RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 SPINK8P0C7L1 97 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 SMIM6P0DI80 62 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 FXYD4P59646 89 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 NPC2P61916 151 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 RBM3P98179 157 aaKnown RBP0.73□□□□□ -2.29
SYPL1-203ENST00000460770 C9orf116Q5BN46 136 aaPredicted RBP0.73□□□□□ -2.29
SYPL1-203ENST00000460770 C12orf73Q69YU5 71 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 KRTAP5-10Q6L8G5 202 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 C4orf33Q8N1A6 199 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 DEFB119Q8N690 84 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 C10orf105Q8TEF2 133 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 HELZ2Q9BYK8 2649 aaKnown RBP0.73□□□□□ -2.29
SYPL1-203ENST00000460770 FOCADQ5VW36 1801 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 UHRF1BP1LA0JNW5 1464 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 GRIN2AQ12879 1464 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 CASZ1Q86V15 1759 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 KIDINS220Q9ULH0 1771 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 CACNA1BQ00975 2339 aa0.72□□□□□ -2.29
SYPL1-203ENST00000460770 AKAP11Q9UKA4 1901 aa0.72□□□□□ -2.29
SYPL1-203ENST00000460770 SPAARA0A1B0GVQ0 90 aa0.72□□□□□ -2.29
SYPL1-203ENST00000460770 NUPR2A6NF83 97 aa0.72□□□□□ -2.29
SYPL1-203ENST00000460770 PITX3O75364 302 aa0.72□□□□□ -2.29
SYPL1-203ENST00000460770 IGHV3-30P01768 117 aa0.72□□□□□ -2.29
SYPL1-203ENST00000460770 IGHV3-30-5P0DP03 117 aa0.72□□□□□ -2.29
SYPL1-203ENST00000460770 S100A10P60903 97 aa0.72□□□□□ -2.29
SYPL1-203ENST00000460770 HSD52Q0P140 79 aa0.72□□□□□ -2.29
SYPL1-203ENST00000460770 SLC48A1Q6P1K1 146 aa0.72□□□□□ -2.29
SYPL1-203ENST00000460770 NDUFA11Q86Y39 141 aa0.72□□□□□ -2.29
SYPL1-203ENST00000460770 ACBD7Q8N6N7 88 aa0.72□□□□□ -2.29
SYPL1-203ENST00000460770 MYOZ3Q8TDC0 251 aa0.72□□□□□ -2.29
SYPL1-203ENST00000460770 IFI27L1Q96BM0 104 aa0.72□□□□□ -2.29
SYPL1-203ENST00000460770 AQP10Q96PS8 301 aa0.72□□□□□ -2.29
SYPL1-203ENST00000460770 Q9H521 79 aa0.72□□□□□ -2.29
SYPL1-203ENST00000460770 COA4Q9NYJ1 87 aa0.72□□□□□ -2.29
SYPL1-203ENST00000460770 AP4S1Q9Y587 144 aa0.72□□□□□ -2.29
SYPL1-203ENST00000460770 FLG2Q5D862 2391 aaPredicted RBP0.72□□□□□ -2.29
SYPL1-203ENST00000460770 MED13LQ71F56 2210 aa0.71□□□□□ -2.3
SYPL1-203ENST00000460770 TRAV30A0A087WSZ9 112 aa0.71□□□□□ -2.3
SYPL1-203ENST00000460770 TRAV12-3A0A0B4J271 114 aa0.71□□□□□ -2.3
SYPL1-203ENST00000460770 IGLV3-1P01715 115 aa0.71□□□□□ -2.3
SYPL1-203ENST00000460770 LYNX1P0DP58 116 aa0.71□□□□□ -2.3
SYPL1-203ENST00000460770 PDE6GP18545 87 aa0.71□□□□□ -2.3
SYPL1-203ENST00000460770 SNCAP37840 140 aa0.71□□□□□ -2.3
SYPL1-203ENST00000460770 DCDP81605 110 aaKnown RBP0.71□□□□□ -2.3
SYPL1-203ENST00000460770 FAM74A4Q5TZK3 123 aa0.71□□□□□ -2.3
SYPL1-203ENST00000460770 Q6AWC8 147 aa0.71□□□□□ -2.3
SYPL1-203ENST00000460770 CYP2G1PQ6ZSU1 146 aa0.71□□□□□ -2.3
SYPL1-203ENST00000460770 LSM10Q969L4 123 aaKnown RBP0.71□□□□□ -2.3
SYPL1-203ENST00000460770 LINC00526Q96FQ7 95 aa0.71□□□□□ -2.3
SYPL1-203ENST00000460770 AFDNP55196 1824 aaKnown RBP0.71□□□□□ -2.3
SYPL1-203ENST00000460770 KNTC1P50748 2209 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 PHLPP1O60346 1717 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 COL6A6A6NMZ7 2263 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 DOCK11Q5JSL3 2073 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 CFTRP13569 1480 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 ZNF518AQ6AHZ1 1483 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 TRAV13-2A0A0B4J235 113 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 TRBV10-3A0A0K0K1G6 114 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 TEX49A0A1B0GTD5 131 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 CXorf51AA0A1B0GTR3 108 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 LOC101927531A0A1B0GV80 90 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 OOSP1A8MZH6 123 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 FXYD1O00168 92 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 NCR3O14931 201 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 SSSCA1O60232 199 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 PRB1P04280 392 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 LINC00032P0C843 101 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 RPL37AP61513 92 aaKnown RBP0.7□□□□□ -2.3
SYPL1-203ENST00000460770 PKIAP61925 76 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 GNG11P61952 73 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 UBE2L3P68036 154 aaKnown RBP0.7□□□□□ -2.3
SYPL1-203ENST00000460770 SSBP1Q04837 148 aaKnown RBP0.7□□□□□ -2.3
SYPL1-203ENST00000460770 INSL4Q14641 139 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 NCMAPQ5T1S8 102 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 C10orf128Q5T292 105 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 Q6ZS92 163 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 Q6ZSA8 131 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 Q86TA4 180 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 ODF3Q96PU9 254 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 BET1LQ9NYM9 111 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 SCP2D1Q9UJQ7 156 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 C22orf24Q9Y442 160 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 LRP5O75197 1615 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 ERBINQ96RT1 1412 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 PEG3Q9GZU2 1588 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 MYH8P13535 1937 aa0.7□□□□□ -2.3
SYPL1-203ENST00000460770 ABCA1O95477 2261 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 UBE2L5PA0A1B0GUS4 154 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 RBAKDNA6NC62 111 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 HCG22E2RYF7 251 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 PI4KAP42356 2102 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 KRTDAPP60985 99 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 CCL8P80075 99 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 ZNF56Q15929 161 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 COL5A1-AS1Q5SY13 56 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 XAF1Q6GPH4 301 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 Q6ZQY7 126 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 C5orf38Q86SI9 138 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 SBSPONQ8IVN8 264 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 C20orf197Q8N268 126 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms