RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 IGKV2D-26A0A0A0MRZ7 120 aa4.85□□□□□ -1.63
HLA-DQA1-205ENST00000460633 C14orf178Q8N769 122 aaPredicted RBP4.85□□□□□ -1.63
HLA-DQA1-205ENST00000460633 ZFHX3Q15911 3703 aa4.85□□□□□ -1.63
HLA-DQA1-205ENST00000460633 J3KT08 172 aa4.85□□□□□ -1.63
HLA-DQA1-205ENST00000460633 KRTAP27-1Q3LI81 207 aa4.85□□□□□ -1.63
HLA-DQA1-205ENST00000460633 SUMO4Q6EEV6 95 aa4.85□□□□□ -1.63
HLA-DQA1-205ENST00000460633 MRPL35Q9NZE8 188 aaKnown RBP4.85□□□□□ -1.63
HLA-DQA1-205ENST00000460633 Q8N8P6 123 aa4.84□□□□□ -1.63
HLA-DQA1-205ENST00000460633 TMEM263Q8WUH6 116 aaKnown RBP4.84□□□□□ -1.63
HLA-DQA1-205ENST00000460633 IGHV3-73A0A0B4J1V6 119 aa4.84□□□□□ -1.63
HLA-DQA1-205ENST00000460633 C2orf70A6NJV1 201 aa4.84□□□□□ -1.63
HLA-DQA1-205ENST00000460633 IGHV3-30P01768 117 aa4.84□□□□□ -1.63
HLA-DQA1-205ENST00000460633 IGHV3-33P01772 117 aa4.84□□□□□ -1.63
HLA-DQA1-205ENST00000460633 IGHV3-30-3P0DP02 117 aa4.84□□□□□ -1.63
HLA-DQA1-205ENST00000460633 IGHV3-30-5P0DP03 117 aa4.84□□□□□ -1.63
HLA-DQA1-205ENST00000460633 HHLA3Q9XRX5 114 aa4.84□□□□□ -1.63
HLA-DQA1-205ENST00000460633 LTAP01374 205 aa4.84□□□□□ -1.63
HLA-DQA1-205ENST00000460633 LINC01545Q5VT33 79 aa4.84□□□□□ -1.63
HLA-DQA1-205ENST00000460633 H7C423 109 aa4.84□□□□□ -1.64
HLA-DQA1-205ENST00000460633 U3KQE9 123 aa4.84□□□□□ -1.64
HLA-DQA1-205ENST00000460633 C15orf65H3BRN8 121 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 WFDC2Q14508 124 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 SPTSSBQ8NFR3 76 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 ZNF625Q96I27 306 aaPredicted RBP4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 TIMM17AQ99595 171 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 FGF23Q9GZV9 251 aaPredicted RBP4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 CACNA1BQ00975 2339 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 TRBV19A0A075B6N1 114 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 ZNF491Q8N8L2 437 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 PPDPFQ9H3Y8 114 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 C16orf95Q9H693 158 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 ZDBF2Q9HCK1 2354 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 K7ERS5 55 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 SOCS3O14543 225 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 HLA-DRB4P13762 266 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 HLA-DMBP28068 263 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 HLA-DRB4X5D2U9 266 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 KIAA2026Q5HYC2 2103 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 TRBV12-3P01733 135 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 C17orf58Q2M2W7 97 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 C9orf47Q6ZRZ4 202 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 CSDC2Q9Y534 153 aaKnown RBP4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 FAM186AA6NE01 2351 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 IGLV5-52A0A0A0MRZ9 124 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 ODF3BA8MYP8 253 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 TP73-AS1Q9UF72 201 aa4.83□□□□□ -1.64
HLA-DQA1-205ENST00000460633 WT1-ASQ06250 92 aa4.82□□□□□ -1.64
HLA-DQA1-205ENST00000460633 C5orf56Q8N8D9 126 aa4.82□□□□□ -1.64
HLA-DQA1-205ENST00000460633 TRAV4A0A0B4J268 109 aa4.82□□□□□ -1.64
HLA-DQA1-205ENST00000460633 TCL1BO95988 128 aa4.82□□□□□ -1.64
HLA-DQA1-205ENST00000460633 FXYD2P54710 66 aa4.82□□□□□ -1.64
HLA-DQA1-205ENST00000460633 Q6ZR03 302 aa4.82□□□□□ -1.64
HLA-DQA1-205ENST00000460633 SEM1Q6ZVN7 128 aa4.82□□□□□ -1.64
HLA-DQA1-205ENST00000460633 IGHV4OR15-8A0A075B7B6 117 aa4.82□□□□□ -1.64
HLA-DQA1-205ENST00000460633 A0A087WW49 117 aa4.82□□□□□ -1.64
HLA-DQA1-205ENST00000460633 G3V318 75 aa4.82□□□□□ -1.64
HLA-DQA1-205ENST00000460633 FGF6P10767 208 aa4.82□□□□□ -1.64
HLA-DQA1-205ENST00000460633 MORN5Q5VZ52 161 aa4.82□□□□□ -1.64
HLA-DQA1-205ENST00000460633 C2orf66Q6UXQ4 117 aa4.82□□□□□ -1.64
HLA-DQA1-205ENST00000460633 Q6ZSR3 168 aa4.82□□□□□ -1.64
HLA-DQA1-205ENST00000460633 TRBV10-1A0A0K0K1A3 114 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 IGLV2-14P01704 120 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 GAGE2AQ6NT46 116 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 SPATA12Q7Z6I5 190 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 SLC25A29Q8N8R3 303 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 RS1O15537 224 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 ODF3Q96PU9 254 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 TP53TG3Q9ULZ0 132 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 TNRC6AQ8NDV7 1962 aaKnown RBP4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 DOCK9Q9BZ29 2069 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 CPAMD8Q8IZJ3 1885 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 A0A087WWL8 130 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 MED14OSP0DP75 135 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 C20orf78Q9BR46 151 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 TTTY13Q9BZ97 58 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 TPSG1Q9NRR2 321 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 TP53TG1Q9Y2A0 90 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 UBL5Q9BZL1 73 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 PRO1854Q9UHT4 67 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 ESPL1Q14674 2120 aa4.81□□□□□ -1.64
HLA-DQA1-205ENST00000460633 H3BRN7 92 aa4.8□□□□□ -1.64
HLA-DQA1-205ENST00000460633 IGLV2-23P01705 113 aa4.8□□□□□ -1.64
HLA-DQA1-205ENST00000460633 IGHG4P01861 327 aa4.8□□□□□ -1.64
HLA-DQA1-205ENST00000460633 C20orf173Q96LM9 149 aa4.8□□□□□ -1.64
HLA-DQA1-205ENST00000460633 IGHV1-58A0A0C4DH39 117 aa4.8□□□□□ -1.64
HLA-DQA1-205ENST00000460633 A0A0U1RQV1 116 aa4.8□□□□□ -1.64
HLA-DQA1-205ENST00000460633 FAM236DA0A1B0GTK5 79 aa4.8□□□□□ -1.64
HLA-DQA1-205ENST00000460633 FAM236CP0DP71 79 aa4.8□□□□□ -1.64
HLA-DQA1-205ENST00000460633 CTRLP40313 264 aa4.8□□□□□ -1.64
HLA-DQA1-205ENST00000460633 NTN5Q8WTR8 489 aaPredicted RBP4.8□□□□□ -1.64
HLA-DQA1-205ENST00000460633 F8VRH5 84 aa4.8□□□□□ -1.64
HLA-DQA1-205ENST00000460633 RPL28P46779 137 aaKnown RBP4.8□□□□□ -1.64
HLA-DQA1-205ENST00000460633 PCNX2A6NKB5 2137 aa4.8□□□□□ -1.64
HLA-DQA1-205ENST00000460633 A0A087WZ39 114 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 LRCOL1A6NCL2 159 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 UTF1Q5T230 341 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 Q6ZSV7 163 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 ZNF295-AS1Q8N0V1 137 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 SPANXCQ9NY87 97 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 KLK9Q9UKQ9 250 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms