RNA–Protein interactions for RNA: ENST00000461762.5

C9orf78-204, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-204ENST00000461762 TMEM238LA0A1B0GVL6 79 aa11.24□□□□□ -0.61
C9orf78-204ENST00000461762 SDHAF1A6NFY7 115 aa11.24□□□□□ -0.61
C9orf78-204ENST00000461762 A6NJY4 79 aa11.24□□□□□ -0.61
C9orf78-204ENST00000461762 C9orf85Q96MD7 179 aa11.24□□□□□ -0.61
C9orf78-204ENST00000461762 IGHV3-16A0A0C4DH30 117 aa11.24□□□□□ -0.61
C9orf78-204ENST00000461762 SRSF9Q13242 221 aaKnown RBP eCLIP11.24□□□□□ -0.61
C9orf78-204ENST00000461762 ODF3Q96PU9 254 aa11.24□□□□□ -0.61
C9orf78-204ENST00000461762 SPAG8Q99932 426 aaPredicted RBP11.24□□□□□ -0.61
C9orf78-204ENST00000461762 IGHV4-30-2A0A087WSY4 118 aa11.23□□□□□ -0.61
C9orf78-204ENST00000461762 A0A0J9YY99 117 aa11.23□□□□□ -0.61
C9orf78-204ENST00000461762 F5H697 171 aa11.23□□□□□ -0.61
C9orf78-204ENST00000461762 MSMBP08118 114 aa11.23□□□□□ -0.61
C9orf78-204ENST00000461762 EMP1P54849 157 aa11.23□□□□□ -0.61
C9orf78-204ENST00000461762 DEFB104AQ8WTQ1 72 aa11.23□□□□□ -0.61
C9orf78-204ENST00000461762 CCL19Q99731 98 aa11.23□□□□□ -0.61
C9orf78-204ENST00000461762 J3QR89 54 aa11.23□□□□□ -0.61
C9orf78-204ENST00000461762 PSMB8P28062 276 aa11.23□□□□□ -0.61
C9orf78-204ENST00000461762 HERVK_113P61574 105 aa11.23□□□□□ -0.61
C9orf78-204ENST00000461762 ZNF876PQ49A33 203 aa11.23□□□□□ -0.61
C9orf78-204ENST00000461762 AVPP01185 164 aa11.22□□□□□ -0.61
C9orf78-204ENST00000461762 CLEC2AQ6UVW9 174 aa11.22□□□□□ -0.61
C9orf78-204ENST00000461762 ZNRF2Q8NHG8 242 aa11.22□□□□□ -0.61
C9orf78-204ENST00000461762 MRPL16Q9NX20 251 aaKnown RBP11.22□□□□□ -0.61
C9orf78-204ENST00000461762 MDFICQ9P1T7 246 aa11.22□□□□□ -0.61
C9orf78-204ENST00000461762 TSSC4Q9Y5U2 329 aaPredicted RBP11.22□□□□□ -0.61
C9orf78-204ENST00000461762 GAGE12HA6NDE8 117 aa11.21□□□□□ -0.61
C9orf78-204ENST00000461762 MTURNQ8N3F0 131 aa11.21□□□□□ -0.61
C9orf78-204ENST00000461762 SIGMAR1Q99720 223 aa11.21□□□□□ -0.61
C9orf78-204ENST00000461762 A0A0J9YX75 114 aa11.21□□□□□ -0.62
C9orf78-204ENST00000461762 M0QY20 66 aa11.21□□□□□ -0.62
C9orf78-204ENST00000461762 TSPAN13O95857 204 aa11.21□□□□□ -0.62
C9orf78-204ENST00000461762 TSPEAR-AS2P59090 65 aa11.21□□□□□ -0.62
C9orf78-204ENST00000461762 SPTAN1Q13813 2472 aaKnown RBP11.21□□□□□ -0.62
C9orf78-204ENST00000461762 TMEM95Q3KNT9 176 aa11.2□□□□□ -0.62
C9orf78-204ENST00000461762 AMELXQ99217 191 aa11.2□□□□□ -0.62
C9orf78-204ENST00000461762 SPATA25Q9BR10 227 aa11.2□□□□□ -0.62
C9orf78-204ENST00000461762 ZNF688P0C7X2 276 aa11.2□□□□□ -0.62
C9orf78-204ENST00000461762 AZU1P20160 251 aa11.2□□□□□ -0.62
C9orf78-204ENST00000461762 UBE2D3P61077 147 aa11.2□□□□□ -0.62
C9orf78-204ENST00000461762 UBE2D2P62837 147 aa11.2□□□□□ -0.62
C9orf78-204ENST00000461762 SLC25A29Q8N8R3 303 aa11.2□□□□□ -0.62
C9orf78-204ENST00000461762 ATP5J2P56134 94 aa11.19□□□□□ -0.62
C9orf78-204ENST00000461762 CFAP126Q5VTH2 177 aa11.19□□□□□ -0.62
C9orf78-204ENST00000461762 NDUFA11Q86Y39 141 aa11.19□□□□□ -0.62
C9orf78-204ENST00000461762 IGHV3-30P01768 117 aa11.19□□□□□ -0.62
C9orf78-204ENST00000461762 IGHV3-30-5P0DP03 117 aa11.19□□□□□ -0.62
C9orf78-204ENST00000461762 SCGB1A1P11684 91 aa11.19□□□□□ -0.62
C9orf78-204ENST00000461762 SMCPP49901 116 aaPredicted RBP11.19□□□□□ -0.62
C9orf78-204ENST00000461762 NFE4Q86UQ8 179 aa11.19□□□□□ -0.62
C9orf78-204ENST00000461762 Q8N1Y9 231 aa11.19□□□□□ -0.62
C9orf78-204ENST00000461762 DLX4Q92988 240 aaPredicted RBP11.19□□□□□ -0.62
C9orf78-204ENST00000461762 GTSF1LQ9H1H1 148 aa11.19□□□□□ -0.62
C9orf78-204ENST00000461762 TRAV12-2A0A075B6T6 113 aa11.18□□□□□ -0.62
C9orf78-204ENST00000461762 K7EQG2 157 aa11.18□□□□□ -0.62
C9orf78-204ENST00000461762 INSL3P51460 131 aa11.18□□□□□ -0.62
C9orf78-204ENST00000461762 RHOHQ15669 191 aa11.18□□□□□ -0.62
C9orf78-204ENST00000461762 NSUN5P1Q3KNT7 163 aa11.18□□□□□ -0.62
C9orf78-204ENST00000461762 TMEM170BQ5T4T1 132 aa11.18□□□□□ -0.62
C9orf78-204ENST00000461762 FAM74A4Q5TZK3 123 aa11.18□□□□□ -0.62
C9orf78-204ENST00000461762 SYT8Q8NBV8 401 aa11.18□□□□□ -0.62
C9orf78-204ENST00000461762 ZNF256Q9Y2P7 627 aaPredicted RBP11.18□□□□□ -0.62
C9orf78-204ENST00000461762 IGHV1OR15-1A0A075B7D0 117 aa11.17□□□□□ -0.62
C9orf78-204ENST00000461762 P0DMU3 169 aa11.17□□□□□ -0.62
C9orf78-204ENST00000461762 FAM231AP0DMU4 169 aa11.17□□□□□ -0.62
C9orf78-204ENST00000461762 FAM231CP0DMU5 169 aa11.17□□□□□ -0.62
C9orf78-204ENST00000461762 SNRPD3P62318 126 aaKnown RBP11.17□□□□□ -0.62
C9orf78-204ENST00000461762 C10orf99Q6UWK7 81 aa11.17□□□□□ -0.62
C9orf78-204ENST00000461762 TMEM89A2RUT3 159 aa11.17□□□□□ -0.62
C9orf78-204ENST00000461762 J3QQQ9 107 aa11.17□□□□□ -0.62
C9orf78-204ENST00000461762 APOMO95445 188 aa11.17□□□□□ -0.62
C9orf78-204ENST00000461762 IGKV3-20P01619 116 aa11.17□□□□□ -0.62
C9orf78-204ENST00000461762 CFC1BP0CG36 223 aa11.17□□□□□ -0.62
C9orf78-204ENST00000461762 CFC1P0CG37 223 aa11.17□□□□□ -0.62
C9orf78-204ENST00000461762 RNF152Q8N8N0 203 aa11.17□□□□□ -0.62
C9orf78-204ENST00000461762 B4DSR2 109 aa11.16□□□□□ -0.62
C9orf78-204ENST00000461762 TRPT1Q86TN4 253 aaKnown RBP11.16□□□□□ -0.62
C9orf78-204ENST00000461762 ATP6V0E2Q8NHE4 81 aa11.16□□□□□ -0.62
C9orf78-204ENST00000461762 IGHV4-59P01825 116 aa11.16□□□□□ -0.62
C9orf78-204ENST00000461762 ZNF56Q15929 161 aa11.16□□□□□ -0.62
C9orf78-204ENST00000461762 OPRPNQ99935 248 aaPredicted RBP11.16□□□□□ -0.62
C9orf78-204ENST00000461762 ITPR1Q14643 2758 aa11.15□□□□□ -0.62
C9orf78-204ENST00000461762 LOC107984156A0A0G2JMH3 177 aa11.15□□□□□ -0.62
C9orf78-204ENST00000461762 PSMB2P49721 201 aa11.15□□□□□ -0.62
C9orf78-204ENST00000461762 ARL17AQ8IVW1 177 aa11.15□□□□□ -0.62
C9orf78-204ENST00000461762 TMEM223A0PJW6 202 aa11.14□□□□□ -0.63
C9orf78-204ENST00000461762 FOXI1Q12951 378 aa11.14□□□□□ -0.63
C9orf78-204ENST00000461762 C20orf203Q8NBC4 194 aa11.14□□□□□ -0.63
C9orf78-204ENST00000461762 C1QTNF4Q9BXJ3 329 aa11.14□□□□□ -0.63
C9orf78-204ENST00000461762 SMAGPQ0VAQ4 97 aa11.14□□□□□ -0.63
C9orf78-204ENST00000461762 SPINK13Q1W4C9 94 aa11.14□□□□□ -0.63
C9orf78-204ENST00000461762 DEFB112Q30KQ8 113 aa11.14□□□□□ -0.63
C9orf78-204ENST00000461762 SFTA2Q6UW10 78 aa11.14□□□□□ -0.63
C9orf78-204ENST00000461762 COL12A1Q99715 3063 aa11.14□□□□□ -0.63
C9orf78-204ENST00000461762 LEPROTO15243 131 aa11.13□□□□□ -0.63
C9orf78-204ENST00000461762 GATA3P23771 443 aa11.13□□□□□ -0.63
C9orf78-204ENST00000461762 LGALS3P17931 250 aaKnown RBP11.13□□□□□ -0.63
C9orf78-204ENST00000461762 DSCR9P59020 149 aa11.13□□□□□ -0.63
C9orf78-204ENST00000461762 C10orf126Q8N4M7 172 aa11.13□□□□□ -0.63
C9orf78-204ENST00000461762 I3L3M4 83 aa11.12□□□□□ -0.63
C9orf78-204ENST00000461762 LYRM7Q5U5X0 104 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms