RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 TMEM178BH3BS89 294 aa4.48□□□□□ -1.69
CLK1-207ENST00000461981 M0R1W7 72 aa4.48□□□□□ -1.69
CLK1-207ENST00000461981 IGHV3-48P01763 117 aa4.48□□□□□ -1.69
CLK1-207ENST00000461981 CIRBPQ14011 172 aaKnown RBP4.48□□□□□ -1.69
CLK1-207ENST00000461981 FAM104BQ5XKR9 115 aa4.48□□□□□ -1.69
CLK1-207ENST00000461981 C1orf229Q6ZS94 237 aaPredicted RBP4.48□□□□□ -1.69
CLK1-207ENST00000461981 PRO1854Q9UHT4 67 aa4.48□□□□□ -1.69
CLK1-207ENST00000461981 NBR2O15453 112 aa4.48□□□□□ -1.69
CLK1-207ENST00000461981 SPRY2O43597 315 aa4.48□□□□□ -1.69
CLK1-207ENST00000461981 BEAN1Q3B7T3 259 aa4.48□□□□□ -1.69
CLK1-207ENST00000461981 LY6G5BQ8NDX9 201 aa4.48□□□□□ -1.69
CLK1-207ENST00000461981 H7C1H1 209 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 AVPP01185 164 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 ZNF32P17041 273 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 ZNF134P52741 427 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 PROK1P58294 105 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 ATXN8Q156A1 80 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 LYZL1Q6UWQ5 148 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 SMCR5Q8TEV8 140 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 FXYD5Q96DB9 178 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 C17orf77Q96MU5 243 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 SHANK2-AS3Q9BTD1 123 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 DPH3P1Q9H4G8 78 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 ESM1Q9NQ30 184 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 SPANXCQ9NY87 97 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 RP1L1Q8IWN7 2480 aaPredicted RBP4.47□□□□□ -1.69
CLK1-207ENST00000461981 ZNF785A8K8V0 405 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 HLA-DMBP28068 263 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 DUTP33316 252 aaKnown RBP4.47□□□□□ -1.69
CLK1-207ENST00000461981 MSMPQ1L6U9 139 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 C10orf113Q5VZT2 155 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 FAM90A1Q86YD7 464 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 FMC1Q96HJ9 113 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 C16orf92Q96LL3 132 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 METTL26Q96S19 204 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 KLK15Q9H2R5 256 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 TRBV6-6A0A0A6YYG2 114 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 TRBV10-2A0A0K0K1G8 114 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 WNT9BO14905 357 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 TCRAP04437 139 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 Q86TA4 180 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 CD177Q8N6Q3 437 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 LINC00482Q8N8I6 264 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 AGPAT4-IT1Q9H0P7 198 aa4.47□□□□□ -1.69
CLK1-207ENST00000461981 CENPEQ02224 2701 aa4.46□□□□□ -1.69
CLK1-207ENST00000461981 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.46□□□□□ -1.693e-7■■■■■ 27
CLK1-207ENST00000461981 LINC01619G3V211 115 aa4.46□□□□□ -1.7
CLK1-207ENST00000461981 GATA1P15976 413 aaPredicted RBP4.46□□□□□ -1.7
CLK1-207ENST00000461981 PLNP26678 52 aa4.46□□□□□ -1.7
CLK1-207ENST00000461981 LOXL3P58215 753 aa4.46□□□□□ -1.7
CLK1-207ENST00000461981 ZCCHC24Q8N2G6 241 aaKnown RBP4.46□□□□□ -1.7
CLK1-207ENST00000461981 IMUPQ9GZP8 106 aa4.46□□□□□ -1.7
CLK1-207ENST00000461981 TNCP24821 2201 aa4.46□□□□□ -1.7
CLK1-207ENST00000461981 LY6LH3BQJ8 138 aa4.46□□□□□ -1.7
CLK1-207ENST00000461981 Q6ZS46 218 aa4.46□□□□□ -1.7
CLK1-207ENST00000461981 LINC00305Q7Z4B0 112 aa4.46□□□□□ -1.7
CLK1-207ENST00000461981 Q8N8P6 123 aa4.46□□□□□ -1.7
CLK1-207ENST00000461981 KLF14Q8TD94 323 aaPredicted RBP4.46□□□□□ -1.7
CLK1-207ENST00000461981 ZNF580Q9UK33 172 aa4.46□□□□□ -1.7
CLK1-207ENST00000461981 U3KQK5 164 aa4.46□□□□□ -1.7
CLK1-207ENST00000461981 HRNRQ86YZ3 2850 aaPredicted RBP4.45□□□□□ -1.7
CLK1-207ENST00000461981 IGHV1-69DA0A0B4J2H0 117 aa4.45□□□□□ -1.7
CLK1-207ENST00000461981 IGHV1-69P01742 117 aa4.45□□□□□ -1.7
CLK1-207ENST00000461981 EIF4EBP1Q13541 118 aaPredicted RBP4.45□□□□□ -1.7
CLK1-207ENST00000461981 ZNF497Q6ZNH5 498 aa4.45□□□□□ -1.7
CLK1-207ENST00000461981 FAM240AA0A1B0GVK7 77 aa4.45□□□□□ -1.7
CLK1-207ENST00000461981 ZNF503-AS2A6NEH8 195 aa4.45□□□□□ -1.7
CLK1-207ENST00000461981 C12orf77C9JDV5 145 aa4.45□□□□□ -1.7
CLK1-207ENST00000461981 ATOX1O00244 68 aa4.45□□□□□ -1.7
CLK1-207ENST00000461981 ATP5G1P05496 136 aa4.45□□□□□ -1.7
CLK1-207ENST00000461981 PATE2Q6UY27 113 aa4.45□□□□□ -1.7
CLK1-207ENST00000461981 NEXN-AS1Q8NBZ9 246 aa4.45□□□□□ -1.7
CLK1-207ENST00000461981 Q9H3A6 140 aa4.45□□□□□ -1.7
CLK1-207ENST00000461981 BOD1L1Q8NFC6 3051 aa4.45□□□□□ -1.7
CLK1-207ENST00000461981 FREM1Q5H8C1 2179 aa4.45□□□□□ -1.7
CLK1-207ENST00000461981 CCDC168Q8NDH2 2452 aa4.45□□□□□ -1.7
CLK1-207ENST00000461981 H7C423 109 aa4.45□□□□□ -1.7
CLK1-207ENST00000461981 LHBP01229 141 aa4.45□□□□□ -1.7
CLK1-207ENST00000461981 RHOHQ15669 191 aa4.45□□□□□ -1.7
CLK1-207ENST00000461981 COL12A1Q99715 3063 aa4.44□□□□□ -1.7
CLK1-207ENST00000461981 CELSR3Q9NYQ7 3312 aa4.44□□□□□ -1.7
CLK1-207ENST00000461981 F8VRH5 84 aa4.44□□□□□ -1.7
CLK1-207ENST00000461981 IGHV3-33P01772 117 aa4.44□□□□□ -1.7
CLK1-207ENST00000461981 IGHV3-9P01782 118 aa4.44□□□□□ -1.7
CLK1-207ENST00000461981 TFF1P04155 84 aa4.44□□□□□ -1.7
CLK1-207ENST00000461981 HOXA4Q00056 320 aaPredicted RBP4.44□□□□□ -1.7
CLK1-207ENST00000461981 RPL39P5Q59GN2 51 aa4.44□□□□□ -1.7
CLK1-207ENST00000461981 WFDC9Q8NEX5 89 aa4.44□□□□□ -1.7
CLK1-207ENST00000461981 A0A096LPE4 126 aa4.44□□□□□ -1.7
CLK1-207ENST00000461981 A0A1W2PPZ6 126 aa4.44□□□□□ -1.7
CLK1-207ENST00000461981 OOEPA6NGQ2 149 aa4.44□□□□□ -1.7
CLK1-207ENST00000461981 TIRAPP58753 221 aa4.44□□□□□ -1.7
CLK1-207ENST00000461981 MSRB1Q9NZV6 116 aa4.44□□□□□ -1.7
CLK1-207ENST00000461981 EIF4EBP3O60516 100 aaPredicted RBP4.43□□□□□ -1.7
CLK1-207ENST00000461981 IGHV3-30P01768 117 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 IGHV3-30-5P0DP03 117 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 NPC2P61916 151 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 LINC00643Q86TS7 51 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 LINC00596Q86U02 117 aa4.43□□□□□ -1.7
CLK1-207ENST00000461981 ZNRD1Q9P1U0 126 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms