RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 NAA60Q9H7X0 242 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 HIGD1AQ9Y241 93 aa3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 AMMECR1Q9Y4X0 333 aaPredicted RBP3.64□□□□□ -1.83
ATPAF1-203ENST00000460928 IGHV4-4A0A075B6R2 117 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 CTXND1A0A1B0GTU2 59 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 C9JCJ5 164 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 E9PLD3 99 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 G3V318 75 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 CCDC179H3BU77 68 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 APOMO95445 188 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 IGLV2-23P01705 113 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 SLC25A5P05141 298 aaKnown RBP3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 HLA-DRB4P13762 266 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 NTF3P20783 257 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 GATA2P23769 480 aaPredicted RBP3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 DYNLT3P51808 116 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 KRTAP10-5P60370 271 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 HSPE1P61604 102 aaKnown RBP3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 GNB1P62873 340 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 ZNF90Q03938 601 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 MRGPRG-AS1Q2M3A8 158 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 MEIG1Q5JSS6 88 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 C2orf91Q6ZV80 131 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 TMEM86BQ8N661 226 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 C5orf56Q8N8D9 126 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 Q8N9W7 124 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 LINC01006Q8NI28 216 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 RAB37Q96AX2 223 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 FAM218AQ96MZ4 157 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 KCNIP2Q9NS61 270 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 PRO0461Q9UI25 63 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 RCL1Q9Y2P8 373 aaKnown RBP3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 HLA-DRB4X5D2U9 266 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 HYDINQ4G0P3 5121 aa3.63□□□□□ -1.83
ATPAF1-203ENST00000460928 OOSP1A8MZH6 123 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 E7EUB6 86 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 BMPR1BO00238 502 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 PGLYRP1O75594 196 aaPredicted RBP3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 OR2J3O76001 311 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 SNCGO76070 127 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 NCR2O95944 276 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 IGKV1-39P01597 117 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 APCSP02743 223 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 IGKV1D-39P04432 117 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 CD28P10747 220 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 EBI3Q14213 229 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 TMEM30BQ3MIR4 351 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 SPINK9Q5DT21 86 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 ZNF695Q8IW36 515 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 ATOH7Q8N100 152 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 TMEM252Q8N6L7 170 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 OR4C13Q8NGP0 309 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 RASL10AQ92737 203 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 TMEM101Q96IK0 257 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 PRAC1Q96KF2 57 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 PRELID3AQ96N28 172 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 RAB40CQ96S21 281 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 MCRIP2Q9BUT9 160 aaKnown RBP3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 IMUPQ9GZP8 106 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 MOB4Q9Y3A3 225 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 ARL2-SNX15V9GYD0 113 aa3.62□□□□□ -1.83
ATPAF1-203ENST00000460928 IGHV7-81A0A0B4J1V7 117 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 IGHV1-24A0A0C4DH33 117 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 A0A0G2JRQ6 117 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 A0A1B0GV50 99 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 TINCRA0A1B0GVN0 87 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 CLPSL1A2RUU4 121 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 PMS2P5A8MQ11 134 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 LINC01619G3V211 115 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 UQCRQO14949 82 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 NBR2O15453 112 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 ZNF688P0C7X2 276 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 SAA1P0DJI8 122 aaPredicted RBP3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 FGF6P10767 208 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 GP9P14770 177 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 RPL7P18124 248 aaKnown RBP3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 CBLN1P23435 193 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 OPRK1P41145 380 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 TAS2R45P59539 299 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 TMEM187Q14656 261 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 PLGLAQ15195 96 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 ECSCRQ19T08 205 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 ETDBQ3ZM63 59 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 Q56UQ5 140 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 IBA57Q5T440 356 aaKnown RBP3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 LINC01545Q5VT33 79 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 EBLN2Q6P2I7 272 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 APRG1Q8IVJ8 170 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 NPBQ8NG41 125 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 OR5C1Q8NGR4 320 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 MYOZ3Q8TDC0 251 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 TMEM190Q8WZ59 177 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 LINC01600Q96MT4 127 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 LINC01587Q99440 93 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 HSD17B10Q99714 261 aaKnown RBP3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 RASL11BQ9BPW5 248 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 C20orf78Q9BR46 151 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 S4R3C0 116 aa3.61□□□□□ -1.83
ATPAF1-203ENST00000460928 DNAH3Q8TD57 4116 aa3.6□□□□□ -1.83
ATPAF1-203ENST00000460928 TENM3Q9P273 2699 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 180.9 ms