597 A0A087WWL8 130 aa12.87□□□□□ -0.35
PDLIM4-204ENST00000462597 NUDT3O95989 172 aa12.87□□□□□ -0.35
PDLIM4-204ENST00000462597 PGLYRP4Q96LB8 373 aa12.87□□□□□ -0.35
PDLIM4-204ENST00000462597 SEC11CQ9BY50 192 aa12.87□□□□□ -0.35
PDLIM4-204ENST00000462597 PRO0255Q9UI72 69 aa12.87□□□□□ -0.35
PDLIM4-204ENST00000462597 HHLA3Q9XRX5 114 aa12.87□□□□□ -0.35
PDLIM4-204ENST00000462597 PAX4O43316 350 aa12.86□□□□□ -0.35
PDLIM4-204ENST00000462597 CIDEAO60543 219 aa12.86□□□□□ -0.35
PDLIM4-204ENST00000462597 CRYBA4P53673 196 aa12.86□□□□□ -0.35
PDLIM4-204ENST00000462597 MSRB1Q9NZV6 116 aa12.86□□□□□ -0.35
PDLIM4-204ENST00000462597 HIGD1CA8MV81 97 aa12.85□□□□□ -0.35
PDLIM4-204ENST00000462597 RHODO00212 210 aa12.85□□□□□ -0.35
PDLIM4-204ENST00000462597 GATA1P15976 413 aaPredicted RBP12.85□□□□□ -0.35
PDLIM4-204ENST00000462597 SLAQ13239 276 aa12.85□□□□□ -0.35
PDLIM4-204ENST00000462597 UFSP1Q6NVU6 142 aa12.85□□□□□ -0.35
PDLIM4-204ENST00000462597 ZFP2Q6ZN57 461 aa12.85□□□□□ -0.35
PDLIM4-204ENST00000462597 VSIG2Q96IQ7 327 aa12.85□□□□□ -0.35
PDLIM4-204ENST00000462597 AP1S3Q96PC3 154 aa12.85□□□□□ -0.35
PDLIM4-204ENST00000462597 GFRA4Q9GZZ7 299 aa12.85□□□□□ -0.35
PDLIM4-204ENST00000462597 CRYGDP07320 174 aa12.84□□□□□ -0.35
PDLIM4-204ENST00000462597 NTF3P20783 257 aa12.84□□□□□ -0.35
PDLIM4-204ENST00000462597 KRTAP17-1Q9BYP8 105 aa12.84□□□□□ -0.35
PDLIM4-204ENST00000462597 FAM231BA6NCW3 169 aa12.83□□□□□ -0.36
PDLIM4-204ENST00000462597 FOXA3P55318 350 aaPredicted RBP12.83□□□□□ -0.36
PDLIM4-204ENST00000462597 TWIST1Q15672 202 aa12.83□□□□□ -0.36
PDLIM4-204ENST00000462597 C14orf178Q8N769 122 aaPredicted RBP12.83□□□□□ -0.36
PDLIM4-204ENST00000462597 BORCS7Q96B45 105 aa12.83□□□□□ -0.36
PDLIM4-204ENST00000462597 CNFNQ9BYD5 112 aa12.83□□□□□ -0.36
PDLIM4-204ENST00000462597 H3BNG1 76 aa12.82□□□□□ -0.36
PDLIM4-204ENST00000462597 PPP1R2P9O14990 202 aa12.82□□□□□ -0.36
PDLIM4-204ENST00000462597 MT-ND4LP03901 98 aa12.82□□□□□ -0.36
PDLIM4-204ENST00000462597 SMIM17P0DL12 118 aa12.82□□□□□ -0.36
PDLIM4-204ENST00000462597 WDR73Q6P4I2 378 aa12.82□□□□□ -0.36
PDLIM4-204ENST00000462597 Q6ZSN1 163 aa12.82□□□□□ -0.36
PDLIM4-204ENST00000462597 SLC25A29Q8N8R3 303 aa12.82□□□□□ -0.36
PDLIM4-204ENST00000462597 TRGC1P0CF51 173 aa12.81□□□□□ -0.36
PDLIM4-204ENST00000462597 GYPEP15421 78 aa12.81□□□□□ -0.36
PDLIM4-204ENST00000462597 RHOHQ15669 191 aa12.81□□□□□ -0.36
PDLIM4-204ENST00000462597 ZNF56Q15929 161 aa12.81□□□□□ -0.36
PDLIM4-204ENST00000462597 C10orf91Q5T1B1 145 aa12.81□□□□□ -0.36
PDLIM4-204ENST00000462597 NUP35Q8NFH5 326 aa12.81□□□□□ -0.36
PDLIM4-204ENST00000462597 NAT8BQ9UHF3 227 aa12.81□□□□□ -0.36
PDLIM4-204ENST00000462597 ICOSQ9Y6W8 199 aa12.81□□□□□ -0.36
PDLIM4-204ENST00000462597 DYNC1H1Q14204 4646 aaKnown RBP12.8□□□□□ -0.36
PDLIM4-204ENST00000462597 LOC100131303A0A0U1RQF7 123 aa12.8□□□□□ -0.36
PDLIM4-204ENST00000462597 A0A1B0GUT8 65 aa12.8□□□□□ -0.36
PDLIM4-204ENST00000462597 TRBV6-4A0A1B0GX49 114 aa12.8□□□□□ -0.36
PDLIM4-204ENST00000462597 SMIM27A0A1W2PRY6 76 aa12.8□□□□□ -0.36
PDLIM4-204ENST00000462597 C1orf134Q5TEV5 83 aa12.8□□□□□ -0.36
PDLIM4-204ENST00000462597 ZNRF2Q8NHG8 242 aa12.8□□□□□ -0.36
PDLIM4-204ENST00000462597 ANAPC16Q96DE5 110 aa12.8□□□□□ -0.36
PDLIM4-204ENST00000462597 CARHSP1Q9Y2V2 147 aaKnown RBP12.8□□□□□ -0.36
PDLIM4-204ENST00000462597 PCLOQ9Y6V0 5065 aa12.79□□□□□ -0.36
PDLIM4-204ENST00000462597 DNAH11Q96DT5 4516 aa12.79□□□□□ -0.36
PDLIM4-204ENST00000462597 A0A096LPF7 62 aa12.79□□□□□ -0.36
PDLIM4-204ENST00000462597 K7EQD1 137 aa12.79□□□□□ -0.36
PDLIM4-204ENST00000462597 MGPP08493 103 aa12.79□□□□□ -0.36
PDLIM4-204ENST00000462597 EVI2AP22794 236 aa12.79□□□□□ -0.36
PDLIM4-204ENST00000462597 FAM3BP58499 235 aaPredicted RBP12.79□□□□□ -0.36
PDLIM4-204ENST00000462597 PRADC1Q9BSG0 188 aa12.79□□□□□ -0.36
PDLIM4-204ENST00000462597 LINC00588Q9Y4M8 146 aa12.79□□□□□ -0.36
PDLIM4-204ENST00000462597 KIF25-AS1Q9Y6Z4 181 aa12.79□□□□□ -0.36
PDLIM4-204ENST00000462597 F5H697 171 aa12.78□□□□□ -0.36
PDLIM4-204ENST00000462597 SLC7A5P1Q8MH63 180 aa12.78□□□□□ -0.36
PDLIM4-204ENST00000462597 DPH3P1Q9H4G8 78 aa12.78□□□□□ -0.36
PDLIM4-204ENST00000462597 CCL18P55774 89 aa12.77□□□□□ -0.37
PDLIM4-204ENST00000462597 RAB4BP61018 213 aa12.77□□□□□ -0.37
PDLIM4-204ENST00000462597 MRPL23Q16540 153 aaKnown RBP12.77□□□□□ -0.37
PDLIM4-204ENST00000462597 NBDYA0A0U1RRE5 68 aa12.76□□□□□ -0.37
PDLIM4-204ENST00000462597 SRIP30626 198 aa12.76□□□□□ -0.37
PDLIM4-204ENST00000462597 LINC00315P59091 139 aa12.76□□□□□ -0.37
PDLIM4-204ENST00000462597 SMIM15Q7Z3B0 74 aa12.76□□□□□ -0.37
PDLIM4-204ENST00000462597 APOC3P02656 99 aa12.75□□□□□ -0.37
PDLIM4-204ENST00000462597 RIGQ13278 110 aa12.75□□□□□ -0.37
PDLIM4-204ENST00000462597 NDUFA5Q16718 116 aa12.75□□□□□ -0.37
PDLIM4-204ENST00000462597 MRPL54Q6P161 138 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms