RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 RNASE3P12724 160 aaKnown RBP6.17□□□□□ -1.42
DDX39B-216ENST00000462421 TIRAPP58753 221 aa6.17□□□□□ -1.42
DDX39B-216ENST00000462421 LINC00315P59091 139 aa6.17□□□□□ -1.42
DDX39B-216ENST00000462421 PKIAP61925 76 aa6.17□□□□□ -1.42
DDX39B-216ENST00000462421 GAGE1Q13065 139 aa6.17□□□□□ -1.42
DDX39B-216ENST00000462421 GAGE4Q13068 117 aa6.17□□□□□ -1.42
DDX39B-216ENST00000462421 GAGE5Q13069 117 aa6.17□□□□□ -1.42
DDX39B-216ENST00000462421 GAGE13Q4V321 117 aa6.17□□□□□ -1.42
DDX39B-216ENST00000462421 CENPWQ5EE01 88 aa6.17□□□□□ -1.42
DDX39B-216ENST00000462421 SMIM15Q7Z3B0 74 aa6.17□□□□□ -1.42
DDX39B-216ENST00000462421 BORCS7Q96B45 105 aa6.17□□□□□ -1.42
DDX39B-216ENST00000462421 RMI2Q96E14 147 aa6.17□□□□□ -1.42
DDX39B-216ENST00000462421 AP1S3Q96PC3 154 aa6.17□□□□□ -1.42
DDX39B-216ENST00000462421 GTSF1LQ9H1H1 148 aa6.17□□□□□ -1.42
DDX39B-216ENST00000462421 MSRB1Q9NZV6 116 aa6.17□□□□□ -1.42
DDX39B-216ENST00000462421 EPPK1P58107 5090 aaKnown RBP6.17□□□□□ -1.42
DDX39B-216ENST00000462421 HYDINQ4G0P3 5121 aa6.16□□□□□ -1.42
DDX39B-216ENST00000462421 H7C1H1 209 aa6.16□□□□□ -1.42
DDX39B-216ENST00000462421 CXCL1P09341 107 aa6.16□□□□□ -1.42
DDX39B-216ENST00000462421 BCL2P10415 239 aa6.16□□□□□ -1.42
DDX39B-216ENST00000462421 CEBPGP53567 150 aa6.16□□□□□ -1.42
DDX39B-216ENST00000462421 DNLZQ5SXM8 178 aa6.16□□□□□ -1.42
DDX39B-216ENST00000462421 LELP1Q5T871 98 aa6.16□□□□□ -1.42
DDX39B-216ENST00000462421 Q6ZNX1 250 aa6.16□□□□□ -1.42
DDX39B-216ENST00000462421 COX8CQ7Z4L0 72 aa6.16□□□□□ -1.42
DDX39B-216ENST00000462421 TM2D2Q9BX73 214 aa6.16□□□□□ -1.42
DDX39B-216ENST00000462421 C11orf21Q9P2W6 132 aa6.16□□□□□ -1.42
DDX39B-216ENST00000462421 A0A087WWL8 130 aa6.15□□□□□ -1.42
DDX39B-216ENST00000462421 A0A087WX48 190 aa6.15□□□□□ -1.42
DDX39B-216ENST00000462421 TRBV10-1A0A0K0K1A3 114 aa6.15□□□□□ -1.42
DDX39B-216ENST00000462421 LOC100131303A0A0U1RQF7 123 aa6.15□□□□□ -1.42
DDX39B-216ENST00000462421 SSTP61278 116 aa6.15□□□□□ -1.42
DDX39B-216ENST00000462421 CACNG7P62955 275 aa6.15□□□□□ -1.42
DDX39B-216ENST00000462421 CCL20P78556 96 aa6.15□□□□□ -1.42
DDX39B-216ENST00000462421 ELOBQ15370 118 aa6.15□□□□□ -1.42
DDX39B-216ENST00000462421 TMEM97Q5BJF2 176 aa6.15□□□□□ -1.42
DDX39B-216ENST00000462421 FER1L6-AS1Q8NA97 138 aa6.15□□□□□ -1.42
DDX39B-216ENST00000462421 OR2D3Q8NGH3 330 aa6.15□□□□□ -1.42
DDX39B-216ENST00000462421 C11orf52Q96A22 123 aa6.15□□□□□ -1.42
DDX39B-216ENST00000462421 SFRP2Q96HF1 295 aa6.15□□□□□ -1.42
DDX39B-216ENST00000462421 KRTAP4-12Q9BQ66 201 aa6.15□□□□□ -1.42
DDX39B-216ENST00000462421 EIF5A2Q9GZV4 153 aaKnown RBP6.15□□□□□ -1.42
DDX39B-216ENST00000462421 F2Z2F3 143 aa6.14□□□□□ -1.43
DDX39B-216ENST00000462421 IGHV3-30P01768 117 aa6.14□□□□□ -1.43
DDX39B-216ENST00000462421 IGHV3-33P01772 117 aa6.14□□□□□ -1.43
DDX39B-216ENST00000462421 MGPP08493 103 aa6.14□□□□□ -1.43
DDX39B-216ENST00000462421 TRGC1P0CF51 173 aa6.14□□□□□ -1.43
DDX39B-216ENST00000462421 IGHV3-30-3P0DP02 117 aa6.14□□□□□ -1.43
DDX39B-216ENST00000462421 IGHV3-30-5P0DP03 117 aa6.14□□□□□ -1.43
DDX39B-216ENST00000462421 RAB4BP61018 213 aa6.14□□□□□ -1.43
DDX39B-216ENST00000462421 TNP2Q05952 138 aa6.14□□□□□ -1.43
DDX39B-216ENST00000462421 WFDC10BQ8IUB3 73 aa6.14□□□□□ -1.43
DDX39B-216ENST00000462421 COX11Q9Y6N1 276 aa6.14□□□□□ -1.43
DDX39B-216ENST00000462421 VPS13DQ5THJ4 4388 aa6.14□□□□□ -1.43
DDX39B-216ENST00000462421 TMEM262E9PQX1 116 aa6.13□□□□□ -1.43
DDX39B-216ENST00000462421 CRPP02741 224 aa6.13□□□□□ -1.43
DDX39B-216ENST00000462421 DNAH10OSP0CZ25 163 aa6.13□□□□□ -1.43
DDX39B-216ENST00000462421 LINC01556Q5JQF7 62 aa6.13□□□□□ -1.43
DDX39B-216ENST00000462421 ALKAL2Q6UX46 152 aa6.13□□□□□ -1.43
DDX39B-216ENST00000462421 SPATA12Q7Z6I5 190 aa6.13□□□□□ -1.43
DDX39B-216ENST00000462421 Q9HAA7 133 aa6.13□□□□□ -1.43
DDX39B-216ENST00000462421 TNFRSF18Q9Y5U5 241 aa6.13□□□□□ -1.43
DDX39B-216ENST00000462421 TRAV8-3A0A0A6YYJ7 113 aa6.12□□□□□ -1.43
DDX39B-216ENST00000462421 RBFOX3A6NFN3 312 aa6.12□□□□□ -1.43
DDX39B-216ENST00000462421 OR5AL1P0C617 328 aa6.12□□□□□ -1.43
DDX39B-216ENST00000462421 CRIP1P50238 77 aa6.12□□□□□ -1.43
DDX39B-216ENST00000462421 RPL19P84098 196 aaKnown RBP6.12□□□□□ -1.43
DDX39B-216ENST00000462421 CDPF1Q6NVV7 123 aa6.12□□□□□ -1.43
DDX39B-216ENST00000462421 C9orf62Q8N4C0 152 aa6.12□□□□□ -1.43
DDX39B-216ENST00000462421 PGPEP1Q9NXJ5 209 aa6.12□□□□□ -1.43
DDX39B-216ENST00000462421 TRBV7-3A0A075B6L6 115 aa6.11□□□□□ -1.43
DDX39B-216ENST00000462421 A0A1B0GVY2 172 aa6.11□□□□□ -1.43
DDX39B-216ENST00000462421 RAB19A4D1S5 217 aa6.11□□□□□ -1.43
DDX39B-216ENST00000462421 TMEM250H0YL14 139 aa6.11□□□□□ -1.43
DDX39B-216ENST00000462421 SMCPP49901 116 aaPredicted RBP6.11□□□□□ -1.43
DDX39B-216ENST00000462421 LAGE3Q14657 143 aa6.11□□□□□ -1.43
DDX39B-216ENST00000462421 C14orf178Q8N769 122 aaPredicted RBP6.11□□□□□ -1.43
DDX39B-216ENST00000462421 OR10AG1Q8NH19 301 aa6.11□□□□□ -1.43
DDX39B-216ENST00000462421 DERL1Q9BUN8 251 aa6.11□□□□□ -1.43
DDX39B-216ENST00000462421 SCRT2Q9NQ03 307 aa6.11□□□□□ -1.43
DDX39B-216ENST00000462421 KMT2AQ03164 3969 aa6.1□□□□□ -1.43
DDX39B-216ENST00000462421 MUC21A0A0G2JKD1 596 aa6.1□□□□□ -1.43
DDX39B-216ENST00000462421 MUC21A0A140T8X8 626 aa6.1□□□□□ -1.43
DDX39B-216ENST00000462421 UBE2L6O14933 153 aa6.1□□□□□ -1.43
DDX39B-216ENST00000462421 SNAI2O43623 268 aa6.1□□□□□ -1.43
DDX39B-216ENST00000462421 Q0VG73 95 aa6.1□□□□□ -1.43
DDX39B-216ENST00000462421 TWIST1Q15672 202 aa6.1□□□□□ -1.43
DDX39B-216ENST00000462421 DAZ4Q86SG3 579 aaKnown RBP6.1□□□□□ -1.43
DDX39B-216ENST00000462421 C15orf54Q8N8G6 183 aa6.1□□□□□ -1.43
DDX39B-216ENST00000462421 CHCHD5Q9BSY4 110 aa6.1□□□□□ -1.43
DDX39B-216ENST00000462421 CHCHD7Q9BUK0 85 aa6.1□□□□□ -1.43
DDX39B-216ENST00000462421 MLST8Q9BVC4 326 aa6.1□□□□□ -1.43
DDX39B-216ENST00000462421 SAMD10Q9BYL1 202 aa6.1□□□□□ -1.43
DDX39B-216ENST00000462421 RPP21Q9H633 154 aaKnown RBP6.1□□□□□ -1.43
DDX39B-216ENST00000462421 JPT2Q9H910 190 aa6.1□□□□□ -1.43
DDX39B-216ENST00000462421 DAZ3Q9NR90 486 aaKnown RBP6.1□□□□□ -1.43
DDX39B-216ENST00000462421 MUC4Q99102 2169 aa6.1□□□□□ -1.43
DDX39B-216ENST00000462421 DNAH6Q9C0G6 4158 aa6.1□□□□□ -1.43
DDX39B-216ENST00000462421 TRBV25-1A0A075B6N4 114 aa6.09□□□□□ -1.43
DDX39B-216ENST00000462421 IBA57-AS1B1ANH7 110 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms