RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-222	ENST00000462212	RHOD	O00212	210 aa		5.68	□□□□□ -1.5
ITSN1-222	ENST00000462212	CRYGD	P07320	174 aa		5.68	□□□□□ -1.5
ITSN1-222	ENST00000462212	DNAH10OS	P0CZ25	163 aa		5.68	□□□□□ -1.5
ITSN1-222	ENST00000462212	NKX2-5	P52952	324 aa	Predicted RBP	5.68	□□□□□ -1.5
ITSN1-222	ENST00000462212	PRR27	Q6MZM9	219 aa		5.68	□□□□□ -1.5
ITSN1-222	ENST00000462212	ALKAL2	Q6UX46	152 aa		5.68	□□□□□ -1.5
ITSN1-222	ENST00000462212		Q6ZRN7	208 aa	Predicted RBP	5.68	□□□□□ -1.5
ITSN1-222	ENST00000462212	WFDC10B	Q8IUB3	73 aa		5.68	□□□□□ -1.5
ITSN1-222	ENST00000462212	ZFP82	Q8N141	532 aa		5.68	□□□□□ -1.5
ITSN1-222	ENST00000462212	DYNC1H1	Q14204	4646 aa	Known RBP	5.67	□□□□□ -1.5
ITSN1-222	ENST00000462212	RAB19	A4D1S5	217 aa		5.67	□□□□□ -1.5
ITSN1-222	ENST00000462212	C19orf71	A6NCJ1	209 aa		5.67	□□□□□ -1.5
ITSN1-222	ENST00000462212		M0R381	172 aa		5.67	□□□□□ -1.5
ITSN1-222	ENST00000462212	OR5AL1	P0C617	328 aa		5.67	□□□□□ -1.5
ITSN1-222	ENST00000462212	LINC00315	P59091	139 aa		5.67	□□□□□ -1.5
ITSN1-222	ENST00000462212	BLOC1S1	P78537	153 aa		5.67	□□□□□ -1.5
ITSN1-222	ENST00000462212	LCE2C	Q5TA81	110 aa		5.67	□□□□□ -1.5
ITSN1-222	ENST00000462212	C14orf178	Q8N769	122 aa	Predicted RBP	5.67	□□□□□ -1.5
ITSN1-222	ENST00000462212	OR10AG1	Q8NH19	301 aa		5.67	□□□□□ -1.5
ITSN1-222	ENST00000462212	MED9	Q9NWA0	146 aa		5.67	□□□□□ -1.5
ITSN1-222	ENST00000462212		Q9UF83	564 aa		5.67	□□□□□ -1.5
ITSN1-222	ENST00000462212	LY96	Q9Y6Y9	160 aa		5.67	□□□□□ -1.5
ITSN1-222	ENST00000462212		A0A087WWL8	130 aa		5.66	□□□□□ -1.5
ITSN1-222	ENST00000462212	IGLC6	P0CF74	106 aa		5.66	□□□□□ -1.5
ITSN1-222	ENST00000462212	GNG4	P50150	75 aa		5.66	□□□□□ -1.5
ITSN1-222	ENST00000462212	LELP1	Q5T871	98 aa		5.66	□□□□□ -1.5
ITSN1-222	ENST00000462212	FAM74A4	Q5TZK3	123 aa		5.66	□□□□□ -1.5
ITSN1-222	ENST00000462212	SLC7A5P1	Q8MH63	180 aa		5.66	□□□□□ -1.5
ITSN1-222	ENST00000462212	ATP6V0E2	Q8NHE4	81 aa		5.66	□□□□□ -1.5
ITSN1-222	ENST00000462212	GTSF1L	Q9H1H1	148 aa		5.66	□□□□□ -1.5
ITSN1-222	ENST00000462212	KIAA1109	Q2LD37	5005 aa		5.66	□□□□□ -1.5
ITSN1-222	ENST00000462212	HERC2	O95714	4834 aa		5.65	□□□□□ -1.5
ITSN1-222	ENST00000462212	TRAV9-2	A0A087WT02	112 aa		5.65	□□□□□ -1.5
ITSN1-222	ENST00000462212	IGHV3-38	A0A0C4DH36	116 aa		5.65	□□□□□ -1.5
ITSN1-222	ENST00000462212	TRBV10-1	A0A0K0K1A3	114 aa		5.65	□□□□□ -1.5
ITSN1-222	ENST00000462212	GAGE12J	A6NER3	117 aa		5.65	□□□□□ -1.5
ITSN1-222	ENST00000462212	RBFOX3	A6NFN3	312 aa		5.65	□□□□□ -1.5
ITSN1-222	ENST00000462212	TMEM250	H0YL14	139 aa		5.65	□□□□□ -1.5
ITSN1-222	ENST00000462212	NDUFS6	O75380	124 aa	Known RBP	5.65	□□□□□ -1.5
ITSN1-222	ENST00000462212	EVI2A	P22794	236 aa		5.65	□□□□□ -1.5
ITSN1-222	ENST00000462212	RPS20	P60866	119 aa	Known RBP	5.65	□□□□□ -1.5
ITSN1-222	ENST00000462212	CTAG1A	P78358	180 aa		5.65	□□□□□ -1.5
ITSN1-222	ENST00000462212	GAGE1	Q13065	139 aa		5.65	□□□□□ -1.5
ITSN1-222	ENST00000462212	GAGE4	Q13068	117 aa		5.65	□□□□□ -1.5
ITSN1-222	ENST00000462212	GAGE5	Q13069	117 aa		5.65	□□□□□ -1.5
ITSN1-222	ENST00000462212	GAGE13	Q4V321	117 aa		5.65	□□□□□ -1.5
ITSN1-222	ENST00000462212	LINC01556	Q5JQF7	62 aa		5.65	□□□□□ -1.5
ITSN1-222	ENST00000462212	BIN3	Q9NQY0	253 aa		5.65	□□□□□ -1.5
ITSN1-222	ENST00000462212	TRAV8-6	A0A0B4J262	113 aa		5.64	□□□□□ -1.51
ITSN1-222	ENST00000462212	RAB4B	P61018	213 aa		5.64	□□□□□ -1.51
ITSN1-222	ENST00000462212	NFE4	Q86UQ8	179 aa		5.64	□□□□□ -1.51
ITSN1-222	ENST00000462212	C10orf126	Q8N4M7	172 aa		5.64	□□□□□ -1.51
ITSN1-222	ENST00000462212	OR2D3	Q8NGH3	330 aa		5.64	□□□□□ -1.51
ITSN1-222	ENST00000462212	OR10G8	Q8NGN5	311 aa		5.64	□□□□□ -1.51
ITSN1-222	ENST00000462212	DAZAP1	Q96EP5	407 aa	Known RBP	5.64	□□□□□ -1.51
ITSN1-222	ENST00000462212	TNFRSF18	Q9Y5U5	241 aa		5.64	□□□□□ -1.51
ITSN1-222	ENST00000462212	KIF25-AS1	Q9Y6Z4	181 aa		5.64	□□□□□ -1.51
ITSN1-222	ENST00000462212	MUC21	A0A0G2JKD1	596 aa		5.63	□□□□□ -1.51
ITSN1-222	ENST00000462212	MUC21	A0A140T8X8	626 aa		5.63	□□□□□ -1.51
ITSN1-222	ENST00000462212	LOC105371267	A0A1B0GV96	52 aa		5.63	□□□□□ -1.51
ITSN1-222	ENST00000462212		K7EN84	100 aa		5.63	□□□□□ -1.51
ITSN1-222	ENST00000462212		P01737	135 aa		5.63	□□□□□ -1.51
ITSN1-222	ENST00000462212	GZMB	P10144	247 aa		5.63	□□□□□ -1.51
ITSN1-222	ENST00000462212	OR10J3	Q5JRS4	329 aa		5.63	□□□□□ -1.51
ITSN1-222	ENST00000462212	SPANXN1	Q5VSR9	72 aa		5.63	□□□□□ -1.51
ITSN1-222	ENST00000462212	FER1L6-AS1	Q8NA97	138 aa		5.63	□□□□□ -1.51
ITSN1-222	ENST00000462212	NUDT10	Q8NFP7	164 aa		5.63	□□□□□ -1.51
ITSN1-222	ENST00000462212	OCC1	Q8TAD7	63 aa		5.63	□□□□□ -1.51
ITSN1-222	ENST00000462212	NUDT11	Q96G61	164 aa		5.63	□□□□□ -1.51
ITSN1-222	ENST00000462212	MSRB1	Q9NZV6	116 aa		5.63	□□□□□ -1.51
ITSN1-222	ENST00000462212	LRP1B	Q9NZR2	4599 aa		5.63	□□□□□ -1.51
ITSN1-222	ENST00000462212	TRBV7-3	A0A075B6L6	115 aa		5.62	□□□□□ -1.51
ITSN1-222	ENST00000462212		A0A087WWC5	75 aa		5.62	□□□□□ -1.51
ITSN1-222	ENST00000462212	XKRY2	A2RUG3	117 aa		5.62	□□□□□ -1.51
ITSN1-222	ENST00000462212	IBA57-AS1	B1ANH7	110 aa		5.62	□□□□□ -1.51
ITSN1-222	ENST00000462212		F2Z2F3	143 aa		5.62	□□□□□ -1.51
ITSN1-222	ENST00000462212	CTRL	P40313	264 aa		5.62	□□□□□ -1.51
ITSN1-222	ENST00000462212	UBE2D3	P61077	147 aa		5.62	□□□□□ -1.51
ITSN1-222	ENST00000462212	UBE2D2	P62837	147 aa		5.62	□□□□□ -1.51
ITSN1-222	ENST00000462212	CACNG7	P62955	275 aa		5.62	□□□□□ -1.51
ITSN1-222	ENST00000462212	TOR2A	Q5JU69	321 aa		5.62	□□□□□ -1.51
ITSN1-222	ENST00000462212	AP1S3	Q96PC3	154 aa		5.62	□□□□□ -1.51
ITSN1-222	ENST00000462212	CNFN	Q9BYD5	112 aa		5.62	□□□□□ -1.51
ITSN1-222	ENST00000462212	DNAH5	Q8TE73	4624 aa		5.62	□□□□□ -1.51
ITSN1-222	ENST00000462212	RYR1	P21817	5038 aa		5.62	□□□□□ -1.51
ITSN1-222	ENST00000462212	KRTAP10-2	P60368	255 aa		5.61	□□□□□ -1.51
ITSN1-222	ENST00000462212	RPL36A	P83881	106 aa	Known RBP	5.61	□□□□□ -1.51
ITSN1-222	ENST00000462212	LAGE3	Q14657	143 aa		5.61	□□□□□ -1.51
ITSN1-222	ENST00000462212	ZNF56	Q15929	161 aa		5.61	□□□□□ -1.51
ITSN1-222	ENST00000462212	WDR73	Q6P4I2	378 aa		5.61	□□□□□ -1.51
ITSN1-222	ENST00000462212	LYZL1	Q6UWQ5	148 aa		5.61	□□□□□ -1.51
ITSN1-222	ENST00000462212	FAM231D	Q6ZW35	169 aa		5.61	□□□□□ -1.51
ITSN1-222	ENST00000462212	SPATA12	Q7Z6I5	190 aa		5.61	□□□□□ -1.51
ITSN1-222	ENST00000462212	NEXN-AS1	Q8NBZ9	246 aa		5.61	□□□□□ -1.51
ITSN1-222	ENST00000462212	RPL36AL	Q969Q0	106 aa	Known RBP	5.61	□□□□□ -1.51
ITSN1-222	ENST00000462212	RNASE7	Q9H1E1	156 aa	Known RBP	5.61	□□□□□ -1.51
ITSN1-222	ENST00000462212	RPP21	Q9H633	154 aa	Known RBP	5.61	□□□□□ -1.51
ITSN1-222	ENST00000462212		A0A087WTM6	91 aa		5.6	□□□□□ -1.51
ITSN1-222	ENST00000462212	C16orf90	A8MZG2	172 aa		5.6	□□□□□ -1.51
ITSN1-222	ENST00000462212	SRP19	P09132	144 aa	Known RBP	5.6	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms