RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 TIMM17AQ99595 171 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 BPESC1Q9GZL8 116 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 SPANXB1Q9NS25 103 aaPredicted RBP4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 NHP2Q9NX24 153 aaKnown RBP4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 CYSLTR1Q9Y271 337 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 PRRC2AP48634 2157 aaKnown RBP4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 NBPF19A0A087WUL8 3843 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 ABCA2Q9BZC7 2435 aa4.62□□□□□ -1.67
UBQLN4-202ENST00000459954 TRAV26-2A0A0B4J265 109 aa4.61□□□□□ -1.67
UBQLN4-202ENST00000459954 IGHV3-66A0A0C4DH42 116 aa4.61□□□□□ -1.67
UBQLN4-202ENST00000459954 TRBV27A0A0K0K1C4 114 aa4.61□□□□□ -1.67
UBQLN4-202ENST00000459954 PRSS29PA6NIE9 313 aa4.61□□□□□ -1.67
UBQLN4-202ENST00000459954 B4DSR2 109 aa4.61□□□□□ -1.67
UBQLN4-202ENST00000459954 LGALS9O00182 355 aa4.61□□□□□ -1.67
UBQLN4-202ENST00000459954 VCYO14598 125 aa4.61□□□□□ -1.67
UBQLN4-202ENST00000459954 HOXA3O43365 443 aaPredicted RBP4.61□□□□□ -1.67
UBQLN4-202ENST00000459954 PRB4P10163 310 aaPredicted RBP4.61□□□□□ -1.67
UBQLN4-202ENST00000459954 RNASE3P12724 160 aaKnown RBP4.61□□□□□ -1.67
UBQLN4-202ENST00000459954 UBE2D1P51668 147 aa4.61□□□□□ -1.67
UBQLN4-202ENST00000459954 LINC00315P59091 139 aa4.61□□□□□ -1.67
UBQLN4-202ENST00000459954 Q96MF0 132 aa4.61□□□□□ -1.67
UBQLN4-202ENST00000459954 VCX2Q9H322 139 aa4.61□□□□□ -1.67
UBQLN4-202ENST00000459954 DAZ1Q9NQZ3 744 aaKnown RBP4.61□□□□□ -1.67
UBQLN4-202ENST00000459954 HIVEP2P31629 2446 aa4.61□□□□□ -1.67
UBQLN4-202ENST00000459954 MTORP42345 2549 aa4.61□□□□□ -1.67
UBQLN4-202ENST00000459954 FLNAP21333 2647 aaKnown RBP4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 CSMD1Q96PZ7 3565 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 IGHV3OR16-13A0A075B7E8 117 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 IGHV3-74A0A0B4J1X5 117 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 IGIPA6NJ69 53 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 C11orf86A6NJI1 115 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 J3QLI3 93 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 LGALS1P09382 135 aaKnown RBP4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 CRYBA4P53673 196 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 CFHR3Q02985 330 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 PMVKQ15126 192 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 RHOHQ15669 191 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 CD300EQ496F6 205 aaPredicted RBP4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 GAGE13Q4V321 117 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 UNQ9165/PRO28630Q6UXU0 137 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 NRGNQ92686 78 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 KIR2DL4Q99706 377 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 SPATA25Q9BR10 227 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 NAA38Q9BRA0 125 aaKnown RBP4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 RHPN1-AS1Q9BWJ2 59 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 TTTY13Q9BZ97 58 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 EDA2RQ9HAV5 297 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 MED13LQ71F56 2210 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 F8P00451 2351 aa4.6□□□□□ -1.67
UBQLN4-202ENST00000459954 TRBV20-1A0A075B6N2 111 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 IGHV3-49A0A0A0MS15 119 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 TEX48A0A1B0GUV7 120 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 H3BMG7 143 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 M0QXV9 152 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 CRYGDP07320 174 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 RNASE4P34096 147 aaKnown RBP4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 TCTAP57738 103 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 RPL24P83731 157 aaKnown RBP4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 NSUN5P1Q3KNT7 163 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 PIK3CD-AS1Q5SR53 167 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 FAM159AQ6UWV7 190 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 ZFP2Q6ZN57 461 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 NFE4Q86UQ8 179 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 KRTAP1-3Q8IUG1 177 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 C14orf178Q8N769 122 aaPredicted RBP4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 LINC01356Q8N9X3 169 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 SYT8Q8NBV8 401 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 WFDC11Q8NEX6 87 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 RPL39LQ96EH5 51 aaKnown RBP4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 C9orf85Q96MD7 179 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 SIGMAR1Q99720 223 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 PRADC1Q9BSG0 188 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 PRO0461Q9UI25 63 aa4.59□□□□□ -1.67
UBQLN4-202ENST00000459954 ZANQ9Y493 2812 aa4.59□□□□□ -1.68
UBQLN4-202ENST00000459954 CSPG4Q6UVK1 2322 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 IGLV4-69A0A075B6H9 119 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 IGHV4-30-2A0A087WSY4 118 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 A0A0J9YX75 114 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 A4D1N5 150 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 ZNF815PA8K554 130 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 TMEM238C9JI98 176 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 K7ERJ3 54 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 GNRH2O43555 120 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 DUSP14O95147 198 aaKnown RBP4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 MGPP08493 103 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 CD7P09564 240 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 UBE2D3P61077 147 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 UBE2D2P62837 147 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 ZNF876PQ49A33 203 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 MORN3Q6PF18 240 aaPredicted RBP4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 Q6ZQT7 251 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 TMEM219Q86XT9 240 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 SBSPONQ8IVN8 264 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 SLC25A29Q8N8R3 303 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 DCANP1Q8TF63 244 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 DLX4Q92988 240 aaPredicted RBP4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 PTH2Q96A98 100 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 LINC01600Q96MT4 127 aa4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 ZNF256Q9Y2P7 627 aaPredicted RBP4.58□□□□□ -1.68
UBQLN4-202ENST00000459954 ACANP16112 2415 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms