RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 C3orf22Q8N5N4 141 aa6.93□□□□□ -1.3
BRCA1-205ENST00000461221 TMEM263Q8WUH6 116 aaKnown RBP6.93□□□□□ -1.3
BRCA1-205ENST00000461221 IGKV2D-26A0A0A0MRZ7 120 aa6.92□□□□□ -1.3
BRCA1-205ENST00000461221 NDUFC2-KCTD14E9PQ53 114 aa6.92□□□□□ -1.3
BRCA1-205ENST00000461221 RSPO1Q2MKA7 263 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-205ENST00000461221 C5orf56Q8N8D9 126 aa6.92□□□□□ -1.3
BRCA1-205ENST00000461221 SMAD5-AS1Q9Y6J3 95 aa6.92□□□□□ -1.3
BRCA1-205ENST00000461221 IGKV1-17P01599 117 aa6.92□□□□□ -1.3
BRCA1-205ENST00000461221 INSL3P51460 131 aa6.92□□□□□ -1.3
BRCA1-205ENST00000461221 TRAV23DV6A0A075B6W5 121 aa6.92□□□□□ -1.3
BRCA1-205ENST00000461221 NFE4Q86UQ8 179 aa6.92□□□□□ -1.3
BRCA1-205ENST00000461221 GREB1LQ9C091 1923 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-205ENST00000461221 HEATR1Q9H583 2144 aaKnown RBP6.92□□□□□ -1.3
BRCA1-205ENST00000461221 IGHV4-61A0A0C4DH41 118 aa6.92□□□□□ -1.3
BRCA1-205ENST00000461221 C20orf203Q8NBC4 194 aa6.92□□□□□ -1.3
BRCA1-205ENST00000461221 MDFICQ9P1T7 246 aa6.92□□□□□ -1.3
BRCA1-205ENST00000461221 SDK2Q58EX2 2172 aa6.91□□□□□ -1.3
BRCA1-205ENST00000461221 HIST2H2BDQ6DRA6 164 aa6.91□□□□□ -1.3
BRCA1-205ENST00000461221 C11orf53Q8IXP5 236 aa6.91□□□□□ -1.3
BRCA1-205ENST00000461221 EP300Q09472 2414 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-205ENST00000461221 UQCRQO14949 82 aa6.91□□□□□ -1.3
BRCA1-205ENST00000461221 ATP5EP56381 51 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-205ENST00000461221 DEFB135Q30KP9 77 aa6.91□□□□□ -1.3
BRCA1-205ENST00000461221 PATE2Q6UY27 113 aa6.91□□□□□ -1.3
BRCA1-205ENST00000461221 NDUFA11Q86Y39 141 aa6.91□□□□□ -1.3
BRCA1-205ENST00000461221 CEP250Q9BV73 2442 aa6.91□□□□□ -1.3
BRCA1-205ENST00000461221 SBF2Q86WG5 1849 aa6.91□□□□□ -1.3
BRCA1-205ENST00000461221 XIRP1Q702N8 1843 aaKnown RBP6.91□□□□□ -1.3
BRCA1-205ENST00000461221 ODF1Q14990 250 aa6.91□□□□□ -1.3
BRCA1-205ENST00000461221 LY6G6EA0A0G2JKS1 128 aa6.9□□□□□ -1.3
BRCA1-205ENST00000461221 Q8N9W7 124 aa6.9□□□□□ -1.3
BRCA1-205ENST00000461221 GTSF1Q8WW33 167 aa6.9□□□□□ -1.3
BRCA1-205ENST00000461221 U3KQA8 63 aa6.9□□□□□ -1.3
BRCA1-205ENST00000461221 WISP1O95388 367 aa6.9□□□□□ -1.3
BRCA1-205ENST00000461221 DOCK11Q5JSL3 2073 aa6.9□□□□□ -1.3
BRCA1-205ENST00000461221 IGHV4-30-2A0A087WSY4 118 aa6.9□□□□□ -1.3
BRCA1-205ENST00000461221 BLCAPP62952 87 aa6.9□□□□□ -1.3
BRCA1-205ENST00000461221 MPLKIPQ8TAP9 179 aa6.9□□□□□ -1.3
BRCA1-205ENST00000461221 HIGD2AQ9BW72 106 aa6.9□□□□□ -1.3
BRCA1-205ENST00000461221 KIAA2026Q5HYC2 2103 aa6.9□□□□□ -1.31
BRCA1-205ENST00000461221 CDPF1Q6NVV7 123 aa6.9□□□□□ -1.31
BRCA1-205ENST00000461221 KMT2EQ8IZD2 1858 aa6.9□□□□□ -1.31
BRCA1-205ENST00000461221 C10orf105Q8TEF2 133 aa6.9□□□□□ -1.31
BRCA1-205ENST00000461221 SLX1AQ9BQ83 275 aa6.9□□□□□ -1.31
BRCA1-205ENST00000461221 PRAC2D3DTV9 90 aa6.89□□□□□ -1.31
BRCA1-205ENST00000461221 NUPR1O60356 82 aa6.89□□□□□ -1.31
BRCA1-205ENST00000461221 PLA2G2CQ5R387 149 aa6.89□□□□□ -1.31
BRCA1-205ENST00000461221 C20orf197Q8N268 126 aa6.89□□□□□ -1.31
BRCA1-205ENST00000461221 H7C423 109 aa6.89□□□□□ -1.31
BRCA1-205ENST00000461221 RNASE8Q8TDE3 154 aaKnown RBP6.89□□□□□ -1.31
BRCA1-205ENST00000461221 FER1L5A0AVI2 2057 aa6.88□□□□□ -1.31
BRCA1-205ENST00000461221 FAM19A1Q7Z5A9 133 aa6.88□□□□□ -1.31
BRCA1-205ENST00000461221 ZFAND2AQ8N6M9 145 aa6.88□□□□□ -1.31
BRCA1-205ENST00000461221 FAM167A-AS1Q96KT0 104 aa6.88□□□□□ -1.31
BRCA1-205ENST00000461221 TTTY13Q9BZ97 58 aa6.88□□□□□ -1.31
BRCA1-205ENST00000461221 PTPRDP23468 1912 aa6.88□□□□□ -1.31
BRCA1-205ENST00000461221 DOPEY2Q9Y3R5 2298 aa6.88□□□□□ -1.31
BRCA1-205ENST00000461221 IGKV2-24A0A0C4DH68 120 aa6.88□□□□□ -1.31
BRCA1-205ENST00000461221 TCL1BO95988 128 aa6.88□□□□□ -1.31
BRCA1-205ENST00000461221 TRAV26-1A0A087WT03 109 aa6.88□□□□□ -1.31
BRCA1-205ENST00000461221 NDUFV3P56181 108 aaKnown RBP6.87□□□□□ -1.31
BRCA1-205ENST00000461221 A0A0J9YX75 114 aa6.87□□□□□ -1.31
BRCA1-205ENST00000461221 NDUFC1O43677 76 aa6.87□□□□□ -1.31
BRCA1-205ENST00000461221 RITA1Q96K30 269 aa6.87□□□□□ -1.31
BRCA1-205ENST00000461221 TRPM7Q96QT4 1865 aa6.87□□□□□ -1.31
BRCA1-205ENST00000461221 A0A0J9YXY3 114 aa6.87□□□□□ -1.31
BRCA1-205ENST00000461221 REG3AQ06141 175 aa6.87□□□□□ -1.31
BRCA1-205ENST00000461221 C11orf45Q8TAV5 145 aa6.87□□□□□ -1.31
BRCA1-205ENST00000461221 SPANXB1Q9NS25 103 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-205ENST00000461221 TET1Q8NFU7 2136 aa6.87□□□□□ -1.31
BRCA1-205ENST00000461221 DEFB4AO15263 64 aa6.86□□□□□ -1.31
BRCA1-205ENST00000461221 SERP1Q9Y6X1 66 aa6.86□□□□□ -1.31
BRCA1-205ENST00000461221 POLEQ07864 2286 aa6.86□□□□□ -1.31
BRCA1-205ENST00000461221 ODF3Q96PU9 254 aa6.86□□□□□ -1.31
BRCA1-205ENST00000461221 CEP290O15078 2479 aa6.86□□□□□ -1.31
BRCA1-205ENST00000461221 HEATR5AQ86XA9 2040 aa6.86□□□□□ -1.31
BRCA1-205ENST00000461221 TDRG1Q3Y452 100 aa6.86□□□□□ -1.31
BRCA1-205ENST00000461221 SPTBN1Q01082 2364 aaKnown RBP6.86□□□□□ -1.31
BRCA1-205ENST00000461221 ZDBF2Q9HCK1 2354 aa6.86□□□□□ -1.31
BRCA1-205ENST00000461221 KRTAP27-1Q3LI81 207 aa6.86□□□□□ -1.31
BRCA1-205ENST00000461221 GRNP28799 593 aaKnown RBP6.85□□□□□ -1.31
BRCA1-205ENST00000461221 SDIM1Q6ZPB5 146 aa6.85□□□□□ -1.31
BRCA1-205ENST00000461221 PTH2Q96A98 100 aa6.85□□□□□ -1.31
BRCA1-205ENST00000461221 LYRM9A8MSI8 78 aa6.85□□□□□ -1.31
BRCA1-205ENST00000461221 IGLC6P0CF74 106 aa6.85□□□□□ -1.31
BRCA1-205ENST00000461221 MAP6D1Q9H9H5 199 aa6.85□□□□□ -1.31
BRCA1-205ENST00000461221 PHF3Q92576 2039 aaKnown RBP6.85□□□□□ -1.31
BRCA1-205ENST00000461221 SMIM9A6NGZ8 99 aa6.85□□□□□ -1.31
BRCA1-205ENST00000461221 PIP4P1Q86T03 277 aa6.85□□□□□ -1.31
BRCA1-205ENST00000461221 SIRPDQ9H106 197 aa6.85□□□□□ -1.31
BRCA1-205ENST00000461221 A0A087WZ39 114 aa6.85□□□□□ -1.31
BRCA1-205ENST00000461221 DAZAP2Q15038 168 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-205ENST00000461221 PI4KAP42356 2102 aa6.85□□□□□ -1.31
BRCA1-205ENST00000461221 ABCA1O95477 2261 aa6.85□□□□□ -1.31
BRCA1-205ENST00000461221 ABCA4P78363 2273 aa6.85□□□□□ -1.31
BRCA1-205ENST00000461221 SPATA12Q7Z6I5 190 aa6.85□□□□□ -1.31
BRCA1-205ENST00000461221 ENHOQ6UWT2 76 aa6.84□□□□□ -1.31
BRCA1-205ENST00000461221 LINC00269Q8N2A0 174 aa6.84□□□□□ -1.31
BRCA1-205ENST00000461221 C19orf71A6NCJ1 209 aa6.84□□□□□ -1.31
BRCA1-205ENST00000461221 ZNF706Q9Y5V0 76 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms